EVpedia: a community web portal for extracellular vesicles research
Motivation: Extracellular vesicles (EVs) are spherical bilayered proteolipids, harboring various bioactive molecules. Due to the complexity of the vesicular nomenclatures and components, online searches for EV-related publications and vesicular components are currently challenging. Results: We prese...
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| Published in | Bioinformatics Vol. 31; no. 6; pp. 933 - 939 |
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| Main Authors | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
| Format | Journal Article |
| Language | English |
| Published |
England
Oxford University Press
15.03.2015
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| Subjects | |
| Online Access | Get full text |
| ISSN | 1367-4803 1367-4811 1367-4811 1460-2059 |
| DOI | 10.1093/bioinformatics/btu741 |
Cover
| Abstract | Motivation: Extracellular vesicles (EVs) are spherical bilayered proteolipids, harboring various bioactive molecules. Due to the complexity of the vesicular nomenclatures and components, online searches for EV-related publications and vesicular components are currently challenging.
Results: We present an improved version of EVpedia, a public database for EVs research. This community web portal contains a database of publications and vesicular components, identification of orthologous vesicular components, bioinformatic tools and a personalized function. EVpedia includes 6879 publications, 172 080 vesicular components from 263 high-throughput datasets, and has been accessed more than 65 000 times from more than 750 cities. In addition, about 350 members from 73 international research groups have participated in developing EVpedia. This free web-based database might serve as a useful resource to stimulate the emerging field of EV research.
Availability and implementation: The web site was implemented in PHP, Java, MySQL and Apache, and is freely available at http://evpedia.info.
Contact: ysgho@postech.ac.kr |
|---|---|
| AbstractList | Motivation: Extracellular vesicles (EVs) are spherical bilayered proteolipids, harboring various bioactive molecules. Due to the complexity of the vesicular nomenclatures and components, online searches for EV-related publications and vesicular components are currently challenging.
Results: We present an improved version of EVpedia, a public database for EVs research. This community web portal contains a database of publications and vesicular components, identification of orthologous vesicular components, bioinformatic tools and a personalized function. EVpedia includes 6879 publications, 172 080 vesicular components from 263 high-throughput datasets, and has been accessed more than 65 000 times from more than 750 cities. In addition, about 350 members from 73 international research groups have participated in developing EVpedia. This free web-based database might serve as a useful resource to stimulate the emerging field of EV research. Motivation: Extracellular vesicles (EVs) are spherical bilayered proteolipids, harboring various bioactive molecules. Due to the complexity of the vesicular nomenclatures and components, online searches for EV-related publications and vesicular components are currently challenging. Results: We present an improved version of EVpedia, a public database for EVs research. This community web portal contains a database of publications and vesicular components, identification of orthologous vesicular components, bioinformatic tools and a personalized function. EVpedia includes 6879 publications, 172 080 vesicular components from 263 high-throughput datasets, and has been accessed more than 65 000 times from more than 750 cities. In addition, about 350 members from 73 international research groups have participated in developing EVpedia. This free web-based database might serve as a useful resource to stimulate the emerging field of EV