ComBat Harmonization of Image Reconstruction Parameters to Improve the Repeatability of Radiomics Features
Image reconstruction parameters lead to variability in radiomic features, which challenges repeatability and reproducibility of radiomics features, especially in multicenter clinical trials. To deal with this issue, a number of harmonization techniques were proposed. The aim of the current study was...
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Published in | IEEE conference record - Nuclear Science Symposium & Medical Imaging Conference. pp. 1 - 3 |
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Main Authors | , , , , , , , , |
Format | Conference Proceeding |
Language | English |
Published |
IEEE
16.10.2021
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Subjects | |
Online Access | Get full text |
ISSN | 2577-0829 |
DOI | 10.1109/NSS/MIC44867.2021.9875440 |
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Abstract | Image reconstruction parameters lead to variability in radiomic features, which challenges repeatability and reproducibility of radiomics features, especially in multicenter clinical trials. To deal with this issue, a number of harmonization techniques were proposed. The aim of the current study was to investigate feature domain harmonization to cope with repeatability issues in PET radiomic features. Our study was conducted on a thorax phantom filled with 18F-FDG to acquire PET/CT images followed by extraction of 56 radiomics features on each of the six phantom lesions. Different reconstruction algorithms, post-processing filters, number of iterations, number of subsets, and matrix sizes were investigated. ComBat harmonization method was applied to these parameters on radiomics features and the results and associated p-values reported using Kruskal-Wallis test with a significance level of 0.05. This test indicated that 2, 25, 8, 26, and 29 features for reconstruction algorithms, post-processing filter, number of iterations, number of subset sand matrix size parameters, respectively, had significant variability (all p-values <0.05) before harmonization. These were reduced to 0, 2, 0, 0, and 0 features, respectively. The results of our study indicate that the repeatability of PET radiomics features among several image reconstruction parameters might be improved with the help of harmonization methods and could further support multi-institutional studies. |
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AbstractList | Image reconstruction parameters lead to variability in radiomic features, which challenges repeatability and reproducibility of radiomics features, especially in multicenter clinical trials. To deal with this issue, a number of harmonization techniques were proposed. The aim of the current study was to investigate feature domain harmonization to cope with repeatability issues in PET radiomic features. Our study was conducted on a thorax phantom filled with 18F-FDG to acquire PET/CT images followed by extraction of 56 radiomics features on each of the six phantom lesions. Different reconstruction algorithms, post-processing filters, number of iterations, number of subsets, and matrix sizes were investigated. ComBat harmonization method was applied to these parameters on radiomics features and the results and associated p-values reported using Kruskal-Wallis test with a significance level of 0.05. This test indicated that 2, 25, 8, 26, and 29 features for reconstruction algorithms, post-processing filter, number of iterations, number of subset sand matrix size parameters, respectively, had significant variability (all p-values <0.05) before harmonization. These were reduced to 0, 2, 0, 0, and 0 features, respectively. The results of our study indicate that the repeatability of PET radiomics features among several image reconstruction parameters might be improved with the help of harmonization methods and could further support multi-institutional studies. |
Author | Khateri, Maziar Geramifar, Parham Zaidi, Habib Shiri, Isaac Avval, Atlas Haddadi Oveisi, Mehrdad Sabouri, Maziar Jenabi, Elnaz Hajianfar, Ghasem |
Author_xml | – sequence: 1 givenname: Ghasem surname: Hajianfar fullname: Hajianfar, Ghasem email: hajianfar.gh@gmail.com organization: Iran University of Medical Science,Rajaie Cardiovascular Medical and Research Center,Tehran,Iran – sequence: 2 givenname: Atlas Haddadi surname: Avval fullname: Avval, Atlas Haddadi email: atlas.ha78@gmail.com organization: Mashhad University of Medical Sciences,School of Medicine,Mashhad,Iran – sequence: 3 givenname: Maziar surname: Sabouri fullname: Sabouri, Maziar email: mzrsabouri@gmail.com organization: Iran University of Medical Science,Rajaie Cardiovascular Medical and Research Center,Tehran,Iran – sequence: 4 givenname: Maziar surname: Khateri fullname: Khateri, Maziar email: khateri.maziar@gmail.com organization: Islamic Azad University,Science and Research Branch,Department of Medical Radiation Engineering – sequence: 5 givenname: Elnaz surname: Jenabi fullname: Jenabi, Elnaz email: Jenabi.elnaz@gmail.com organization: Tehran University of Medical Sciences,Research Center for Nuclear Medicine, Shariati Hospital,Tehran,Iran – sequence: 6 givenname: Parham surname: Geramifar fullname: Geramifar, Parham email: pgeramifar@gmail.com organization: Tehran University of Medical Sciences,Research Center for Nuclear Medicine, Shariati Hospital,Tehran,Iran – sequence: 7 givenname: Mehrdad surname: Oveisi fullname: Oveisi, Mehrdad email: mehrdad.oveisi@kcl.ac.uk organization: King's College London,London,United Kingdom – sequence: 8 givenname: Isaac surname: Shiri fullname: Shiri, Isaac email: Isaac.shirilord@unige.ch organization: Geneva University Hospital,Division of Nuclear Medicine and Molecular Imaging,Geneva,Switzerland – sequence: 9 givenname: Habib surname: Zaidi fullname: Zaidi, Habib email: habib.zaidi@hcuge.ch organization: Geneva University,Geneva University Neurocenter,Geneva,Switzerland,CH-1205 |
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Snippet | Image reconstruction parameters lead to variability in radiomic features, which challenges repeatability and reproducibility of radiomics features, especially... |
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SubjectTerms | Clinical trials Feature extraction Filtering algorithms Imaging phantoms Lesions Reconstruction algorithms Thorax |
Title | ComBat Harmonization of Image Reconstruction Parameters to Improve the Repeatability of Radiomics Features |
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