FluShuffle and FluResort: new algorithms to identify reassorted strains of the influenza virus by mass spectrometry - Lun, Aaron TL; Wong, Jason WH; Downard, Kevin M (BMC bioinformatics, 2012)
Keywords: Algorithms; Animals; Automation; Bioinformatics; Biomedical and Life Sciences; Communicable diseases; Computational Biology/Bioinformatics; Computer algorithm; Computer Appl. in Life Sciences; Epidemics; Florida; Humans; Infectious diseases; Influenza; Influenza Vaccines - genetics; Influenza virus; Influenza viruses; Influenza, Human - diagnosis; Influenza, Human - epidemiology; Influenza, Human - virology; Life Sciences; Markov chains; Markov processes; Mass spectra; Mass spectrometry; Mass Spectrometry - statistics & numerical data; Massachusetts; Medical research; Microarrays; Monte Carlo method; Monte Carlo simulation; Orthomyxoviridae - classification; Orthomyxoviridae - genetics; Orthomyxoviridae - isolation & purification; Orthomyxoviridae Infections - epidemiology; Orthomyxoviridae Infections - virology; Pandemics; Phylogenetics; Phylogeny; Proteins; Proteomics; Proteotyping; Public health; Reassortant Viruses - classification; Reassortant Viruses - genetics; Reassortant Viruses - isolation & purification; Reassortment; Sequence Alignment - methods; Sequence Alignment - statistics & numerical data; Sequence Analysis, Protein - methods; Sequence Analysis, Protein - statistics & numerical data; Software; Solomon Islands; Viral proteins; Viral Proteins - chemistry; Viruses; Florida; Massachusetts; Solomon Islands; Phylogenetics; Computer algorithm; Influenza virus; Reassortment; Mass spectrometry; Proteotyping