Parvimonas micra can translocate from the subgingival sulcus of the human oral cavity to colorectal adenocarcinoma
Oral and intestinal samples from a cohort of 93 colorectal cancer (CRC) patients and 30 healthy controls (non‐CRC) were collected for microbiome analysis. Saliva (28 non‐CRC and 94 CRC), feces (30 non‐CRC and 97 CRC), subgingival fluid (20 CRC), and tumor tissue samples (20 CRC) were used for 16S me...
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| Published in | Molecular oncology Vol. 18; no. 5; pp. 1143 - 1173 |
|---|---|
| Main Authors | , , , , , , , , , , , , , , , , , , , , , |
| Format | Journal Article |
| Language | English |
| Published |
United States
John Wiley & Sons, Inc
01.05.2024
John Wiley and Sons Inc Wiley |
| Subjects | |
| Online Access | Get full text |
| ISSN | 1574-7891 1878-0261 1878-0261 |
| DOI | 10.1002/1878-0261.13506 |
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| Abstract | Oral and intestinal samples from a cohort of 93 colorectal cancer (CRC) patients and 30 healthy controls (non‐CRC) were collected for microbiome analysis. Saliva (28 non‐CRC and 94 CRC), feces (30 non‐CRC and 97 CRC), subgingival fluid (20 CRC), and tumor tissue samples (20 CRC) were used for 16S metabarcoding and/or RNA sequencing (RNAseq) approaches. A differential analysis of the abundance, performed with the ANCOM‐BC package, adjusting the P‐values by the Holm‐Bonferroni method, revealed that Parvimonas was significantly over‐represented in feces from CRC patients (P‐value < 0.001) compared to healthy controls. A total of 11 Parvimonas micra isolates were obtained from the oral cavity and adenocarcinoma of CRC patients. Genome analysis identified a pair of isolates from the same patient that shared 99.2% identity, demonstrating that P. micra can translocate from the subgingival cavity to the gut. The data suggest that P. micra could migrate in a synergistic consortium with other periodontal bacteria. Metatranscriptomics confirmed that oral bacteria were more active in tumor than in non‐neoplastic tissues. We suggest that P. micra could be considered as a CRC biomarker detected in non‐invasive samples such as feces.
Parvimonas micra can translocate from the oral cavity to the intestinal lumen, through the circulatory or gastrointestinal system, where the anaerobic bacteria undergoes some genome and transcriptomic changes needed for the adaptation to its new niche. P. micra can be considered as an excellent CRC biomarker detected in non‐invasive samples. |
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| AbstractList | Oral and intestinal samples from a cohort of 93 colorectal cancer (CRC) patients and 30 healthy controls (non‐CRC) were collected for microbiome analysis. Saliva (28 non‐CRC and 94 CRC), feces (30 non‐CRC and 97 CRC), subgingival fluid (20 CRC), and tumor tissue samples (20 CRC) were used for 16S metabarcoding and/or RNA sequencing (RNAseq) approaches. A differential analysis of the abundance, performed with the ANCOM‐BC package, adjusting the
P
‐values by the Holm‐Bonferroni method, revealed that
Parvimonas
was significantly over‐represented in feces from CRC patients (
P
‐value < 0.001) compared to healthy controls. A total of 11
Parvimonas micra
isolates were obtained from the oral cavity and adenocarcinoma of CRC patients. Genome analysis identified a pair of isolates from the same patient that shared 99.2% identity, demonstrating that
P. micra
can translocate from the subgingival cavity to the gut. The data suggest that
P. micra
could migrate in a synergistic consortium with other periodontal bacteria. Metatranscriptomics confirmed that oral bacteria were more active in tumor than in non‐neoplastic tissues. We suggest that
P. micra
