MicroRNAs miR-30b, miR-30d, and miR-494 Regulate Human Endometrial Receptivity

MicroRNAs (miRNAs) act as important epigenetic posttranscriptional regulators of gene expression. We aimed to gain more understanding of the complex gene expression regulation of endometrial receptivity by analyzing miRNA signatures of fertile human endometria. We set up to analyze miRNA signatures...

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Published inReproductive sciences (Thousand Oaks, Calif.) Vol. 20; no. 3; pp. 308 - 317
Main Authors Altmäe, Signe, Martinez-Conejero, Jose A., Esteban, Francisco J., Ruiz-Alonso, Maria, Stavreus-Evers, Anneli, Horcajadas, Jose A., Salumets, Andres
Format Journal Article
LanguageEnglish
Published Los Angeles, CA SAGE Publications 01.03.2013
Springer International Publishing
Subjects
Adult
Algorithms
Apoptosis
Axon guidance
catenin
Cell proliferation
Data processing
DNA microarrays
Embryology
Endometrium
Endometrium - physiology
epigenetics
Extracellular signal-regulated kinase
Extravasation
Female
Fibroblast growth factor receptor 2
Gene expression
Gene Expression Regulation
Gene Targeting - methods
Humans
Leukocytes
MAP kinase
Medicine & Public Health
MicroRNAs - biosynthesis
miRNA
mRNA
Obstetrics/Perinatology/Midwifery
Original
Original Article
p53 protein
Post-transcription
Reproductive Medicine
Transcription
Transforming growth factor- beta
Wnt protein
miRNA
microarray
endometrial receptivity
female infertility
gene expression
Online AccessGet full text
ISSN1933-7191
1933-7205
1933-7205
DOI10.1177/1933719112453507

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Abstract MicroRNAs (miRNAs) act as important epigenetic posttranscriptional regulators of gene expression. We aimed to gain more understanding of the complex gene expression regulation of endometrial receptivity by analyzing miRNA signatures of fertile human endometria. We set up to analyze miRNA signatures of receptive (LH + 7, n = 4) versus prereceptive (LH + 2, n = 5) endometrium from healthy fertile women. We found hsa-miR-30b and hsa-miR-30d to be significantly upregulated, and hsa-miR-494 and hsa-miR-923 to be downregulated in receptive endometrium. Three algorithms (miRanda, PicTar, and TargetScan) were used for target gene prediction. Functional analyses of the targets using Ingenuity Pathways Analysis and The Database for Annotation, Visualization and Integrated Discovery indicated roles in transcription, cell proliferation and apoptosis, and significant involvement in several relevant pathways, such as axon guidance, Wnt/β-catenin, ERK/MAPK, transforming growth factor β (TGF-β), p53 and leukocyte extravasation. Comparison of predicted miRNA target genes and our previous messenger RNA microarray data resulted in a list of 12 genes, including CAST, CFTR, FGFR2, and LIF that could serve as a panel of genes important for endometrial receptivity. In conclusion, we suggest that a subset of miRNAs and their target genes may play important roles in endometrial receptivity.
AbstractList MicroRNAs (miRNAs) act as important epigenetic posttranscriptional regulators of gene expression. We aimed to gain more understanding of the complex gene expression regulation of endometrial receptivity by analyzing miRNA signatures of fertile human endometria. We set up to analyze miRNA signatures of receptive (LH + 7, n = 4) versus prereceptive (LH + 2, n = 5) endometrium from healthy fertile women. We found hsa-miR-30b and hsa-miR-30d to be significantly upregulated, and hsa-miR-494 and hsa-miR-923 to be downregulated in receptive endometrium. Three algorithms (miRanda, PicTar, and TargetScan) were used for target gene prediction. Functional analyses of the targets using Ingenuity Pathways Analysis and The Database for Annotation, Visualization and Integrated Discovery indicated roles in transcription, cell proliferation and apoptosis, and significant involvement in several relevant pathways, such as axon guidance, Wnt/β-catenin, ERK/MAPK, transforming growth factor β (TGF-β), p53 and leukocyte extravasation. Comparison of predicted miRNA target genes and our previous messenger RNA microarray data resulted in a list of 12 genes, including CAST, CFTR, FGFR2, and LIF that could serve as a panel of genes important for endometrial receptivity. In conclusion, we suggest that a subset of miRNAs and their target genes may play important roles in endometrial receptivity.
