Speeding up the core algorithm for the dual calculation of minimal cut sets in large metabolic networks - Klamt, Steffen; Mahadevan, Radhakrishnan; von Kamp, Axel (BMC bioinformatics, 2020)
Keywords: Algorithms; Benchmarks; Bioinformatics; Biological research; Biomedical and Life Sciences; Computational biology; Computational Biology/Bioinformatics; Computational strain design; Computer Appl. in Life Sciences; Computer applications; Constraint-based modeling; Duality; Enumeration; Genomes; Genotype & phenotype; Life Sciences; Mathematical models; Matrix methods; Metabolic engineering; Metabolic networks; Metabolism; Metabolites; Methodology; Methodology Article; Methods; Microarrays; Mixed integer; Networks; Novel computational methods for the analysis of biological systems; Size reduction; Stoichiometric modeling; Germany; Computational strain design; Stoichiometric modeling; Metabolic networks; Metabolic engineering; Duality; Constraint-based modeling; Elementary modes