could be considered as a CRC biomarker detected in non‐invasive samples such as feces. Oral and intestinal samples from a cohort of 93 colorectal cancer (CRC) patients and 30 healthy controls (non-CRC) were collected for microbiome analysis. Saliva (28 non-CRC and 94 CRC), feces (30 non-CRC and 97 CRC), subgingival fluid (20 CRC), and tumor tissue samples (20 CRC) were used for 16S metabarcoding and/or RNA sequencing (RNAseq) approaches. A differential analysis of the abundance, performed with the ANCOM-BC package, adjusting the P-values by the Holm-Bonferroni method, revealed that Parvimonas was significantly over-represented in feces from CRC patients (P-value < 0.001) compared to healthy controls. A total of 11 Parvimonas micra isolates were obtained from the oral cavity and adenocarcinoma of CRC patients. Genome analysis identified a pair of isolates from the same patient that shared 99.2% identity, demonstrating that P. micra can translocate from the subgingival cavity to the gut. The data suggest that P. micra could migrate in a synergistic consortium with other periodontal bacteria. Metatranscriptomics confirmed that oral bacteria were more active in tumor than in non-neoplastic tissues. We suggest that P. micra could be considered as a CRC biomarker detected in non-invasive samples such as feces.Oral and intestinal samples from a cohort of 93 colorectal cancer (CRC) patients and 30 healthy controls (non-CRC) were collected for microbiome analysis. Saliva (28 non-CRC and 94 CRC), feces (30 non-CRC and 97 CRC), subgingival fluid (20 CRC), and tumor tissue samples (20 CRC) were used for 16S metabarcoding and/or RNA sequencing (RNAseq) approaches. A differential analysis of the abundance, performed with the ANCOM-BC package, adjusting the P-values by the Holm-Bonferroni method, revealed that Parvimonas was significantly over-represented in feces from CRC patients (P-value < 0.001) compared to healthy controls. A total of 11 Parvimonas micra isolates were obtained from the oral cavity and adenocarcinoma of CRC patients. Genome analysis identified a pair of isolates from the same patient that shared 99.2% identity, demonstrating that P. micra can translocate from the subgingival cavity to the gut. The data suggest that P. micra could migrate in a synergistic consortium with other periodontal bacteria. Metatranscriptomics confirmed that oral bacteria were more active in tumor than in non-neoplastic tissues. We suggest that P. micra could be considered as a CRC biomarker detected in non-invasive samples such as feces. Oral and intestinal samples from a cohort of 93 colorectal cancer (CRC) patients and 30 healthy controls (non‐CRC) were collected for microbiome analysis. Saliva (28 non‐CRC and 94 CRC), feces (30 non‐CRC and 97 CRC), subgingival fluid (20 CRC), and tumor tissue samples (20 CRC) were used for 16S metabarcoding and/or RNA sequencing (RNAseq) approaches. A differential analysis of the abundance, performed with the ANCOM‐BC package, adjusting the P ‐values by the Holm‐Bonferroni method, revealed that Parvimonas was significantly over‐represented in feces from CRC patients ( P ‐value < 0.001) compared to healthy controls. A total of 11 Parvimonas micra isolates were obtained from the oral cavity and adenocarcinoma of CRC patients. Genome analysis identified a pair of isolates from the same patient that shared 99.2% identity, demonstrating that P. micra can translocate from the subgingival cavity to the gut. The data suggest that P. micra could migrate in a synergistic consortium with other periodontal bacteria. Metatranscriptomics confirmed that oral bacteria were more active in tumor than in non‐neoplastic tissues. We suggest that P. micra could be considered as a CRC biomarker detected in non‐invasive samples such as feces. Parvimonas micra can translocate from the oral cavity to the intestinal lumen, through the circulatory or gastrointestinal system, where the anaerobic bacteria undergoes some genome and transcriptomic changes needed for the adaptation to its new niche. P. micra can be considered as an excellent CRC biomarker detected in non‐invasive samples. Oral and intestinal samples from a cohort of 93 colorectal cancer (CRC) patients and 30 healthy controls (non‐CRC) were collected for microbiome analysis. Saliva (28 non‐CRC and 94 CRC), feces (30 non‐CRC and 97 CRC), subgingival fluid (20 CRC), and tumor tissue samples (20 CRC) were used for 16S metabarcoding and/or RNA sequencing (RNAseq) approaches. A