High-throughput profiling of posttranslational modification enzymes by phage display
Phage display has been used as a high-throughput platform for identifying proteins or peptides with desired binding or catalytic activities from a complex proteome. Recently, phage display has been applied to profile the catalytic activities of posttranslational modification (PTM) enzymes. Here, we...
Saved in:
Published in | BioTechniques Vol. 43; no. 1; pp. 31 - 37 |
---|---|
Main Authors | , |
Format | Journal Article |
Language | English |
Published |
Natick, MA
Future Science Ltd
01.07.2007
Eaton Taylor & Francis Group |
Subjects | |
Online Access | Get full text |
ISSN | 0736-6205 1940-9818 |
DOI | 10.2144/000112502 |
Cover
Abstract | Phage display has been used as a high-throughput platform for identifying proteins or peptides with desired binding or catalytic activities from a complex proteome. Recently, phage display has been applied to profile the catalytic activities of posttranslational modification (PTM) enzymes. Here, we highlight recent work elucidation the downstream targets of PTM enzymes by phage display, including the genome-wide profiling of biosynthetic enzymes subject to phosphopantetheinyl transferase (PPTase) modification. |
---|---|
AbstractList | Phage display has been used as a high-throughput platform for identifying proteins or peptides with desired binding or catalytic activities from a complex proteome. Recently, phage display has been applied to profile the catalytic activities of posttranslational modification (PTM) enzymes. Here, we highlight recent work elucidation the downstream targets of PTM enzymes by phage display, including the genome-wide profiling of biosynthetic enzymes subject to phosphopantetheinyl transferase (PPTase) modification. Phage display has been used as a high-throughput platform for identifying proteins or peptides with desired binding or catalytic activities from a complex proteome. Recently, phage display has been applied to profile the catalytic activities of posttranslational modification (PTM) enzymes. Here, we highlight recent work elucidating the downstream targets of PTM enzymes by phage display, including the genome-wide profiling of biosynthetic enzymes subject to phosphopantetheinyl transferase (PPTase) modification. Phage display has been used as a high-throughput platform for identifying proteins or peptides with desired binding or catalytic activities from a complex proteome. Recently, phage display has been applied to profile the catalytic activities of posttranslational modification (PTM) enzymes. Here, we highlight recent work elucidating the downstream targets of PTM enzymes by phage display, including the genome-wide profiling of biosynthetic enzymes subject to phosphopantetheinyl transferase (PPTase) modification.Phage display has been used as a high-throughput platform for identifying proteins or peptides with desired binding or catalytic activities from a complex proteome. Recently, phage display has been applied to profile the catalytic activities of posttranslational modification (PTM) enzymes. Here, we highlight recent work elucidating the downstream targets of PTM enzymes by phage display, including the genome-wide profiling of biosynthetic enzymes subject to phosphopantetheinyl transferase (PPTase) modification. |
Author | Yen, Michelle Yin, Jun |
AuthorAffiliation | 1Department of Chemistry, The University of Chicago, Chicago, IL, USA |
AuthorAffiliation_xml | – name: 1Department of Chemistry, The University of Chicago, Chicago, IL, USA |
