Multi-ethnic genome-wide association study for atrial fibrillation

Atrial fibrillation (AF) affects more than 33 million individuals worldwide 1 and has a complex heritability 2 . We conducted the largest meta-analysis of genome-wide association studies (GWAS) for AF to date, consisting of more than half a million individuals, including 65,446 with AF. In total, we...

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Published inNature genetics Vol. 50; no. 9; pp. 1225 - 1233
Main Authors Roselli, Carolina, Chaffin, Mark D., Weng, Lu-Chen, Aeschbacher, Stefanie, Ahlberg, Gustav, Albert, Christine M., Alonso, Alvaro, Anderson, Christopher D., Arking, Dan E., Bartz, Traci M., Benjamin, Emelia J., Bihlmeyer, Nathan A., Bis, Joshua C., Bloom, Heather L., Brody, Jennifer A., Chen, Lin Y., Choi, Eue-Keun, Christophersen, Ingrid E., Conen, David, Cook, James, Damrauer, Scott M., Denny, Joshua C., Dudley, Samuel C., Esko, Tonu, Felix, Stephan B., Franco, Oscar H., Geelhoed, Bastiaan, Grewal, Raji P., Gutmann, Rebecca, Harris, Tamara B., Hofman, Albert, Huang, Jie, Huang, Paul L., Ito, Kaoru, Johnson, Renee, Kääb, Stefan, Kamatani, Yoichiro, Kastrati, Adnan, Katschnig-Winter, Petra, Kessler, Thorsten, Kirchhof, Paulus, Kleber, Marcus E., Kubo, Michiaki, Lin, Henry J., Lindgren, Cecilia M., Loos, Ruth J. F., Lu, Yingchang, Lyytikäinen, Leo-Pekka, Magnusson, Patrik K., Malik, Rainer, Mansur, Alfredo J., Marcus, Gregory M., März, Winfried, Melander, Olle, Müller-Nurasyid, Martina, Nazarian, Saman, Neumann, Benjamin, Newton-Cheh, Christopher, Nilsson, Peter, Noordam, Raymond, Oellers, Heidi, Pak, Hui-Nam, Pedersen, Nancy L., Psaty, Bruce M., Pulit, Sara L., Pullinger, Clive R., Ribasés, Marta, Rienstra, Michiel, Rosand, Jonathan, Rost, Natalia, Saba, Samir, Schramm, Katharina, Schurman, Claudia, Scott, Stuart A., Shaffer, Christian, Shah, Svati, Shalaby, Alaa A., Shim, Jaemin, Shoemaker, M. Benjamin, Sinner, Moritz F., Smith, Albert V., Smith, Blair H., Sun, Han, Tanaka, Toshihiro, Tanriverdi, Kahraman, Taylor, Kent D., Thériault, Sébastien, Trompet, Stella, Tucker, Nathan R., Tveit, Arnljot, Uitterlinden, Andre G., Van Der Harst, Pim, Van Wagoner, David R., Wang, Biqi, Wong, Jorge A., Woo, Daniel, Yoneda, Zachary T., Zeller, Tanja, Zeng, Lingyao, Lubitz, Steven A.
Format Journal Article
LanguageEnglish
Published New York Nature Publishing Group US 01.09.2018
Nature Publishing Group
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Online AccessGet full text
ISSN1061-4036
1546-1718
1546-1718
DOI10.1038/s41588-018-0133-9

