Global phylogeny of Treponema pallidum lineages reveals recent expansion and spread of contemporary syphilis - Beale, Mathew A.; Marks, Michael; Cole, Michelle J.; Lee, Min-Kuang; Pitt, Rachel; Ruis, Christopher; Balla, Eszter; Crucitti, Tania; Ewens, Michael; Fernández-Naval, Candela; Grankvist, Anna; Guiver, Malcolm; et al. (Nature microbiology, 2021)
Keywords: 45; 45/22; 45/23; 631/114/739; 631/208/457/649; 631/326/107; 631/326/41/2530; 692/699/255/1318; algorithm; Anti-Bacterial Agents - pharmacology; Bayesian analysis; Biomedical and Life Sciences; Dermatologi och venereologi; Dermatology and Venereal Diseases; Drug Resistance, Bacterial; Epidemiology; Genome, Bacterial; Genomes; Humans; Infectious Diseases; Infectious Medicine; Infektionsmedicin; Life Sciences; Macrolides - pharmacology; Medical Microbiology; Microbiology; molecular clock; Parasitology; Phylogeny; Population; Population bottleneck; Population structure; r package; recombination; selection; sequence; strains; Syphilis; Syphilis - microbiology; Treponema pallidum; Treponema pallidum - classification; Treponema pallidum - genetics; Treponema pallidum - isolation & purification; Treponema pallidum - physiology; Virology; visualization; yaws