Author_xml | – sequence: 1 givenname: Michelle surname: Yen fullname: Yen, Michelle – sequence: 2 givenname: Jun surname: Yin fullname: Yin, Jun |
BackLink | http://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=18949137$$DView record in Pascal Francis https://www.ncbi.nlm.nih.gov/pubmed/17695643$$D View this record in MEDLINE/PubMed |
BookMark | eNptkc1u1DAUhS1URKeFBS-AsgGJRaj_Ey9RBbRSJTZlbTnOdcaVEwfbWQxPTzoZWgl1ZV3rO-denXOBzqY4AULvCf5CCedXGGNCqMD0FdoRxXGtWtKeoR1umKwlxeIcXeT8gDHFTaPeoHPSSCUkZzt0f-OHfV32KS7Dfl5KNafofPDTUEVXzTGXksyUgyk-TiZUY-y98_Y4VjD9OYyQq-5QzXszQNX7PAdzeIteOxMyvDu9l-jX92_31zf13c8ft9df72rLJS61YY5JZ52RGINrGOkFWCEY6xllHWektbLjimEjjOhdx0yvLBABpGu4o4xdotvNt4_mQc_JjyYddDReHz9iGrRJxdsAGje8s4xKLiTwrnOKgHCYGqos6bF49Pq0ea0B_F4gFz36bCEEM0FcspYtkeudfAU_nMClG6F_Wvsv0xX4eAJMtia4NT_r8zPXKq4Ia1bu88bZFHNO4J4RrB971U-9ruzVf6z15VjCWo8PLyrEpnBLWRJk62GyoLdpvdtbP8ELur9gvLTJ |
CODEN | BTNQDO |
CitedBy_id | crossref_primary_10_1021_acssynbio_2c00311 crossref_primary_10_3389_fmicb_2016_00429 crossref_primary_10_3390_molecules16021667 crossref_primary_10_1093_glycob_cwq102 crossref_primary_10_1007_s13258_010_0150_2 |
Cites_doi | 10.1038/nprot.2006.43 10.1110/ps.051818406 10.1074/jbc.M513538200 10.1021/ja039198o 10.1073/pnas.1632821100 10.1146/annurev.biochem.70.1.503 10.1006/jmbi.1998.2476 10.1016/j.chembiol.2004.02.010 10.2174/088800199276958 10.1073/pnas.0403413101 10.1073/pnas.0507705102 10.1002/cbic.200300721 10.1021/cr960065d 10.1073/pnas.95.18.10523 10.1038/nbt828 10.1002/anie.200501023 10.1038/nrc1455 10.1146/annurev.biochem.69.1.961 10.1073/pnas.0402784101 10.1021/cr000225s 10.1073/pnas.0403471101 10.1021/cr000406u 10.1016/j.cell.2005.06.026 10.1016/S0968-0896(01)00376-5 10.1110/ps.8.4.921 10.1038/47412 10.1021/cb700054k 10.1038/70736 10.1016/j.chembiol.2007.01.006 10.1016/S1074-5521(96)90181-7 10.1038/nchembio834 10.1016/j.chembiol.2003.11.016 10.1073/pnas.102577799 10.1016/j.jmb.2003.10.081 10.1126/science.275.5302.945 10.1016/S0968-0004(99)01438-3 |
ContentType | Journal Article |
Copyright | 2007 INIST-CNRS |
Copyright_xml | – notice: 2007 INIST-CNRS |
DBID | AAYXX CITATION IQODW CGR CUY CVF ECM EIF NPM 7X8 DOA |
DOI | 10.2144/000112502 |
DatabaseName | CrossRef Pascal-Francis Medline MEDLINE MEDLINE (Ovid) MEDLINE MEDLINE PubMed MEDLINE - Academic DOAJ Directory of Open Access Journals |
DatabaseTitle | CrossRef MEDLINE Medline Complete MEDLINE with Full Text PubMed MEDLINE (Ovid) MEDLINE - Academic |
DatabaseTitleList | MEDLINE MEDLINE - Academic |
Database_xml | – sequence: 1 dbid: DOA name: DOAJ Directory of Open Access Journals url: https://www.doaj.org/ sourceTypes: Open Website – sequence: 2 dbid: NPM name: PubMed url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed sourceTypes: Index Database – sequence: 3 dbid: EIF name: MEDLINE url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search sourceTypes: Index Database |
DeliveryMethod | fulltext_linktorsrc |
Discipline | Medicine Biology |
EISSN | 1940-9818 |
EndPage | 37 |
ExternalDocumentID | oai_doaj_org_article_074bc326456e4bbf91e5f02a29c1d053 17695643 18949137 10_2144_000112502 |
Genre | Research Support, Non-U.S. Gov't Journal Article |
GroupedDBID | - 0VX 23N 4P 53G 55 5GY 5RE 7DE AALRV ABEFU ABFLS ADBBV ADBIT AENEX ALMA_UNASSIGNED_HOLDINGS BCNDV CS3 DU5 EBS EJD F5P FRP FUSOA GJ GROUPED_DOAJ KM L7B OK1 RNS W2D X7M ZA5 ZXP --- .55 .GJ 0YH AAYXX ABCQX ABDPE ADXHL AFFNX CITATION H13 M4Z NEJ TDBHL TR2 TVSSL UDS XBR ZGI ~4P ~KM IQODW 0R~ CGR CUY CVF ECM EIF NPM PKN 7X8 |
ID | FETCH-LOGICAL-c460t-a3f36fcfa600ef731d5ec5533d323b4318c6b4930a5a5dfb3ad9ce15e1b74f233 |
