Exploring general-purpose protein features for distinguishing enzymes and non-enzymes within the twilight zone - Ruiz-Blanco, Yasser B.; Agüero-Chapin, Guillermin; García-Hernández, Enrique; Álvarez, Orlando; Antunes, Agostinho; Green, James (BMC bioinformatics, 2017)
Keywords: Algorithms; Alignment; Alignment-free protein analysis; Amino acid composition; Amino Acid Sequence; Amino acids; Annotations; Antibodies; Artificial intelligence; Asparagine; Autocorrelation; Bacteria; Bacterial Proteins; Benchmarks; Bioinformatics; Biomedical and Life Sciences; Biopolymers; Classification; Computation; Computational Biology/Bioinformatics; Computer Appl. in Life Sciences; Computer applications; Computer graphics; Computer programs; Data processing; Datasets; Deoxyribonucleic acid; DNA; Enzyme; Enzymes; Enzymes - chemistry; G protein-coupled receptors; Genomes; Glycosylation; Gram-positive bacteria; Graphs; Identification methods; Integration; Life Sciences; Lysozyme; Markov chains; Mass spectrometry; Microarrays; Multiculturalism & pluralism; Multiplication; Peptides; Predictions; Principal components analysis; Probability theory; Property values; ProtDCal; Protein composition; Protein descriptors; Protein structure; Proteins; Proteins - chemistry; Proteome - metabolism; Real estate; Research Article; Residues; Ribonucleic acid; RNA; Sequence Alignment; Sequence Analysis, Protein; Shewanella - metabolism; Software; Structural members; Support Vector Machine; Support vector machines; Three dimensional models; TI2BioP; Topology; Cuba; Germany; Support vector machines; TI2BioP; ProtDCal; Alignment-free protein analysis; Protein descriptors; Enzyme