research. Motivation: Extracellular vesicles (EVs) are spherical bilayered proteolipids, harboring various bioactive molecules. Due to the complexity of the vesicular nomenclatures and components, online searches for EV-related publications and vesicular components are currently challenging.Results: We present an improved version of EVpedia, a public database for EVs research. This community web portal contains a database of publications and vesicular components, identification of orthologous vesicular components, bioinformatic tools and a personalized function. EVpedia includes 6879 publications, 172 080 vesicular components from 263 high-throughput datasets, and has been accessed more than 65 000 times from more than 750 cities. In addition, about 350 members from 73 international research groups have participated in developing EVpedia. This free web-based database might serve as a useful resource to stimulate the emerging field of EV research.Availability and implementation: The web site was implemented in PHP, Java, MySQL and Apache, and is freely available at http://evpedia.info. Extracellular vesicles (EVs) are spherical bilayered proteolipids, harboring various bioactive molecules. Due to the complexity of the vesicular nomenclatures and components, online searches for EV-related publications and vesicular components are currently challenging.MOTIVATIONExtracellular vesicles (EVs) are spherical bilayered proteolipids, harboring various bioactive molecules. Due to the complexity of the vesicular nomenclatures and components, online searches for EV-related publications and vesicular components are currently challenging.We present an improved version of EVpedia, a public database for EVs research. This community web portal contains a database of publications and vesicular components, identification of orthologous vesicular components, bioinformatic tools and a personalized function. EVpedia includes 6879 publications, 172 080 vesicular components from 263 high-throughput datasets, and has been accessed more than 65 000 times from more than 750 cities. In addition, about 350 members from 73 international research groups have participated in developing EVpedia. This free web-based database might serve as a useful resource to stimulate the emerging field of EV research.RESULTSWe present an improved version of EVpedia, a public database for EVs research. This community web portal contains a database of publications and vesicular components, identification of orthologous vesicular components, bioinformatic tools and a personalized function. EVpedia includes 6879 publications, 172 080 vesicular components from 263 high-throughput datasets, and has been accessed more than 65 000 times from more than 750 cities. In addition, about 350 members from 73 international research groups have participated in developing EVpedia. This free web-based database might serve as a useful resource to stimulate the emerging field of EV research.The web site was implemented in PHP, Java, MySQL and Apache, and is freely available at http://evpedia.info.AVAILABILITY AND IMPLEMENTATIONThe web site was implemented in PHP, Java, MySQL and Apache, and is freely available at http://evpedia.info. Extracellular vesicles are spherical bilayered proteolipids, harboring various bioactive molecules. Due to the complexity of the vesicular nomenclatures and components, online searches for extracellular vesicle-related publications and vesicular components are currently challenging. Motivation: Extracellular vesicles (EVs) are spherical bilayered proteolipids, harboring various bioactive molecules. Due to the complexity of the vesicular nomenclatures and components, online searches for EV-related publications and vesicular components are currently challenging. Results: We present an improved version of EVpedia, a public database for EVs research. This community web portal contains a database of publications and vesicular components, identification of