differential analysis of the abundance, performed with the ANCOM‐BC package, adjusting the P‐values by the Holm‐Bonferroni method, revealed that Parvimonas was significantly over‐represented in feces from CRC patients (P‐value < 0.001) compared to healthy controls. A total of 11 Parvimonas micra isolates were obtained from the oral cavity and adenocarcinoma of CRC patients. Genome analysis identified a pair of isolates from the same patient that shared 99.2% identity, demonstrating that P. micra can translocate from the subgingival cavity to the gut. The data suggest that P. micra could migrate in a synergistic consortium with other periodontal bacteria. Metatranscriptomics confirmed that oral bacteria were more active in tumor than in non‐neoplastic tissues. We suggest that P. micra could be considered as a CRC biomarker detected in non‐invasive samples such as feces. Oral and intestinal samples from a cohort of 93 colorectal cancer (CRC) patients and 30 healthy controls (non‐CRC) were collected for microbiome analysis. Saliva (28 non‐CRC and 94 CRC), feces (30 non‐CRC and 97 CRC), subgingival fluid (20 CRC), and tumor tissue samples (20 CRC) were used for 16S metabarcoding and/or RNA sequencing (RNAseq) approaches. A differential analysis of the abundance, performed with the ANCOM‐BC package, adjusting the P‐values by the Holm‐Bonferroni method, revealed that Parvimonas was significantly over‐represented in feces from CRC patients (P‐value < 0.001) compared to healthy controls. A total of 11 Parvimonas micra isolates were obtained from the oral cavity and adenocarcinoma of CRC patients. Genome analysis identified a pair of isolates from the same patient that shared 99.2% identity, demonstrating that P. micra can translocate from the subgingival cavity to the gut. The data suggest that P. micra could migrate in a synergistic consortium with other periodontal bacteria. Metatranscriptomics confirmed that oral bacteria were more active in tumor than in non‐neoplastic tissues. We suggest that P. micra could be considered as a CRC biomarker detected in non‐invasive samples such as feces. Parvimonas micra can translocate from the oral cavity to the intestinal lumen, through the circulatory or gastrointestinal system, where the anaerobic bacteria undergoes some genome and transcriptomic changes needed for the adaptation to its new niche. P. micra can be considered as an excellent CRC biomarker detected in non‐invasive samples. |
| Audience | Academic |
| Author | Trigo‐Tasende, Noelia Vallejo, Juan A. Estévez, Lara S. Pardiñas‐López, Simón Martínez‐Lago, Nieves Ladra, Susana Martin‐De Arribas, Elsa Otero‐Alén, Begoña Aja‐Macaya, Pablo Conde‐Pérez, Kelly Noguera, Jose F. Concha, Ángel Carda‐Diéguez, Miguel Buetas, Elena Aparicio, Luis A. Poza, Margarita Nasser‐Ali, Mohammed Iglesias‐Corrás, Iago Rumbo‐Feal, Soraya Gómez‐Randulfe, Igor Bou, Germán Mira, Alex |
| AuthorAffiliation | 4 Pathological Anatomy Service and Biobank University Hospital of A Coruña (HUAC), Institute of Biomedical Research (INIBIC), Hospital Universitario Spain 7 Medical Oncology Department University Hospital of A Coruña (HUAC), Maternal and Child Hospital Spain 3 Database Laboratory Research Center for Information and Communication Technologies (CITIC), University of A Coruña (UDC), Campus de Elviña Spain 5 General and Digestive Surgery Service University Hospital of A Coruña (HUAC), Hospital Universitario Spain 1 meiGAbiome, Microbiology Research Group, Servicio de Microbiología Center for Advanced Scientific Research (CICA), Institute of Biomedical Research (INIBIC), University Hospital of A Coruña (HUAC), University of A Coruña (UDC), CIBER of Infectious Diseases (CIBERINFEC‐ISCIII), Hospital Universitario Spain 6 Periodontology and Oral Surgery Pardiñas Medical Dental Clinic, Cell Therapy and Regenerative Medicine Group, Institute of Biomedical Research (INIBIC) A Coruña Spain 8 Microbiome |
