Rapid RNA Folding: Analysis and Acceleration of the Zuker Recurrence - Jacob, Arpith C; Buhler, Jeremy D; Chamberlain, Roger D (2010 18th IEEE Annual International Symposium on Field-Programmable Custom Computing Machines, 2010)
Keywords: Acceleration; Algorithm design and analysis; Bioinformatics; Biological system modeling; Computational biology; Dynamic programming; Field programmable gate arrays; FPGA; Logic arrays; polyhedral model; RNA; RNA secondary structure; Sequences; Zuker