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Summary:Atrial fibrillation (AF) affects more than 33 million individuals worldwide 1 and has a complex heritability 2 . We conducted the largest meta-analysis of genome-wide association studies (GWAS) for AF to date, consisting of more than half a million individuals, including 65,446 with AF. In total, we identified 97 loci significantly associated with AF, including 67 that were novel in a combined-ancestry analysis, and 3 that were novel in a European-specific analysis. We sought to identify AF-associated genes at the GWAS loci by performing RNA-sequencing and expression quantitative trait locus analyses in 101 left atrial samples, the most relevant tissue for AF. We also performed transcriptome-wide analyses that identified 57 AF-associated genes, 42 of which overlap with GWAS loci. The identified loci implicate genes enriched within cardiac developmental, electrophysiological, contractile and structural pathways. These results extend our understanding of the biological pathways underlying AF and may facilitate the development of therapeutics for AF. This large, multi-ethnic genome-wide association study identifies 97 loci significantly associated with atrial fibrillation. These loci are enriched for genes involved in cardiac development, electrophysiology, structure and contractile function.
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Drafted and finalized manuscript: C.R., M.D.C., E.J.B., K.L.L., S.A.L., P.T.E., H.L. Contributed to and revised manuscript H.J.C., E.A.D., B.L.K., B.W, S.Kääb, M.M.-N., B.N., K.S., M.F.S., J.L., A.A., L.Y.C., K.L., S.A., D.C., G.P., L. Risch, S.Thériault, T.T., C.Schurman, S.A.S., J.C.D., D.M.R., Q.S.W., C.R., M.D.C., K.G.A., B.R.D., N.G., S.Kathiresan, L.M., P.L.H., J.B., M.K.C., J.D.S., H.Sun, D.R.V.W., T.M.B., J.C.B., J.A.B., G.A., M.S.O., L.Refsgaard, J.H.S., D.F., R.J., S.Shah, P.K., R.B.S., T.E., M.T.-L., E.J.B., B.Wang, K.L.L., M.Kähönen, T.L., I.E.C., I.C.V.G., B.G., M.Rienstra, J.E.S., P.V.D.H., N.V., H.L.B., S.C.D., R.Gutmann, B.L., S.Saba, A.A.S., R.W., H.C., R.N.L., N.L.S., K.L.W., S.R.H., B.M.P., N.S., J.Carlquist, M.J.C., S.Knight, M.E.K., W.M., P.A., O.M., M.O.-M., X.G., H.J.L., J.I.R., K.D.T., S.H.C., N.R.T., S.A.L., P.T.E., C.N.-C., M.A.R., C.D.A., P.N., J.J.G.S., H.Schunkert, T.P.C., K.B.M., I.F., J.J.W.J., P.W.M., R.N., S.Trompet, O.H.F., A.Hofman, M.Kavousi, M.N.N., B.H.Stricker, A.G.U., R.Grewal, J.J.-C., S.L.P., S.M., A.Hamsten, J.P.K., G.M.M., C.R.P., A.P.M., S.G., E.Ingelsson, H.L., D.D., J.A.M., M.M.B.S., Z.T.Y., C.Shaffer, P.E.W., C.M.A., D.I.C., R.K.S., J.W., M.Dichgans, R.M. Contributed to study specific GWAS by providing phenotype data or performing data analyses: H.J.C., E.A.D., B.L.K., B.W, S.Kääb, M.M.-N., B.N., K.S., M.F.S., V.G., T.B.H., L.J.L., A.V.S., M.E., J.Hernesniemi, J.L., I.S., A.A., D.E.A., N.A.B., E.B., L.Y.C., M.L., E.Z.S., S.A., D.C., G.P., L.Risch, S.Thériault, K.I., Y.K., M.Kubo, S.-K.L., T.T., E.B.B., R.J.F.L., Y.L., C.Schurman, S.A.S., J.C.D., D.M.R., Q.S.W., C.R., M.D.C., L.-C.W., K.G.A., N.G., S.Kathiresan, L.M., P.L.H., J.B., M.K.C., J.D.S., H.Sun, D.R.V.W., T.M.B., J.C.B., J.A.B., M.-L.L., J.Sinisalo, E.V., G.A., M.S.O., L.Refsgaard, J.H.S., D.F., R.J., A.Sun, P.K., H.O., R.B.S., T.Z., T.E., M.T.-L., E.J.B., B.Wang, K.L.L., M.Kähönen, T.L., L.-P.L., K.N., I.E.C., A.Tveit, B.G., J.E.S., N.V., H.L.B., S.C.D., R.Gutmann, B.L., S.Saba, A.A.S., R.W., A.C., C.H., L.J.H., J.Huffman, S.P., D.P., B.H.Smith, H.C., E.Ipek, S.N., R.N.L., N.L.S., K.L.W., S.R.H., B.M.P., N.S., J.Carlquist, M.J.C., S.Knight, E.-K.C., H.E.L., H.-N.P., J.Shim, P.-S.Y., G.D., J.Huang, M.E.K., P.A., O.M., M.O.-M., Y.-D.C., X.G., K.D.T., J.Y., S.A.L., P.T.E., C.N.-C., M.A.R., J.R., N.R., C.D.A., P.N., J.J.G.S., A.K., T.K., H.Schunkert, L.Z., T.P.C., S.M.D., K.B.M., M.P.M., D.J.R., I.F., J.J.W.J., S.Trompet, O.H.F., A.Hofman, M.Kavousi, M.N.N., B.H.Stricker, A.G.U., M.Dörr, S.B.F., A.Teumer, U.V., S.W., J.W.C., R.Grewal, J.J.-C., P.K-W, J.P., S.L.P., M.Ribasés, A.Slowik, D.W., B.B.W., A.R.V.R.H., J.E.K., A.J.M., A.P., S.M., A.N., A.Hamsten, P.K.M., N.L.P., J.P.K., G.M.M., C.R.P., J.Cook, L.L., C.M.L., A.M., A.P.M., S.G., E.Ingelsson, N.E., K.T., H.L., D.D.M., D.D., J.A.M., M.M.B.S., Z.T.Y., C.Shaffer, P.E.W., C.M.A., D.I.C., P.M.R., M.Dichgans, R.M. Performed meta analyses: C.R., M.D.C., S.L.P. Contributed samples sequencing or performed left atrial eQTL analyses: N.R.T., P.T.E., T.P.C., K.B.M., M.P.M., H.L. Performed downstream analyses: C.R., M.D.C., L.-C.W., K.L.L., S.H.C., N.R.T., H.L. Conceived designed and supervised the overall project: K.I., T.T., K.L.L., S.R.H., S.A.L., P.T.E.
Author contributions
ISSN:1061-4036
1546-1718
1546-1718
DOI:10.1038/s41588-018-0133-9