Detection of Diabetes through Microarray Genes with Enhancement of Classifiers Performance

• Published in: Diagnostics (Basel) Vol. 13; no. 16; p. 2654
• Main Authors: Chellappan, Dinesh, Rajaguru, Harikumar
• Format: Journal Article
• Language: English
• Published: Basel MDPI AG 01.08.2023; MDPI
• Subjects: Accuracy; Algorithms; Analysis; Chronic diseases; Classification; classifiers; Datasets; Decision trees; Diabetes; Diabetes therapy; Dimensionality Reduction; Distribution (Probability theory); Gene expression; Genes; Hyperglycemia; Machine learning; Mathematical optimization; Optimization techniques; prediction; Regression analysis; Support vector machines; Type 2 diabetes; type II diabetes mellitus; Womens health; India
• ISSN: 2075-4418; 2075-4418
• DOI: 10.3390/diagnostics13162654

Diabetes is a life-threatening, non-communicable disease. Diabetes mellitus is a prevalent chronic disease with a significant global impact. The timely detection of diabetes in patients is necessary for an effective treatment. The primary objective of this study is to propose a novel approach for identifying type II diabetes mellitus using microarray gene data. Specifically, our research focuses on the performance enhancement of methods for detecting diabetes. Four different Dimensionality Reduction techniques, Detrend Fluctuation Analysis (DFA), the Chi-square probability density function (Chi2pdf), the Firefly algorithm, and Cuckoo Search, are used to reduce high dimensional data. Metaheuristic algorithms like Particle Swarm Optimization (PSO) and Harmonic Search (HS) are used for feature selection. Seven classifiers, Non-Linear Regression (NLR), Linear Regression (LR), Logistics Regression (LoR), Gaussian Mixture Model (GMM), Bayesian Linear Discriminant Classifier (BLDC), Softmax Discriminant Classifier (SDC), and Support Vector Machine—Radial Basis Function (SVM-RBF), are utilized to classify the diabetic and non-diabetic classes. The classifiers’ performances are analyzed through parameters such as accuracy, recall, precision, F1 score, error rate, Matthews Correlation Coefficient (MCC), Jaccard metric, and kappa. The SVM (RBF) classifier with the Chi2pdf Dimensionality Reduction technique with a PSO feature selection method attained a high accuracy of 91% with a Kappa of 0.7961, outperforming all of the other classifiers.