HMMSplicer: A Tool for Efficient and Sensitive Discovery of Known and Novel Splice Junctions in RNA-Seq Data - Dimon, Michelle T.; Sorber, Katherine; DeRisi, Joseph L. (PloS one, 2010)
Keywords: Acids; Algorithms; Alternative splicing; Animals; Arabidopsis - genetics; Arabidopsis thaliana; Biochemistry; Biophysics; Computational Biology - methods; Computational Biology/Alternative Splicing; Computational Biology/Genomics; Datasets; Erythrocytes; Gene expression; Gene Expression Profiling; Gene mapping; Gene sequencing; Genes; Genomes; Genomics; Humans; Isoforms; Markov analysis; Medical research; Molecular Biology/Bioinformatics; Molecular Biology/RNA Splicing; Next-generation sequencing; Organisms; Plasmodium falciparum; Plasmodium falciparum - genetics; Proteins; Reproducibility of Results; Ribonucleic acid; RNA; RNA sequencing; RNA Splice Sites - genetics; RNA Splicing - genetics; Splice junctions; Statistical analysis; Studies; United States--US; San Francisco California; California