IEDL.DBID | DOA |
ISSN | 0736-6205 |
IngestDate | Wed Aug 27 01:32:06 EDT 2025 Fri Jul 11 15:05:14 EDT 2025 Wed Feb 19 02:41:03 EST 2025 Mon Jul 21 09:16:08 EDT 2025 Thu Apr 24 23:10:11 EDT 2025 Tue Jul 01 01:15:37 EDT 2025 Tue Jan 05 21:59:10 EST 2021 |
IsDoiOpenAccess | true |
IsOpenAccess | true |
IsPeerReviewed | true |
IsScholarly | true |
Issue | 1 |
Keywords | High throughput screening Posttranslational modification Phage display Enzyme |
Language | English |
License | http://creativecommons.org/licenses/by/4.0 CC BY 4.0 |
LinkModel | DirectLink |
MergedId | FETCHMERGED-LOGICAL-c460t-a3f36fcfa600ef731d5ec5533d323b4318c6b4930a5a5dfb3ad9ce15e1b74f233 |
Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 |
OpenAccessLink | https://doaj.org/article/074bc326456e4bbf91e5f02a29c1d053 |
PMID | 17695643 |
PQID | 68166004 |
PQPubID | 23479 |
PageCount | 7 |
ParticipantIDs | doaj_primary_oai_doaj_org_article_074bc326456e4bbf91e5f02a29c1d053 proquest_miscellaneous_68166004 pubmed_primary_17695643 pascalfrancis_primary_18949137 crossref_primary_10_2144_000112502 crossref_citationtrail_10_2144_000112502 futurescience_futuremedicine_10_2144_000112502 |
ProviderPackageCode | FUSOA CITATION AAYXX |
PublicationCentury | 2000 |
PublicationDate | 2007-07-01 |
PublicationDateYYYYMMDD | 2007-07-01 |
PublicationDate_xml | – month: 07 year: 2007 text: 2007-07-01 day: 01 |
PublicationDecade | 2000 |
PublicationPlace | Natick, MA |
PublicationPlace_xml | – name: Natick, MA – name: England |
PublicationTitle | BioTechniques |
PublicationTitleAlternate | Biotechniques |
PublicationYear | 2007 |
Publisher | Future Science Ltd Eaton Taylor & Francis Group |
Publisher_xml | – name: Future Science Ltd – name: Eaton – name: Taylor & Francis Group |
References | e_1_3_2_27_1 e_1_3_2_28_1 e_1_3_2_29_1 e_1_3_2_20_1 e_1_3_2_21_1 e_1_3_2_22_1 e_1_3_2_23_1 e_1_3_2_24_1 e_1_3_2_25_1 e_1_3_2_26_1 e_1_3_2_16_1 e_1_3_2_9_1 e_1_3_2_17_1 e_1_3_2_8_1 e_1_3_2_18_1 e_1_3_2_7_1 e_1_3_2_19_1 e_1_3_2_2_1 e_1_3_2_31_1 e_1_3_2_30_1 e_1_3_2_10_1 e_1_3_2_33_1 e_1_3_2_11_1 e_1_3_2_32_1 e_1_3_2_6_1 e_1_3_2_12_1 e_1_3_2_35_1 e_1_3_2_5_1 e_1_3_2_13_1 e_1_3_2_34_1 e_1_3_2_4_1 e_1_3_2_14_1 e_1_3_2_37_1 e_1_3_2_3_1 e_1_3_2_15_1 e_1_3_2_36_1 |
References_xml | – ident: e_1_3_2_32_1 doi: 10.1038/nprot.2006.43 – ident: e_1_3_2_35_1 doi: 10.1110/ps.051818406 – ident: e_1_3_2_36_1 doi: 10.1074/jbc.M513538200 – ident: e_1_3_2_11_1 doi: 10.1021/ja039198o – ident: e_1_3_2_30_1 doi: 10.1073/pnas.1632821100 – ident: e_1_3_2_21_1 doi: 10.1146/annurev.biochem.70.1.503 – ident: e_1_3_2_7_1 doi: 10.1006/jmbi.1998.2476 – ident: e_1_3_2_33_1 doi: 10.1016/j.chembiol.2004.02.010 – ident: e_1_3_2_37_1 doi: 10.2174/088800199276958 – ident: e_1_3_2_27_1 doi: 10.1073/pnas.0403413101 – ident: e_1_3_2_5_1 doi: 10.1073/pnas.0507705102 – ident: e_1_3_2_26_1 doi: 10.1002/cbic.200300721 – ident: e_1_3_2_2_1 doi: 10.1021/cr960065d – ident: e_1_3_2_9_1 doi: 10.1073/pnas.95.18.10523 – ident: e_1_3_2_6_1 doi: 10.1038/nbt828 – ident: e_1_3_2_14_1 doi: 10.1002/anie.200501023 – ident: e_1_3_2_22_1 doi: 10.1038/nrc1455 – ident: e_1_3_2_24_1 doi: 10.1146/annurev.biochem.69.1.961 – ident: e_1_3_2_28_1 doi: 10.1073/pnas.0402784101 – ident: e_1_3_2_15_1 doi: 10.1021/cr000225s – ident: e_1_3_2_29_1 doi: 10.1073/pnas.0403471101 – ident: e_1_3_2_16_1 doi: 10.1021/cr000406u – ident: e_1_3_2_31_1 doi: 10.1016/j.cell.2005.06.026 – ident: e_1_3_2_25_1 doi: 10.1016/S0968-0896(01)00376-5 – ident: e_1_3_2_4_1 doi: 10.1110/ps.8.4.921 – ident: e_1_3_2_23_1 doi: 10.1038/47412 – ident: e_1_3_2_34_1 doi: 10.1021/cb700054k – ident: e_1_3_2_3_1 doi: 10.1038/70736 – ident: e_1_3_2_13_1 doi: 10.1016/j.chembiol.2007.01.006 – ident: e_1_3_2_18_1 doi: 10.1016/S1074-5521(96)90181-7 – ident: e_1_3_2_20_1 doi: 10.1038/nchembio834 – ident: e_1_3_2_19_1 doi: 10.1016/j.chembiol.2003.11.016 – ident: e_1_3_2_10_1 doi: 10.1073/pnas.102577799 – ident: e_1_3_2_12_1 doi: 10.1016/j.jmb.2003.10.081 – ident: e_1_3_2_8_1 doi: 10.1126/science.275.5302.945 – ident: e_1_3_2_17_1 doi: 10.1016/S0968-0004(99)01438-3 |
