Clubroot in Brassica: recent advances in genomics, breeding, and disease management
Clubroot disease, caused by Plasmodiophora brassicae, affects Brassica oilseed and vegetable production worldwide. This review is focused on various aspects of clubroot disease and its management, including understanding the pathogen and resistance in the host plants. Advances in genetics, molecular...
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| Published in | Genome Vol. 64; no. 8; pp. 735 - 760 |
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| Main Authors | , , |
| Format | Journal Article |
| Language | English |
| Published |
1840 Woodward Drive, Suite 1, Ottawa, ON K2C 0P7
NRC Research Press
01.08.2021
Canadian Science Publishing NRC Research Press |
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| Online Access | Get full text |
| ISSN | 0831-2796 1480-3321 1480-3321 |
| DOI | 10.1139/gen-2020-0089 |
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| Abstract | Clubroot disease, caused by Plasmodiophora brassicae, affects Brassica oilseed and vegetable production worldwide. This review is focused on various aspects of clubroot disease and its management, including understanding the pathogen and resistance in the host plants. Advances in genetics, molecular biology techniques, and omics research have helped to identify several major loci, QTL, and genes from the Brassica genomes involved in the control of clubroot resistance. Transcriptomic studies have helped to extend our understanding of the mechanism of infection by the pathogen and the molecular basis of resistance/susceptibility in the host plants. A comprehensive understanding of the clubroot disease and host resistance would allow developing a better strategy by integrating the genetic resistance with cultural practices to manage this disease from a long-term perspective. |
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| AbstractList | Clubroot disease, caused by Plasmodiophora brassicae, affects Brassica oilseed and vegetable production worldwide. This review is focused on various aspects of clubroot disease and its management, including understanding the pathogen and resistance in the host plants. Advances in genetics, molecular biology techniques, and omics research have helped to identify several major loci, QTL, and genes from the Brassica genomes involved in the control of clubroot resistance. Transcriptomic studies have helped to extend our understanding of the mechanism of infection by the pathogen and the molecular basis of resistance/susceptibility in the host plants. A comprehensive understanding of the clubroot disease and host resistance would allow developing a better strategy by integrating the genetic resistance with cultural practices to manage this disease from a long-term perspective. Clubroot disease, caused by Plasmodiophora brassicae, affects Brassica oilseed and vegetable production worldwide. This review is focused on various aspects of clubroot disease and its management, including understanding the pathogen and resistance in the host plants. Advances in genetics, molecular biology techniques, and omics research have helped to identify several major loci, QTL, and genes from the Brassica genomes involved in the control of clubroot resistance. Transcriptomic studies have helped to extend our understanding of the mechanism of infection by the pathogen and the molecular basis of resistance/susceptibility in the host plants. A comprehensive understanding of the clubroot disease and host resistance would allow developing a better strategy by integrating the genetic resistance with cultural practices to manage this disease from a long-term perspective.Clubroot disease, caused by Plasmodiophora brassicae, affects Brassica oilseed and vegetable production worldwide. This review is focused on various aspects of clubroot disease and its management, including understanding the pathogen and resistance in the host plants. Advances in genetics, molecular biology techniques, and omics research have helped to identify several major loci, QTL, and genes from the Brassica genomes involved in the control of clubroot resistance. Transcriptomic studies have helped to extend our understanding of the mechanism of infection by the pathogen and the molecular basis of resistance/susceptibility in the host plants. A comprehensive understanding of the clubroot disease and host resistance would allow developing a better strategy by integrating the genetic resistance with cultural practices to manage this disease from a long-term perspective. Clubroot disease, caused by Plasmodiophora brassicae, affects Brassica oilseed and vegetable production worldwide. This review is focused on various aspects of clubroot disease and its management, including understanding the pathogen and resistance in the host plants. Advances in genetics, molecular biology techniques, and omics research have helped to identify several major loci, QTL, and genes from the Brassica genomes involved in the control of clubroot resistance. Transcriptomic studies have helped to extend our understanding of the mechanism of infection by the pathogen and the molecular basis of resistance/susceptibility in the host plants. A comprehensive understanding of the clubroot disease and host resistance would allow developing a better strategy by integrating the genetic resistance with cultural practices to manage this disease from a long-term perspective.La hernie des crucifères, causée par le Plasmodiophora brassicae, affecte la production de toutes les crucifères, tant oléagineuses qu’horticoles, à l’échelle mondiale. Cette synthèse porte sur divers aspects de la hernie et de son contrôle, incluant la connaissance de l’agent pathogène et de la résistance chez les plantes hôtes. Des avancées en génétique, en biologie