Purge Haplotigs: allelic contig reassignment for third-gen diploid genome assemblies - Roach, Michael J.; Schmidt, Simon A.; Borneman, Anthony R. (BMC bioinformatics, 2018)
Keywords: Algorithms; Alleles; Annotations; Arabidopsis - genetics; Assemblies; Assembly; Automation; Bioinformatics; Biomedical and Life Sciences; Computational Biology/Bioinformatics; Computer Appl. in Life Sciences; Contig Mapping; Diploidy; Gene sequencing; Genetic variation; Genome, Plant; Genomes; Genomics; Haploidy; Haplotypes; Haplotypes - genetics; Heterogeneity; Heterozygote; High-Throughput Nucleotide Sequencing - methods; Homology; Homozygote; Life Sciences; Microarrays; Overlapping genes; Polymorphic genome; Polymorphism, Single Nucleotide - genetics; Redundant contigs; Reproduction (copying); Scientific software; Sequence analysis (applications); Software; Synteny reduction; Synteny reduction; Redundant contigs; Polymorphic genome