SOPRA: Scaffolding algorithm for paired reads via statistical optimization - Dayarian, Adel; Michael, Todd P; Sengupta, Anirvan M (BMC bioinformatics, 2010)
Keywords: Algorithms; Applications software; Bacteria - genetics; Bioinformatics; Biomedical and Life Sciences; Computational biology; Computational Biology/Bioinformatics; Computer Appl. in Life Sciences; Contig Mapping; DNA sequencing; Genetic algorithms; Genome, Bacterial; Life Sciences; Microarrays; Nucleotide sequencing; Research Article; Sequence Analysis, DNA - methods; United States; Mate Pair; Insert Size; Markov Random Field Model; Mate Pair Library; Contig Assembly