Validity of modulation and optimal settings for advanced voxel-based morphometry

Voxel-based morphometry (VBM) is a widely-used structural neuroimaging technique for comparing meso- and macroscopic regional brain volumes between patients and controls in vivo, but some of its steps, particularly the modulation, lack an experimental validation. The aims of this study were two-fold...

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Published inNeuroImage (Orlando, Fla.) Vol. 86; pp. 81 - 90
Main Authors Radua, Joaquim, Canales-Rodríguez, Erick Jorge, Pomarol-Clotet, Edith, Salvador, Raymond
Format Journal Article
LanguageEnglish
Published Amsterdam Elsevier Inc 01.02.2014
Elsevier
Elsevier Limited
Subjects
Online AccessGet full text
ISSN1053-8119
1095-9572
1095-9572
DOI10.1016/j.neuroimage.2013.07.084

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Abstract Voxel-based morphometry (VBM) is a widely-used structural neuroimaging technique for comparing meso- and macroscopic regional brain volumes between patients and controls in vivo, but some of its steps, particularly the modulation, lack an experimental validation. The aims of this study were two-fold: a) to assess the effects of modulation to detect mesoscopic (i.e. between microscopic and macroscopic) abnormalities on published, classic VBM; and b) to suggest a set of potentially optimal settings for detecting mesoscopic abnormalities with new, advanced, high-resolution diffeomorphic VBM normalization algorithms. Sensitivity and false positive rate after modulating or not in classic VBM using different software packages and spatial statistics, and after setting a range of different parameters in advanced VBM (ANTS-SyN), were calculated in 10 VBM comparisons of 32 altered vs. 32 unaltered gray matter images from different healthy controls. Simulated brain abnormalities comprised mesoscopic volume differences mainly due to cortical thinning. In classic VBM, modulation was associated with a substantial decrease of the sensitivity to detect mesoscopic abnormalities (p<0.001). Optimal settings for advanced VBM included the omission of modulation, the use of large smoothing kernels, and the application of voxel-based or threshold-free cluster enhancement (TFCE) spatial statistics. The modulation-related decrease in sensitivity was due to an increase in variance, and it was more severe in higher-resolution normalization algorithms. Findings from this study suggest the use of unmodulated VBM to detect mesoscopic abnormalities such as cortical thinning. •Modulation in voxel-based morphometry (VBM) has not been experimentally validated.•We assessed the effects of modulation on the efficacy to detect cortical thinning.•Ten VBM comparisons and different software packages and statistics were used.•Modulation was associated to a decrease of the sensitivity to detect abnormalities.•Optimal settings also included large smoothing and voxel-based or TFCE statistics.
AbstractList Voxel-based morphometry (VBM) is a widely-used structural neuroimaging technique for comparing meso- and macroscopic regional brain volumes between patients and controls in vivo, but some of its steps, particularly the modulation, lack an experimental validation. The aims of this study were two-fold: a) to assess the effects of modulation to detect mesoscopic (i.e. between microscopic and macroscopic) abnormalities on published, classic VBM; and b) to suggest a set of potentially optimal settings for detecting mesoscopic abnormalities with new, advanced, high-resolution diffeomorphic VBM normalization algorithms. Sensitivity and false positive rate after modulating or not in classic VBM using different software packages and spatial statistics, and after setting a range of different parameters in advanced VBM (ANTS-SyN), were calculated in 10 VBM comparisons of 32 altered vs. 32 unaltered gray matter images from different healthy controls. Simulated brain abnormalities comprised mesoscopic volume differences mainly due to cortical thinning. In classic VBM, modulation was associated with a substantial decrease of the sensitivity to detect mesoscopic abnormalities (p<0.001). Optimal settings for advanced VBM included the omission of modulation, the use of large smoothing kernels, and the application of voxel-based or threshold-free cluster enhancement (TFCE) spatial statistics. The modulation-related decrease in sensitivity was due to an increase in variance, and it was more severe in higher-resolution normalization algorithms. Findings from this study suggest the use of unmodulated VBM to detect mesoscopic abnormalities such as cortical thinning.