orthologous vesicular components, bioinformatic tools and a personalized function. EVpedia includes 6879 publications, 172 080 vesicular components from 263 high-throughput datasets, and has been accessed more than 65 000 times from more than 750 cities. In addition, about 350 members from 73 international research groups have participated in developing EVpedia. This free web-based database might serve as a useful resource to stimulate the emerging field of EV research. Availability and implementation: The web site was implemented in PHP, Java, MySQL and Apache, and is freely available at http://evpedia.info. Contact: ysgho@postech.ac.kr Motivation: Extracellular vesicles (EVs) are spherical bilayered proteolipids, harboring various bioactive molecules. Due to the complexity of the vesicular nomenclatures and components, online searches for EV-related publications and vesicular components are currently challenging. Results: We present an improved version of EVpedia, a public database for EVs research. This community web portal contains a database of publications and vesicular components, identification of orthologous vesicular components, bioinformatic tools and a personalized function. EVpedia includes 6879 publications, 172 080 vesicular components from 263 high-throughput datasets, and has been accessed more than 65 000 times from more than 750 cities. In addition, about 350 members from 73 international research groups have participated in developing EVpedia. This free web-based database might serve as a useful resource to stimulate the emerging field of EV research. Availability and implementation: The web site was implemented in PHP, Java, MySQL and Apache, and is freely available at http://evpedia.info . Contact: ysgho@postech.ac.kr Extracellular vesicles (EVs) are spherical bilayered proteolipids, harboring various bioactive molecules. Due to the complexity of the vesicular nomenclatures and components, online searches for EV-related publications and vesicular components are currently challenging. We present an improved version of EVpedia, a public database for EVs research. This community web portal contains a database of publications and vesicular components, identification of orthologous vesicular components, bioinformatic tools and a personalized function. EVpedia includes 6879 publications, 172 080 vesicular components from 263 high-throughput datasets, and has been accessed more than 65 000 times from more than 750 cities. In addition, about 350 members from 73 international research groups have participated in developing EVpedia. This free web-based database might serve as a useful resource to stimulate the emerging field of EV research. The web site was implemented in PHP, Java, MySQL and Apache, and is freely available at http://evpedia.info. |
| Author | Go, Gyeongyun Baj-Krzyworzeka, Monika Jørgensen, Malene Di Vizio, Dolores Marcilla, Antonio Jee, Young-Koo Gupta, Dwijendra Lener, Thomas Valadi, Hadi Hong, Kahye Aikawa, Elena Blanc, Lionel Stensballe, Allan Youn, Hyewon Liu, Ming-Lin Nieuwland, Rienk Pang, Ken Buée, Luc Sahoo, Susmita Hwang, Do Won Royo, Felix Kim, Dae-Kyum Seo, Ji Hye Lee, Dong Soo Giebel, Bernd Ramirez, Marcel I. Kim, Yoon-Keun Lötvall, Jan Zeidler, Reinhard Kim, Oh Youn Soekmadji, Carolina Vella, Laura J. Cheng, Lesley Falcon-Perez, Juan M. Kim, Kwang Pyo Belting, Mattias Wai, Sun Nyunt van Leeuwen, Johannes Bongiovanni, Antonella Jagannadham, Medicharla V. Kislinger, Thomas Schiffelers, Raymond Choi, Dong-Sic Cocucci, Emanuele Borràs, Francesc E. Sharma, Shivani Park, Hyun Taek Möller, Andreas del Portillo, Hernando Stępień, Ewa Pocsfalvi, Gabriella Nhung, Dinh Bond, Vincent Buzás, Edit I. Lee, Hakmo Yoon, Yae Jin Ekström, Karin Mathivanan, Suresh Park, Jaesung Lässer, Cecilia Kim, Si-Hyun Rodrigues, Marcio L. Gho, Yong Song Kim, Ji Hyun Inal, Jameel Jayachandran, Muthuvel Kim, |
