Comparing a few SNP calling algorithms using low-coverage sequencing data - Yu, Xiaoqing; Sun, Shuying (BMC bioinformatics, 2013)
Keywords: Algorithms; Autoimmune diseases; Bioinformatics; Biomedical and Life Sciences; Comparative analysis; Computational Biology - methods; Computational Biology/Bioinformatics; Computer Appl. in Life Sciences; Criteria; Databases, Genetic; Disease; Empirical analysis; Filtering; Filtration; Genetic aspects; Genomes; High-Throughput Nucleotide Sequencing - methods; Humans; Life Sciences; Microarrays; Nucleotides; Polymorphism, Single Nucleotide - genetics; Research Article; Sequence analysis (methods); Sequencing; Single nucleotide polymorphisms; Statistical methods; Studies; GATK; Single-sample; SOAPsnp; SNP calling; Low-coverage; Next generation sequencing; Atlas-SNP2; SAMtools