Immunopeptidomics toolkit library (IPTK): a python-based modular toolbox for analyzing immunopeptidomics data - ElAbd, Hesham; Degenhardt, Frauke; Koudelka, Tomas; Kamps, Ann-Kristin; Tholey, Andreas; Bacher, Petra; Lenz, Tobias L.; Franke, Andre; Wendorff, Mareike (BMC bioinformatics, 2021)
Keywords: Adaptive systems; Algorithms; Analysis; Antigen processing and presentation; Antigens; Bioinformatics; Biomedical and Life Sciences; Computational Biology/Bioinformatics; Computational immunology; Computer Appl. in Life Sciences; Computer programs; Dashboards; Data analysis; Data processing; Experiments; Gene expression; Histocompatibility antigen HLA; Histocompatibility antigens; HLA; HLA histocompatibility antigens; Identification; Immune system; Immunopeptidomics; Information management; Interactive data analysis; Leukocytes; Libraries; Life Sciences; Lymphocytes; Lymphocytes T; Methods; Microarrays; Online tutorials; Peptides; Pipelines; Proteins; Proteomics; Scientific imaging; Software; Software development tools; Source code; Spectrometry; Toolkits; Visualization; Germany; Immunopeptidomics; Computational immunology; Antigen processing and presentation; Interactive data analysis; HLA