Stability of soil microbial structure and activity depends on microbial diversity
Despite the central role of microbes in soil processes, empirical evidence concerning the effect of their diversity on soil stability remains controversial. Here, we addressed the ecological insurance hypothesis by examining the stability of microbial communities along a gradient of soil microbial d...
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Published in | Environmental microbiology reports Vol. 6; no. 2; pp. 173 - 183 |
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Main Authors | , , , , , , , |
Format | Journal Article |
Language | English |
Published |
United States
Blackwell Publishing Ltd
01.04.2014
John Wiley & Sons, Inc Wiley |
Subjects | |
Online Access | Get full text |
ISSN | 1758-2229 1758-2229 |
DOI | 10.1111/1758-2229.12126 |
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Summary: | Despite the central role of microbes in soil processes, empirical evidence concerning the effect of their diversity on soil stability remains controversial. Here, we addressed the ecological insurance hypothesis by examining the stability of microbial communities along a gradient of soil microbial diversity in response to mercury pollution and heat stress. Diversity was manipulated by dilution extinction approach. Structural and functional stabilities of microbial communities were assessed from patterns of genetic structure and soil respiration after the stress. Dilution led to the establishment of a consistent diversity gradient, as revealed by 454 sequencing of ribosomal genes. Diversity stability was enhanced in species‐rich communities whatever the stress whereas functional stability was improved with increasing diversity after heat stress, but not after mercury pollution. This discrepancy implies that the relevance of ecological insurance for soil microbial communities might depend on the type of stress. Our results also suggest that the significance of microbial diversity for soil functional stability might increase with available soil resources. This could have strong repercussions in the current ‘global changes’ context because it suggests that the combined increased frequencies of extreme climatic events, nutrient loading and biotic exploitation may amplify the functional consequences of diversity decrease. |
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Bibliography: | http://dx.doi.org/10.1111/1758-2229.12126 istex:4F4741D500A9247F45A454D093B8F97176559422 Regional Council of Burgundy Agence Nationale de Recherche (ANR) ark:/67375/WNG-3P3DVGRJ-5 European Commission within EcoFINDERS project - No. FP7-264465 Fig. S1. Rarefaction curves determined by pyrosequencing of the (A) 16S- and (B) 18S-rDNA genes obtained for three replicates of each level of diversity, based on randomly selected and filtered sequences. Rarefaction curves were determined using clustering at 95% of similarity.Fig. S2. Factorial map of: (A) bacterial and (B) fungal phylogenetic community composition (phyla) at T0. Monte Carlo tests were performed with 1000 permutations to confirm the significance of the discriminated clusters.Fig. S3. Bacterial-ARISA profiles obtained after 10, 20, 40 and 80 days of incubation for the level of diversity D0. For each sampling date, three replicates of control soils (Ct) and soils spiked with mercury (Hg) were prepared. Arrows indicate significant modifications between profiles (e.g. common bands with different relative abundance).Appendix S1. Experimental procedures. ArticleID:EMI412126 ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 14 content type line 23 |
ISSN: | 1758-2229 1758-2229 |
DOI: | 10.1111/1758-2229.12126 |