moléculaire et en recherches « omiques » ont aidé à identifier plusieurs locus majeurs, tant des QTL que des gènes, issus de génomes appartenant au genre Brassica qui sont impliqués dans la résistance à la hernie des crucifères. Des études transcriptomiques ont aidé à étendre la compréhension des mécanismes d’infection par l’agent pathogène et les assises moléculaires de la résistance/sensibilité chez les plantes hôtes. Une connaissance étendue de la hernie des crucifères et de la résistance chez l’hôte permettra de développer une meilleure stratégie de lutte en intégrant la résistance génétique avec les pratiques culturales pour contrôler cette maladie d’une manière durable. [Traduit par la Rédaction] Clubroot disease, caused by Plasmodiophora brassicae, affects Brassica oilseed and vegetable production worldwide. This review is focused on various aspects of clubroot disease and its management, including understanding the pathogen and resistance in the host plants. Advances in genetics, molecular biology techniques, and omics research have helped to identify several major loci, QTL, and genes from the Brassica genomes involved in the control of clubroot resistance. Transcriptomic studies have helped to extend our understanding of the mechanism of infection by the pathogen and the molecular basis of resistance/susceptibility in the host plants. A comprehensive understanding of the clubroot disease and host resistance would allow developing a better strategy by integrating the genetic resistance with cultural practices to manage this disease from a long-term perspective. Key words: clubroot, Plasmodiophora brassicae, Brassica, disease management, resistance, transcriptomics, next-generation sequencing. La hernie des cruciferes, causee par le Plasmodiophora brassicae, affecte la production de toutes les cruciferes, tant oleagineuses qu'horticoles, a l'echelle mondiale. Cette synthese porte sur divers aspects de la hernie et de son controle, incluant la connaissance de l'agent pathogene et de la resistance chez les plantes hotes. Des avancees en genetique, en biologie moleculaire et en recherches << omiques >> ont aide a identifier plusieurs locus majeurs, tant des QTL que des genes, issus de genomes appartenant au genre Brassica qui sont impliques dans la resistance a la hernie des cruciferes. Des etudes transcriptomiques ont aide a etendre la comprehension des mecanismes d'infection par l'agent pathogene et les assises moleculaires de la resistance/sensibilite chez les plantes hotes. Une connaissance etendue de la hernie des cruciferes et de la resistance chez l'hote permettra de developper une meilleure strategie de lutte en integrant la resistance genetique avec les pratiques culturales pour controler cette maladie d'une maniere durable. [Traduit par la Redaction] Mots-cles: hernie des cruciferes, Plasmodiophora brassicae, Brassica, controle des maladies, resistance, transcriptomique, sequencage de nouvelle generation. |
| Abstract_FL | La hernie des crucifères, causée par le Plasmodiophora brassicae, affecte la production de toutes les crucifères, tant oléagineuses qu’horticoles, à l’échelle mondiale. Cette synthèse porte sur divers aspects de la hernie et de son contrôle, incluant la connaissance de l’agent pathogène et de la résistance chez les plantes hôtes. Des avancées en génétique, en biologie moléculaire et en recherches « omiques » ont aidé à identifier plusieurs locus majeurs, tant des QTL que des gènes, issus de génomes appartenant au genre Brassica qui sont impliqués dans la résistance à la hernie des crucifères. Des études transcriptomiques ont aidé à étendre la compréhension des mécanismes d’infection par l’agent pathogène et les assises moléculaires de la résistance/sensibilité chez les plantes hôtes. Une connaissance étendue de la hernie des crucifères et de la résistance chez l’hôte permettra de développer une meilleure stratégie de lutte en intégrant la résistance génétique avec les pratiques culturales pour contrôler cette maladie d’une manière durable. [Traduit par la Rédaction] |
| Audience | Academic |
| Author | Rahman, Habibur Megha, Swati Hasan, Jakir |
| Author_xml | – sequence: 1 givenname: Jakir surname: Hasan fullname: Hasan, Jakir organization: Department of Agricultural, Food and Nutritional Science, 4-10 Agriculture/Forestry Centre, University of Alberta, Edmonton, AB T6G 2P5, Canada – sequence: 2 givenname: Swati surname: Megha fullname: Megha, Swati organization: Department of Agricultural, Food and Nutritional Science, 4-10 Agriculture/Forestry Centre, University of Alberta, Edmonton, AB T6G 2P5, Canada – sequence: 3 givenname: Habibur surname: Rahman fullname: Rahman, Habibur organization: Department of Agricultural, Food and Nutritional Science, 4-10 Agriculture/Forestry Centre, University of Alberta, Edmonton, AB T6G 2P5, Canada |
| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/33651640$$D View this record in MEDLINE/PubMed |
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| Snippet | Clubroot disease, caused by Plasmodiophora brassicae, affects Brassica oilseed and vegetable production worldwide. This review is focused on various aspects of... |
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| SubjectTerms | Brassica Clubroot contrôle des maladies Crop production Cruciferae disease control Disease management Disease resistance Diseases and pests Genetic aspects genetic resistance Genetics Genomes genomics hernie des crucifères Host plants Molecular biology next-generation sequencing oilseeds Pathogens Plasmodiophora brassicae Quantitative trait loci resistance résistance séquençage de nouvelle génération transcriptomics transcriptomique vegetable growing |
| Title | Clubroot in Brassica: recent advances in genomics, breeding, and disease management |
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