MicroRNAs (miRNAs) act as important epigenetic posttranscriptional regulators of gene expression. We aimed to gain more understanding of the complex gene expression regulation of endometrial receptivity by analyzing miRNA signatures of fertile human endometria. We set up to analyze miRNA signatures of receptive (LH + 7, n = 4) versus prereceptive (LH + 2, n = 5) endometrium from healthy fertile women. We found hsa-miR-30b and hsa-miR-30d to be significantly upregulated, and hsa-miR-494 and hsa-miR-923 to be downregulated in receptive endometrium. Three algorithms (miRanda, PicTar, and TargetScan) were used for target gene prediction. Functional analyses of the targets using Ingenuity Pathways Analysis and The Database for Annotation, Visualization and Integrated Discovery indicated roles in transcription, cell proliferation and apoptosis, and significant involvement in several relevant pathways, such as axon guidance, Wnt/β-catenin, ERK/MAPK, transforming growth factor β (TGF-β), p53 and leukocyte extravasation. Comparison of predicted miRNA target genes and our previous messenger RNA microarray data resulted in a list of 12 genes, including CAST , CFTR , FGFR2 , and LIF that could serve as a panel of genes important for endometrial receptivity. In conclusion, we suggest that a subset of miRNAs and their target genes may play important roles in endometrial receptivity.
MicroRNAs (miRNAs) act as important epigenetic posttranscriptional regulators of gene expression. We aimed to gain more understanding of the complex gene expression regulation of endometrial receptivity by analyzing miRNA signatures of fertile human endometria. We set up to analyze miRNA signatures of receptive (LH + 7, n = 4) versus prereceptive (LH + 2, n = 5) endometrium from healthy fertile women. We found hsa-miR-30b and hsa-miR-30d to be significantly upregulated, and hsa-miR-494 and hsa-miR-923 to be downregulated in receptive endometrium. Three algorithms (miRanda, PicTar, and TargetScan) were used for target gene prediction. Functional analyses of the targets using Ingenuity Pathways Analysis and The Database for Annotation, Visualization and Integrated Discovery indicated roles in transcription, cell proliferation and apoptosis, and significant involvement in several relevant pathways, such as axon guidance, Wnt/β-catenin, ERK/MAPK, transforming growth factor β (TGF-β), p53 and leukocyte extravasation. Comparison of predicted miRNA target genes and our previous messenger RNA microarray data resulted in a list of 12 genes, including CAST, CFTR, FGFR2, and LIF that could serve as a panel of genes important for endometrial receptivity. In conclusion, we suggest that a subset of miRNAs and their target genes may play important roles in endometrial receptivity.MicroRNAs (miRNAs) act as important epigenetic posttranscriptional regulators of gene expression. We aimed to gain more understanding of the complex gene expression regulation of endometrial receptivity by analyzing miRNA signatures of fertile human endometria. We set up to analyze miRNA signatures of receptive (LH + 7, n = 4) versus prereceptive (LH + 2, n = 5) endometrium from healthy fertile women. We found hsa-miR-30b and hsa-miR-30d to be significantly upregulated, and hsa-miR-494 and hsa-miR-923 to be downregulated in receptive endometrium. Three algorithms (miRanda, PicTar, and TargetScan) were used for target gene prediction. Functional analyses of the targets using Ingenuity Pathways Analysis and The Database for Annotation, Visualization and Integrated Discovery indicated roles in transcription, cell proliferation and apoptosis, and significant involvement in several relevant pathways, such as axon guidance, Wnt/β-catenin, ERK/MAPK, transforming growth factor β (TGF-β), p53 and leukocyte extravasation. Comparison of predicted miRNA target genes and our previous messenger RNA microarray data resulted in a list of 12 genes, including CAST, CFTR, FGFR2, and LIF that could serve as a panel of genes important for endometrial receptivity. In conclusion, we suggest that a subset of miRNAs and their target genes may play important roles in endometrial receptivity.
MicroRNAs (miRNAs) act as important epigenetic posttranscriptional regulators of gene expression. We aimed to gain more understanding of the complex gene expression regulation of endometrial receptivity by analyzing miRNA signatures of fertile human endometria. We set up to analyze miRNA signatures of receptive (LH + 7, n = 4) versus prereceptive (LH + 2, n = 5) endometrium from healthy fertile women. We found hsa-miR-30b and hsa-miR-30d to be significantly upregulated, and hsa-miR-494 and hsa-miR-923 to be downregulated in receptive endometrium. Three algorithms (miRanda, PicTar, and TargetScan) were used for target gene prediction. Functional analyses of the targets using Ingenuity Pathways Analysis and The Database for Annotation, Visualization and Integrated Discovery indicated roles in transcription, cell proliferation and apoptosis, and significant involvement in several relevant pathways, such as axon guidance, Wnt/ beta -catenin, ERK/MAPK, transforming growth factor beta (TGF- beta ), p53 and leukocyte extravasation. Comparison of predicted miRNA target genes and our previous messenger RNA microarray data resulted in a list of 12 genes, including CAST, CFTR, FGFR2, and LIF that could serve as a panel of genes important for endometrial receptivity. In conclusion, we suggest that a subset of miRNAs and their target genes may play important roles in endometrial receptivity.
