iTRAQ-based quantitative proteomic analysis of Takifugu fasciatus liver in response to low-temperature stress

• Published in: Journal of proteomics Vol. 201; pp. 27 - 36
• Main Authors: Wen, Xin, Zhang, Xinyu, Hu, Yadong, Xu, Jiejie, Wang, Tao, Yin, Shaowu
• Format: Journal Article
• Language: English
• Published: Netherlands Elsevier B.V 15.06.2019
• Subjects: breeding; cold; cold stress; cold tolerance; ectothermy; energy metabolism; Environmental stress; fish; gap junctions; iTRAQ; liver; Low temperature; mitochondria; mitogen-activated protein kinase; monitoring; oxidative stress; PRM; protein content; proteins; proteome; Proteomics; quantitative polymerase chain reaction; signal transduction; Takifugu; Takifugu fasciatus; temperature; transcription (genetics); Takifugu fasciatus; iTRAQ; PRM; Proteomics; Environmental stress; Low temperature
• ISSN: 1874-3919; 1876-7737
• DOI: 10.1016/j.jprot.2019.04.004

Low temperatures profoundly influence the physiological and behavioural processes of ectotherms, especially teleosts, which have made them the subjects of strong interest over time. However, the characteristics of fish cold-tolerance at the protein level remain unclear. Therefore, to shed further light on the molecular mechanisms of low temperature adaptation in fish, we conducted quantitative proteomics on the T. fasciatus liver using iTRAQ. Comparing the proteomic profiles of the T. fasciatus liver at 12 °C and 26 °C, a total of 3741 proteins were identified, and 160 were differentially abundant proteins (DAPs). Among the DAPs, the most significant changes were noted in proteins involved in oxidative stress (nine proteins), mitochondrial enzymes (eleven proteins) and signal transduction (thirteen proteins). The KEGG enrichment analysis indicated significant enhancement of D-arginine and D-ornithine metabolism, MAPK signalling, Wnt signalling and Gap junction pathway. Subsequently, three significantly up-regulated proteins (CIRB, HSP90 and GST) and two significantly down-regulated proteins (FLNB and A2ML1) were validated with parallel reaction monitoring (PRM) assays. Furthermore, the changes in abundance of proteins that are involved in oxidative stress, mitochondrial enzymes and signal transduction were validated at the transcriptional level with qPCR. These verification results show that the experimental data of iTRAQ are reliable. Our results not only deepen the understanding of the mechanisms underlying low-temperature tolerance in fish, but they also may contribute to the enhancement of cold tolerance during its breeding process. The study focused on a comparative quantitative proteomics analysis of the T. fasciatus liver in response to low temperatures using iTRAQ, which has not yet been reported in the literatures. The results showed that the effect of low temperature on T. fasciatus is significant, including a detoxification of metabolic by-products and oxidative stress, an activation of the mitochondrial enzyme to strengthen energy metabolism, and a negative effect on signal transduction, which result in dysfunction or suboptimal performance. These low-temperature-related changes in the liver proteome of T. fasciatus can facilitate the understanding of the low temperature-related response that takes place in similar conditions in the liver and may contribute to the breeding of cold-resistant strains. [Display omitted] •iTRAQ has been applied for the first time to analyze the protein changes of fish under low temperature stress.•A total of 3741 T. fasciatus liver proteins were identified by iTRAQ.•160 differentially abundant proteins were quantified by iTRAQ analysis under low temperature stress.•The reliability of the results was verified by PRM.•The MAPK pathway plays an important role in low temperature stress at the protein level.