ShoRAH: estimating the genetic diversity of a mixed sample from next-generation sequencing data - Zagordi, Osvaldo; Bhattacharya, Arnab; Eriksson, Nicholas; Beerenwinkel, Niko (BMC bioinformatics, 2011)
Keywords: Algorithms; Bioinformatics; Biological diversity; Biomedical and Life Sciences; Computational Biology/Bioinformatics; Computer Appl. in Life Sciences; Computer applications; Computer programs; Data processing; Genetic aspects; Genetic diversity; Genetic Variation; High-Throughput Nucleotide Sequencing - economics; High-Throughput Nucleotide Sequencing - methods; HIV - genetics; HIV Infections - virology; Humans; Life Sciences; Microarrays; Neoplasms - genetics; Public software; Sequence analysis (applications); Sequence Analysis, DNA - economics; Sequence Analysis, DNA - methods; Software; United States; Switzerland; Read Length; Local Haplotype; Illumina Genome Analyzer; Local Reconstruction; Maximum Weight Match