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| Author_xml | – sequence: 1 givenname: Kelly orcidid: 0000-0003-1238-2221 surname: Conde‐Pérez fullname: Conde‐Pérez, Kelly organization: Center for Advanced Scientific Research (CICA), Institute of Biomedical Research (INIBIC), University Hospital of A Coruña (HUAC), University of A Coruña (UDC), CIBER of Infectious Diseases (CIBERINFEC‐ISCIII), Hospital Universitario – sequence: 2 givenname: Elena orcidid: 0000-0003-3610-2140 surname: Buetas fullname: Buetas, Elena organization: FISABIO Foundation, Center for Advanced Research in Public Health – sequence: 3 givenname: Pablo surname: Aja‐Macaya fullname: Aja‐Macaya, Pablo organization: Center for Advanced Scientific Research (CICA), Institute of Biomedical Research (INIBIC), University Hospital of A Coruña (HUAC), University of A Coruña (UDC), CIBER of Infectious Diseases (CIBERINFEC‐ISCIII), Hospital Universitario – sequence: 4 givenname: Elsa surname: Martin‐De Arribas fullname: Martin‐De Arribas, Elsa organization: Research Center for Information and Communication Technologies (CITIC), University of A Coruña (UDC), Campus de Elviña – sequence: 5 givenname: Iago surname: Iglesias‐Corrás fullname: Iglesias‐Corrás, Iago organization: Research Center for Information and Communication Technologies (CITIC), University of A Coruña (UDC), Campus de Elviña – sequence: 6 givenname: Noelia surname: Trigo‐Tasende fullname: Trigo‐Tasende, Noelia organization: Center for Advanced Scientific Research (CICA), Institute of Biomedical Research (INIBIC), University Hospital of A Coruña (HUAC), University of A Coruña (UDC), CIBER of Infectious Diseases (CIBERINFEC‐ISCIII), Hospital Universitario – sequence: 7 givenname: Mohammed surname: Nasser‐Ali fullname: Nasser‐Ali, Mohammed organization: Center for Advanced Scientific Research (CICA), Institute of Biomedical Research (INIBIC), University Hospital of A Coruña (HUAC), University of A Coruña (UDC), CIBER of Infectious Diseases (CIBERINFEC‐ISCIII), Hospital Universitario – sequence: 8 givenname: Lara S. surname: Estévez fullname: Estévez, Lara S. organization: University Hospital of A Coruña (HUAC), Institute of Biomedical Research (INIBIC), Hospital Universitario – sequence: 9 givenname: Soraya surname: Rumbo‐Feal fullname: Rumbo‐Feal, Soraya organization: Center for Advanced Scientific Research (CICA), Institute of Biomedical Research (INIBIC), University Hospital of A Coruña (HUAC), University of A Coruña (UDC), CIBER of Infectious Diseases (CIBERINFEC‐ISCIII), Hospital Universitario – sequence: 10 givenname: Begoña surname: Otero‐Alén fullname: Otero‐Alén, Begoña organization: University Hospital of A Coruña (HUAC), Institute of Biomedical Research (INIBIC), Hospital Universitario – sequence: 11 givenname: Jose F. surname: Noguera fullname: Noguera, Jose F. organization: University Hospital of A Coruña (HUAC), Hospital Universitario – sequence: 12 givenname: Ángel surname: Concha fullname: Concha, Ángel organization: University Hospital of A Coruña (HUAC), Institute of Biomedical Research (INIBIC), Hospital Universitario – sequence: 13 givenname: Simón surname: Pardiñas‐López fullname: Pardiñas‐López, Simón organization: Pardiñas Medical Dental Clinic, Cell Therapy and Regenerative Medicine Group, Institute of Biomedical Research (INIBIC) – sequence: 14 givenname: Miguel surname: Carda‐Diéguez fullname: Carda‐Diéguez, Miguel organization: FISABIO Foundation, Center for Advanced Research in Public Health – sequence: 15 givenname: Igor surname: Gómez‐Randulfe fullname: Gómez‐Randulfe, Igor organization: University Hospital of A Coruña (HUAC), Maternal and Child Hospital – sequence: 16 givenname: Nieves surname: Martínez‐Lago fullname: Martínez‐Lago, Nieves organization: University Hospital of A Coruña (HUAC), Maternal and Child Hospital – sequence: 17 givenname: Susana surname: Ladra fullname: Ladra, Susana organization: Research Center for Information and Communication Technologies (CITIC), University of A Coruña (UDC), Campus de Elviña – sequence: 18 givenname: Luis A. surname: Aparicio fullname: Aparicio, Luis A. organization: University Hospital of A Coruña (HUAC), Maternal and Child Hospital – sequence: 19 givenname: Germán surname: Bou fullname: Bou, Germán organization: Center for Advanced Scientific