SSID | ssj0020779 |
Score | 1.8653374 |
SecondaryResourceType | review_article |
Snippet | Phage display has been used as a high-throughput platform for identifying proteins or peptides with desired binding or catalytic activities from a complex... |
SourceID | doaj proquest pubmed pascalfrancis crossref futurescience |
SourceType | Open Website Aggregation Database Index Database Enrichment Source Publisher |
StartPage | 31 |
SubjectTerms | Acyl Carrier Protein - analysis Bacterial Proteins - metabolism Biological and medical sciences Cloning, Molecular Diverse techniques Enzymes - analysis Fundamental and applied biological sciences. Psychology Molecular and cellular biology Pantetheine - analogs & derivatives Pantetheine - chemistry Peptide Library Peptide Synthases - analysis Polyketide Synthases - analysis Protein Processing, Post-Translational Transferases (Other Substituted Phosphate Groups) - metabolism |
Title | High-throughput profiling of posttranslational modification enzymes by phage display |
URI | http://dx.doi.org/10.2144/000112502 https://www.ncbi.nlm.nih.gov/pubmed/17695643 https://www.proquest.com/docview/68166004 https://doaj.org/article/074bc326456e4bbf91e5f02a29c1d053 |
Volume | 43 |
hasFullText | 1 |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
journalDatabaseRights | – providerCode: PRVAWR databaseName: Taylor & Francis Journals (OA) customDbUrl: eissn: 1940-9818 dateEnd: 99991231 omitProxy: true ssIdentifier: ssj0020779 issn: 0736-6205 databaseCode: 0YH dateStart: 19960101 isFulltext: true titleUrlDefault: https://www.tandfonline.com providerName: Taylor & Francis |
link | http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV1Nb9QwEB1BJRBVhaBASYHFQhy4hMaxHSdHQFQrpHJqpXKK_CmQtknUZA_bX884TrasVMSFYyJHcTxjvzf25A3Aey9z4TVzqSqlTbnRLtXauJSX2lFvSsey8IPz2fdiecG_XYrLP0p9hZywKA8cB-4EIU4b5BgI9I5r7SvqhM9ylVeGWvSgsPoijM3B1BRqZTKq7ElWpEWeiagpFOTBTkYWhMCf7yDRKNi_DwdRyWNCn5AoqXocKx-LXPydhY5odPoEHk80knyK3X8K91xzCA9iYcnNITw8m47Mn8F5yORIp3I83XogsUo3IhZpPenafhgCXK2mTUFy1dqQPTReEtfcbK5cT_SGdD9x5SH2V9-t1OY5XJx-Pf-yTKdSCqnhRTakinlWeOMV8hvnJaNWOCOQ6lmWM40kojSF5hXLlFDCovGUrYyjwlEtuc8ZewF7Tdu4l0AqRnVVGem1tDxTtsSAz4hc5E5ox2mZwId5WGsz6YyHcherGuONYIF6a4EE3m2bdlFc465Gn4Nttg2CHvZ4A72knryk_peXJPBxx7J1vJrzF-5662LH9Lf9KyteUSYTeDv7Qo0zMhyzqMa1674uwlEsrj0JHEUXuX1WFhiOcnb8Pz7pFTya95kz-hr2huu1e4MEadALuJ_9WC7GGfEbKMkNFg |
linkProvider | Directory of Open Access Journals |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=High-throughput+profiling+of+posttranslational+modification+enzymes+by+phage+display&rft.jtitle=BioTechniques&rft.au=Yen%2C+Michelle&rft.au=Yin%2C+Jun&rft.date=2007-07-01&rft.pub=Future+Science+Ltd&rft.issn=0736-6205&rft.eissn=1940-9818&rft.volume=43&rft.issue=1&rft.spage=31&rft.epage=37&rft_id=info:doi/10.2144%2F000112502&rft.externalDocID=10_2144_000112502 |
thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0736-6205&client=summon |
thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0736-6205&client=summon |
thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0736-6205&client=summon |