SNPrune: an efficient algorithm to prune large SNP array and sequence datasets based on high linkage disequilibrium - Calus, Mario P. L.; Vandenplas, Jérémie (Genetics selection evolution (Paris), 2018)
Keywords: Agriculture; Algorithms; Alleles; Analysis; Animal Breeding & Genomics; Animal Breeding and Genetics; Animal Breeding and Genomics; Animal Genetics and Genomics; Animal models; Bioinformatics; Biological diversity; Biomedical and Life Sciences; Cattle; Computer simulation; Correlation analysis; data collection; Datasets; Evolutionary Biology; Fokkerij & Genomica; Fokkerij en Genetica; Fokkerij en Genomica; Gene loci; Gene polymorphism; Genetic aspects; Genetics; Genomes; Genomics; genotype; Genotypes; Genotyping; Leerstoelgroep Fokkerij en genetica; Life Sciences; Linkage disequilibrium; Livestock; loci; LR - Animal Breeding & Genomics; LR - Genomica; Measurement methods; Nucleotide sequence; Polymorphism; Population; Prediction models; Pruning; rapid methods; Research Article; Single nucleotide polymorphisms; Single-nucleotide polymorphism; Swine; WIAS; Minor Allele; Allelic Phase; Single Nucleotide Polymorphisms (SNPs); Genomic Prediction; Allele Counts