Research (CICA), Institute of Biomedical Research (INIBIC), University Hospital of A Coruña (HUAC), University of A Coruña (UDC), CIBER of Infectious Diseases (CIBERINFEC‐ISCIII), Hospital Universitario – sequence: 20 givenname: Alex orcidid: 0000-0002-9127-3877 surname: Mira fullname: Mira, Alex email: mira_ale@gva.es organization: FISABIO Foundation, Center for Advanced Research in Public Health – sequence: 21 givenname: Juan A. orcidid: 0000-0002-7581-8654 surname: Vallejo fullname: Vallejo, Juan A. email: juan.andres.vallejo.vidal@sergas.es organization: Center for Advanced Scientific Research (CICA), Institute of Biomedical Research (INIBIC), University Hospital of A Coruña (HUAC), University of A Coruña (UDC), CIBER of Infectious Diseases (CIBERINFEC‐ISCIII), Hospital Universitario – sequence: 22 givenname: Margarita orcidid: 0000-0001-9423-7268 surname: Poza fullname: Poza, Margarita email: margarita.poza.dominguez@sergas.es organization: University of A Coruña (UDC), Campus da Zapateira |
| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/37558206$$D View this record in MEDLINE/PubMed |
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| CitedBy_id | crossref_primary_10_1007_s00784_025_06267_8 crossref_primary_10_1093_femsre_fuae012 crossref_primary_10_1038_s41579_024_01075_5 crossref_primary_10_1186_s12967_024_05720_8 crossref_primary_10_1038_s41467_025_57530_1 |
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| ContentType | Journal Article |
| Copyright | 2023 The Authors. published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies. 2023 The Authors. Molecular Oncology published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies. COPYRIGHT 2024 John Wiley & Sons, Inc. 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. |
| Copyright_xml | – notice: 2023 The Authors. published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies. – notice: 2023 The Authors. Molecular Oncology published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies. – notice: COPYRIGHT 2024 John Wiley & Sons, Inc. – notice: 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. |
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| DOI | 10.1002/1878-0261.13506 |
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| Keywords | Parvimonas micra metabarcoding colorectal cancer metatranscriptomics microbiome periodontal disease |
| Language | English |
| License | Attribution 2023 The Authors. Molecular Oncology published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
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| Snippet | Oral and intestinal samples from a cohort of 93 colorectal cancer (CRC) patients and 30 healthy controls (non‐CRC) were collected for microbiome analysis.... Oral and intestinal samples from a cohort of 93 colorectal cancer (CRC) patients and 30 healthy controls (non-CRC) were collected for microbiome analysis.... |
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| SubjectTerms | Adenocarcinoma Adenocarcinoma - microbiology Adenocarcinoma - pathology Aged Antibiotics Bacteria Biomarkers Cancer therapies Colorectal cancer Colorectal carcinoma Colorectal Neoplasms - microbiology Colorectal Neoplasms - pathology Comparative analysis CRISPR Development and progression DNA methylation Feces Feces - microbiology Female Firmicutes Genomes Genomics Gingiva Gingiva - microbiology Gingiva - pathology Gum disease Hospitals Humans Immune system Immunology Inflammation Male Medical prognosis metabarcoding Metastasis metatranscriptomics microbiome Microbiomes Microbiota Middle Aged Mouth - microbiology Oral cavity Parvimonas micra Pathogens Peptostreptococcus - genetics Peptostreptococcus - isolation & purification periodontal disease Phreatodrobia micra RNA RNA sequencing RNA, Ribosomal, 16S - genetics Saliva Saliva - microbiology Scientific equipment and supplies industry Tumors |
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| Title | Parvimonas micra can translocate from the subgingival sulcus of the human oral cavity to colorectal adenocarcinoma |
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