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| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/25388151$$D View this record in MEDLINE/PubMed https://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-103561$$DView record from Swedish Publication Index https://gup.ub.gu.se/publication/205643$$DView record from Swedish Publication Index |
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| Cites_doi | 10.1002/mas.20175 10.1016/j.jri.2008.06.001 10.1371/journal.pbio.1001450 10.1038/leu.2014.41 10.1093/intimm/dxh267 10.1038/ki.2012.25 10.1002/pmic.201200329 10.1002/pmic.200800109 10.3402/jev.v3.23743 10.3402/jev.v2i0.20360 10.1021/nn402232g 10.1038/ncb1596 10.1016/j.biochi.2006.10.014 10.1161/CIRCGENETICS.108.842849 10.3402/jev.v1i0.18374 10.1101/gad.192351.112 10.1038/mt.2008.1 10.1016/S0092-8674(03)00754-2 10.1517/14712598.5.6.737 10.1002/pmic.200900338 10.3389/fphys.2012.00124 10.1182/blood.V60.4.834.834 10.1016/j.tcb.2008.11.003 10.3402/jev.v2i0.20389 10.1172/JCI119385 10.1371/journal.ppat.1003620 10.1371/journal.pone.0033330 10.3402/jev.v1i0.18396 10.1002/pros.10255 10.1038/ki.2013.502 10.3402/jev.v2i0.20384 10.1038/nri2567 10.1007/s40291-013-0042-7 10.1016/j.scr.2009.12.003 10.1016/j.jacc.2013.03.078 10.1016/j.ceb.2009.03.007 10.1038/nbt.1807 10.1586/epr.09.17 10.1186/1471-2164-11-S1-S6 10.1007/s00792-008-0199-x 10.1002/pros.20860 10.1038/mt.2010.105 10.1126/science.1243457 10.1186/1479-5876-9-9 10.1128/IAI.06014-11 10.1016/j.thromres.2013.12.009 10.1002/pmic.201000422 |
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| References | Alvarez-Erviti (2023020116191966600_btu741-B1) 2011; 29 Raj (2023020116191966600_btu741-B36) 2012; 81 Wai (2023020116191966600_btu741-B48) 2003; 115 Poliakov (2023020116191966600_btu741-B34) 2009; 69 Sun (2023020116191966600_btu741-B44) 2010; 18 Simpson (2023020116191966600_btu741-B42) 2012; 1 Lee (2023020116191966600_btu741-B29) 2008; 27 Cheng (2023020116191966600_btu741-B9) 2014; 86 Lai (2023020116191966600_btu741-B27) 2010; 4 Biller (2023020116191966600_btu741-B5) 2014; 343 Lee (2023020116191966600_btu741-B30) 2009; 9 de Jong (2023020116191966600_btu741-B16) 2012; 1 Sarlon-Bartoli (2023020116191966600_btu741-B37) 2013; 62 Choi (2023020116191966600_btu741-B10) 2013; 17 Subra (2023020116191966600_btu741-B43) 2007; 89 Dai (2023020116191966600_btu741-B15) 2008; 16 George (2023020116191966600_btu741-B20) 1982; 60 Chaput (2023020116191966600_btu741-B7) 2005; 5 Kalra (2023020116191966600_btu741-B23) 2012; 10 Asea (2023020116191966600_btu741-B2) 2008; 79 Raimondo (2023020116191966600_btu741-B35) 2011; 11 Caby (2023020116191966600_btu741-B6) 2005; 17 Shedden (2023020116191966600_btu741-B38) 2003; 63 Mullier (2023020116191966600_btu741-B33) 2013; 133 Koh (2023020116191966600_btu741-B25) 2010; 11 Jang (2023020116191966600_btu741-B22) 2013; 7 Cocucci (2023020116191966600_btu741-B13) 2009; 19 Lee (2023020116191966600_btu741-B31) 2012; 7 Cheng (2023020116191966600_btu741-B8) 2014; 3 Simpson (2023020116191966600_btu741-B41) 2009; 6 Simons (2023020116191966600_btu741-B39) 2009; 21 Kordelas (2023020116191966600_btu741-B26) 2014; 28 Witwer (2023020116191966600_btu741-B49) 2013; 2 Utleg (2023020116191966600_btu741-B46) 2003; 56 Valadi (2023020116191966600_btu741-B47) 2007; 9 Bellingham (2023020116191966600_btu741-B4) 2012; 3 Lässer (2023020116191966600_btu741-B28) 2011; 9 Choi (2023020116191966600_btu741-B12) 2014 Deatherage (2023020116191966600_btu741-B17) 2012; 80 Théry (2023020116191966600_btu741-B45) 2009; 9 Kim (2023020116191966600_btu741-B24) 2013; 2 Ellen (2023020116191966600_btu741-B19) 2009; 13 Simpson (2023020116191966600_btu741-B40) 2008; 8 Duperthuy (2023020116191966600_btu741-B18) 2013; 9 Choi (2023020116191966600_btu741-B11) 2013; 13 Mayr (2023020116191966600_btu741-B32) 2009; 2 D'Souza-Schorey (2023020116191966600_btu741-B14) 2012; 26 Gould (2023020116191966600_btu741-B21) 2013; 2 Barry (2023020116191966600_btu741-B3) 1997; 99 |