Author Stavreus-Evers, Anneli
Martinez-Conejero, Jose A.
Esteban, Francisco J.
Ruiz-Alonso, Maria
Altmäe, Signe
Horcajadas, Jose A.
Salumets, Andres
AuthorAffiliation 5 Department of Women’s and Children’s Health, Uppsala University, Uppsala, Sweden
1 Competence Centre on Reproductive Medicine and Biology, Tartu, Estonia
6 Araid at I+CS, Hospital Miguel Servet, Zaragoza, Spain
3 IVIOMICS, Valencia, Spain
8 Institute of General and Molecular Pathology, University of Tartu, Tartu, Estonia
2 Department of Paediatrics, School of Medicine, University of Granada, Granada, Spain
7 Department of Obstetrics and Gynaecology, University of Tartu, Tartu, Estonia
4 Department of Experimental Biology, University of Jaen, Jaen, Spain
AuthorAffiliation_xml – name: 6 Araid at I+CS, Hospital Miguel Servet, Zaragoza, Spain
– name: 5 Department of Women’s and Children’s Health, Uppsala University, Uppsala, Sweden
– name: 1 Competence Centre on Reproductive Medicine and Biology, Tartu, Estonia
– name: 4 Department of Experimental Biology, University of Jaen, Jaen, Spain
– name: 7 Department of Obstetrics and Gynaecology, University of Tartu, Tartu, Estonia
– name: 8 Institute of General and Molecular Pathology, University of Tartu, Tartu, Estonia
– name: 2 Department of Paediatrics, School of Medicine, University of Granada, Granada, Spain
– name: 3 IVIOMICS, Valencia, Spain
Author_xml – sequence: 1
  givenname: Signe
  surname: Altmäe
  fullname: Altmäe, Signe
– sequence: 2
  givenname: Jose A.
  surname: Martinez-Conejero
  fullname: Martinez-Conejero, Jose A.
– sequence: 3
  givenname: Francisco J.
  surname: Esteban
  fullname: Esteban, Francisco J.
– sequence: 4
  givenname: Maria
  surname: Ruiz-Alonso
  fullname: Ruiz-Alonso, Maria
– sequence: 5
  givenname: Anneli
  surname: Stavreus-Evers
  fullname: Stavreus-Evers, Anneli
– sequence: 6
  givenname: Jose A.
  surname: Horcajadas
  fullname: Horcajadas, Jose A.
– sequence: 7
  givenname: Andres
  surname: Salumets
  fullname: Salumets, Andres
BackLink https://www.ncbi.nlm.nih.gov/pubmed/22902743$$D View this record in MEDLINE/PubMed
https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-185544$$DView record from Swedish Publication Index
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ContentType Journal Article
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Society for Reproductive Investigation 2013
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Issue 3
Keywords miRNA
microarray
endometrial receptivity
female infertility
gene expression
Language English
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PublicationTitle Reproductive sciences (Thousand Oaks, Calif.)
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Snippet MicroRNAs (miRNAs) act as important epigenetic posttranscriptional regulators of gene expression. We aimed to gain more understanding of the complex gene...
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SubjectTerms Adult
Algorithms
Apoptosis
Axon guidance
catenin
Cell proliferation
Data processing
DNA microarrays
Embryology
Endometrium
Endometrium - physiology
epigenetics
Extracellular signal-regulated kinase
Extravasation
Female
Fibroblast growth factor receptor 2
Gene expression
Gene Expression Regulation
Gene Targeting - methods
Humans
Leukocytes
MAP kinase
Medicine & Public Health
MicroRNAs - biosynthesis
miRNA
mRNA
Obstetrics/Perinatology/Midwifery
Original
Original Article
p53 protein
Post-transcription
Reproductive Medicine
Transcription
Transforming growth factor- beta
Wnt protein
Title MicroRNAs miR-30b, miR-30d, and miR-494 Regulate Human Endometrial Receptivity
URI https://journals.sagepub.com/doi/full/10.1177/1933719112453507
https://link.springer.com/article/10.1177/1933719112453507
https://www.ncbi.nlm.nih.gov/pubmed/22902743
https://www.proquest.com/docview/1319182734
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https://pubmed.ncbi.nlm.nih.gov/PMC4077381
https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-185544
https://link.springer.com/content/pdf/10.1177/1933719112453507.pdf
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