| References_xml | – volume: 27 start-page: 535 year: 2008 ident: 2023020116191966600_btu741-B29 article-title: Proteomics in Gram-negative bacterial outer membrane vesicles publication-title: Mass Spectrom. Rev. doi: 10.1002/mas.20175 – volume: 79 start-page: 12 year: 2008 ident: 2023020116191966600_btu741-B2 article-title: Heat shock protein-containing exosomes in mid-trimester amniotic fluids publication-title: J. Reprod. Immunol. doi: 10.1016/j.jri.2008.06.001 – volume: 10 start-page: e1001450 year: 2012 ident: 2023020116191966600_btu741-B23 article-title: Vesiclepedia: a compendium for extracellular vesicles with continuous community annotation publication-title: PLoS Biol. doi: 10.1371/journal.pbio.1001450 – volume: 28 start-page: 970 year: 2014 ident: 2023020116191966600_btu741-B26 article-title: MSC-derived exosomes: a novel tool to treat therapy-refractory graft-versus-host disease publication-title: Leukemia doi: 10.1038/leu.2014.41 – volume: 17 start-page: 879 year: 2005 ident: 2023020116191966600_btu741-B6 article-title: Exosomal-like vesicles are present in human blood plasma publication-title: Int. Immunol. doi: 10.1093/intimm/dxh267 – volume: 81 start-page: 1263 year: 2012 ident: 2023020116191966600_btu741-B36 article-title: A multiplex quantitative proteomics strategy for protein biomarker studies in urinary exosomes publication-title: Kidney Int. doi: 10.1038/ki.2012.25 – volume: 13 start-page: 1554 year: 2013 ident: 2023020116191966600_btu741-B11 article-title: Proteomics, transcriptomics and lipidomics of exosomes and ectosomes publication-title: Proteomics doi: 10.1002/pmic.201200329 – volume: 8 start-page: 4083 year: 2008 ident: 2023020116191966600_btu741-B40 article-title: Proteomic profiling of exosomes: current perspectives publication-title: Proteomics doi: 10.1002/pmic.200800109 – volume: 3 start-page: 23743 year: 2014 ident: 2023020116191966600_btu741-B8 article-title: Exosomes provide a protective and enriched source of miRNA for biomarker profiling compared to intracellular and cell-free blood publication-title: J. Extracell. Vesicles doi: 10.3402/jev.v3.23743 – volume: 2 start-page: 20360 year: 2013 ident: 2023020116191966600_btu741-B49 article-title: Standardization of sample collection, isolation and analysis methods in extracellular vesicle research publication-title: J. Extracell. Vesicles doi: 10.3402/jev.v2i0.20360 – volume: 7 start-page: 7698 year: 2013 ident: 2023020116191966600_btu741-B22 article-title: Bioinspired exosome-mimetic nanovesicles for targeted delivery of chemotherapeutics to malignant tumors publication-title: ACS Nano doi: 10.1021/nn402232g – volume: 9 start-page: 654 year: 2007 ident: 2023020116191966600_btu741-B47 article-title: Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells publication-title: Nat. Cell Biol. doi: 10.1038/ncb1596 – volume: 89 start-page: 205 year: 2007 ident: 2023020116191966600_btu741-B43 article-title: Exosome lipidomics unravels lipid sorting at the level of multivesicular bodies publication-title: Biochimie doi: 10.1016/j.biochi.2006.10.014 – volume: 2 start-page: 379 year: 2009 ident: 2023020116191966600_btu741-B32 article-title: Proteomics, metabolomics, and immunomics on microparticles derived from human atherosclerotic plaques publication-title: Circ. Cardiovasc. Genet. doi: 10.1161/CIRCGENETICS.108.842849 – volume: 1 start-page: 18374 year: 2012 ident: 2023020116191966600_btu741-B42 article-title: ExoCarta as a resource for exosomal research publication-title: J. Extracell. Vesicles doi: 10.3402/jev.v1i0.18374 – volume: 26 start-page: 1287 year: 2012 ident: 2023020116191966600_btu741-B14 article-title: Tumor-derived microvesicles: shedding light on novel microenvironment modulators and prospective cancer biomarkers publication-title: Genes Dev. doi: 10.1101/gad.192351.112 – volume: 16 start-page: 782 year: 2008 ident: 2023020116191966600_btu741-B15 article-title: Phase I clinical trial of autologous ascites-derived exosomes combined with GM-CSF for colorectal cancer publication-title: Mol. Ther. doi: 10.1038/mt.2008.1 – volume: 115 start-page: 25 year: 2003 ident: 2023020116191966600_btu741-B48 article-title: Vesicle-mediated export and assembly of pore-forming oligomers of the enterobacterial ClyA cytotoxin publication-title: Cell doi: 10.1016/S0092-8674(03)00754-2 – volume: 5 start-page: 737 year: 2005 ident: 2023020116191966600_btu741-B7 article-title: The potential of exosomes in immunotherapy publication-title: Expert Opin. Biol. Ther. doi: 10.1517/14712598.5.6.737 – volume: 9 start-page: 5425 year: 2009 ident: 2023020116191966600_btu741-B30 article-title: Gram-positive bacteria produce membrane vesicles: proteomics-based characterization of Staphylococcus aureus-derived membrane vesicles publication-title: Proteomics doi: 10.1002/pmic.200900338 – volume: 3 start-page: 124 year: 2012 ident: 2023020116191966600_btu741-B4 article-title: Exosomes: vehicles for the transfer of toxic proteins associated with neurodegenerative diseases? publication-title: Front. Physiol. doi: 10.3389/fphys.2012.00124 – volume: 60 start-page: 834 year: 1982 ident: 2023020116191966600_btu741-B20 article-title: Isolation of human platelet membrane microparticles from plasma and serum publication-title: Blood doi: 10.1182/blood.V60.4.834.834 – volume: 19 start-page: 43 year: 2009 ident: 2023020116191966600_btu741-B13 article-title: Shedding microvesicles: artefacts no more publication-title: Trends Cell Biol. doi: 10.1016/j.tcb.2008.11.003 – volume: 2 start-page: 20389 year: 2013 ident: 2023020116191966600_btu741-B21 article-title: As we wait: coping with an imperfect nomenclature for extracellular vesicles publication-title: J. Extracell. Vesicles doi: 10.3402/jev.v2i0.20389 – volume: 99 start-page: 2118 year: 1997 ident: 2023020116191966600_btu741-B3 article-title: Transcellular activation of platelets and endothelial cells by bioactive lipids in platelet microparticles publication-title: J. Clin. Invest. doi: 10.1172/JCI119385 – volume: 9 start-page: e1003620 year: 2013 ident: 2023020116191966600_btu741-B18 article-title: Role of the Vibrio cholerae matrix protein Bap1 in cross-resistance to antimicrobial peptides publication-title: PLoS Pathog. doi: 10.1371/journal.ppat.1003620 – volume: 7 start-page: e33330 year: 2012 ident: 2023020116191966600_btu741-B31 article-title: Therapeutic effects of autologous tumor-derived nanovesicles on melanoma growth and metastasis publication-title: PLoS One doi: 10.1371/journal.pone.0033330 – volume: 1 start-page: 18396 year: 2012 ident: 2023020116191966600_btu741-B16 article-title: Cellular stress conditions are reflected in the protein and RNA content of endothelial cell-derived exosomes publication-title: J. Extracell. Vesicles doi: 10.3402/jev.v1i0.18396 – volume: 56 start-page: 150 year: 2003 ident: 2023020116191966600_btu741-B46 article-title: Proteomic analysis of human prostasomes publication-title: Prostate doi: 10.1002/pros.10255 – volume: 86 start-page: 434 year: 2014 ident: 2023020116191966600_btu741-B9 article-title: Characterization and deep sequencing analysis of exosomal and non-exosomal miRNA in human urine publication-title: Kidney Int. doi: 10.1038/ki.2013.502 – year: 2014 ident: 2023020116191966600_btu741-B12 article-title: Proteomics of extracellular vesicles: Exosomes and ectosomes publication-title: Mass Spectrom. Rev. – volume: 2 start-page: 20384 year: 2013 ident: 2023020116191966600_btu741-B24 article-title: EVpedia: an integrated database of high-throughput data for systemic analyses of extracellular vesicles publication-title: J. Extracell. Vesicles doi: 10.3402/jev.v2i0.20384 – volume: 9 start-page: 581 year: 2009 ident: 2023020116191966600_btu741-B45 article-title: Membrane vesicles as conveyors of immune responses publication-title: Nat. Rev. Immunol. doi: 10.1038/nri2567 – volume: 17 start-page: 265 year: 2013 ident: 2023020116191966600_btu741-B10 article-title: Circulating extracellular vesicles in cancer diagnosis and monitoring: an appraisal of clinical potential publication-title: Mol. Diagn. Ther. doi: 10.1007/s40291-013-0042-7 – volume: 4 start-page: 214 year: 2010 ident: 2023020116191966600_btu741-B27 article-title: Exosome secreted by MSC reduces myocardial ischemia/reperfusion injury publication-title: Stem Cell Res. doi: 10.1016/j.scr.2009.12.003 – volume: 62 start-page: 1436 year: 2013 ident: 2023020116191966600_btu741-B37 article-title: Plasmatic level of leukocyte-derived microparticles is associated with unstable plaque in asymptomatic patients with high-grade carotid stenosis publication-title: J. Am. Coll. Cardiol. doi: 10.1016/j.jacc.2013.03.078 – volume: 21 start-page: 575 year: 2009 ident: 2023020116191966600_btu741-B39 article-title: Exosomes—vesicular carriers for intercellular communication publication-title: Curr. Opin. Cell Biol. doi: 10.1016/j.ceb.2009.03.007 – volume: 29 start-page: 341 year: 2011 ident: 2023020116191966600_btu741-B1 article-title: Delivery of siRNA to the mouse brain by systemic injection of targeted exosomes publication-title: Nat. Biotechnol. doi: 10.1038/nbt.1807 – volume: 6 start-page: 267 year: 2009 ident: 2023020116191966600_btu741-B41 article-title: Exosomes: proteomic insights and diagnostic potential publication-title: Expert Rev. Proteomics doi: 10.1586/epr.09.17 – volume: 11 start-page: S6 year: 2010 ident: 2023020116191966600_btu741-B25 article-title: Analysis of deep sequencing microRNA expression profile from human embryonic stem cells derived mesenchymal stem cells reveals possible role of let-7 microRNA family in downstream targeting of hepatic nuclear factor 4 alpha publication-title: BMC Genomics doi: 10.1186/1471-2164-11-S1-S6 – volume: 13 start-page: 67 year: 2009 ident: 2023020116191966600_btu741-B19 article-title: Proteomic analysis of secreted membrane vesicles of archaeal Sulfolobus species reveals the presence of endosome sorting complex components publication-title: Extremophiles doi: 10.1007/s00792-008-0199-x – volume: 69 start-page: 159 year: 2009 ident: 2023020116191966600_btu741-B34 article-title: Structural heterogeneity and protein composition of exosome-like vesicles (prostasomes) in human semen publication-title: Prostate doi: 10.1002/pros.20860 – volume: 18 start-page: 1606 year: 2010 ident: 2023020116191966600_btu741-B44 article-title: A novel nanoparticle drug delivery system: the anti-inflammatory activity of curcumin is enhanced when encapsulated in exosomes publication-title: Mol. Ther. doi: 10.1038/mt.2010.105 – volume: 343 start-page: 183 year: 2014 ident: 2023020116191966600_btu741-B5 article-title: Bacterial vesicles in marine ecosystems publication-title: Science doi: 10.1126/science.1243457 – volume: 63 start-page: 4331 year: 2003 ident: 2023020116191966600_btu741-B38 article-title: Expulsion of small molecules in vesicles shed by cancer cells: association with gene expression and chemosensitivity profiles publication-title: Cancer Res. – volume: 9 start-page: 9 year: 2011 ident: 2023020116191966600_btu741-B28 article-title: Human saliva, plasma and breast milk exosomes contain RNA: uptake by macrophages publication-title: J. Transl. Med. doi: 10.1186/1479-5876-9-9 – volume: 80 start-page: 1948 year: 2012 ident: 2023020116191966600_btu741-B17 article-title: Membrane vesicle release in bacteria, eukaryotes, and archaea: a conserved yet underappreciated aspect of microbial life publication-title: Infect. Immun. doi: 10.1128/IAI.06014-11 – volume: 133 start-page: 1068 year: 2013 ident: 2023020116191966600_btu741-B33 article-title: Platelet microparticle generation assay: a valuable test for immune heparin-induced thrombocytopenia diagnosis publication-title: Thromb. Res. doi: 10.1016/j.thromres.2013.12.009 – volume: 11 start-page: 709 year: 2011 ident: 2023020116191966600_btu741-B35 article-title: Advances in membranous vesicle and exosome proteomics improving biological understanding and biomarker discovery publication-title: Proteomics doi: 10.1002/pmic.201000422 |
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