Voxel-based morphometry (VBM) is a widely-used structural neuroimaging technique for comparing meso- and macroscopic regional brain volumes between patients and controls in vivo, but some of its steps, particularly the modulation, lack an experimental validation. The aims of this study were two-fold: a) to assess the effects of modulation to detect mesoscopic (i.e. between microscopic and macroscopic) abnormalities on published, classic VBM; and b) to suggest a set of potentially optimal settings for detecting mesoscopic abnormalities with new, advanced, high-resolution diffeomorphic VBM normalization algorithms. Sensitivity and false positive rate after modulating or not in classic VBM using different software packages and spatial statistics, and after setting a range of different parameters in advanced VBM (ANTS-SyN), were calculated in 10 VBM comparisons of 32 altered vs. 32 unaltered gray matter images from different healthy controls. Simulated brain abnormalities comprised mesoscopic volume differences mainly due to cortical thinning. In classic VBM, modulation was associated with a substantial decrease of the sensitivity to detect mesoscopic abnormalities (p<0.001). Optimal settings for advanced VBM included the omission of modulation, the use of large smoothing kernels, and the application of voxel-based or threshold-free cluster enhancement (TFCE) spatial statistics. The modulation-related decrease in sensitivity was due to an increase in variance, and it was more severe in higher-resolution normalization algorithms. Findings from this study suggest the use of unmodulated VBM to detect mesoscopic abnormalities such as cortical thinning.Voxel-based morphometry (VBM) is a widely-used structural neuroimaging technique for comparing meso- and macroscopic regional brain volumes between patients and controls in vivo, but some of its steps, particularly the modulation, lack an experimental validation. The aims of this study were two-fold: a) to assess the effects of modulation to detect mesoscopic (i.e. between microscopic and macroscopic) abnormalities on published, classic VBM; and b) to suggest a set of potentially optimal settings for detecting mesoscopic abnormalities with new, advanced, high-resolution diffeomorphic VBM normalization algorithms. Sensitivity and false positive rate after modulating or not in classic VBM using different software packages and spatial statistics, and after setting a range of different parameters in advanced VBM (ANTS-SyN), were calculated in 10 VBM comparisons of 32 altered vs. 32 unaltered gray matter images from different healthy controls. Simulated brain abnormalities comprised mesoscopic volume differences mainly due to cortical thinning. In classic VBM, modulation was associated with a substantial decrease of the sensitivity to detect mesoscopic abnormalities (p<0.001). Optimal settings for advanced VBM included the omission of modulation, the use of large smoothing kernels, and the application of voxel-based or threshold-free cluster enhancement (TFCE) spatial statistics. The modulation-related decrease in sensitivity was due to an increase in variance, and it was more severe in higher-resolution normalization algorithms. Findings from this study suggest the use of unmodulated VBM to detect mesoscopic abnormalities such as cortical thinning.
Voxel-based morphometry (VBM) is a widely-used structural neuroimaging technique for comparing meso- and macroscopic regional brain volumes between patients and controls in vivo, but some of its steps, particularly the modulation, lack an experimental validation. The aims of this study were two-fold: a) to assess the effects of modulation to detect mesoscopic (i.e. between microscopic and macroscopic) abnormalities on published, classic VBM; and b) to suggest a set of potentially optimal settings for detecting mesoscopic abnormalities with new, advanced, high-resolution diffeomorphic VBM normalization algorithms. Sensitivity and false positive rate after modulating or not in classic VBM using different software packages and spatial statistics, and after setting a range of different parameters in advanced VBM (ANTS-SyN), were calculated in 10 VBM comparisons of 32 altered vs. 32 unaltered gray matter images from different healthy controls. Simulated brain abnormalities comprised mesoscopic volume differences mainly due to cortical thinning. In classic VBM, modulation was associated with a substantial decrease of the sensitivity to detect mesoscopic abnormalities (p<0.001). Optimal settings for advanced VBM included the omission of modulation, the use of large smoothing kernels, and the application of voxel-based or threshold-free cluster enhancement (TFCE) spatial statistics. The modulation-related decrease in sensitivity was due to an increase in variance, and it was more severe in higher-resolution normalization algorithms. Findings from this study suggest the use of unmodulated VBM to detect mesoscopic abnormalities such as cortical thinning. •Modulation in voxel-based morphometry (VBM) has not been experimentally validated.•We assessed the effects of modulation on the efficacy to detect cortical thinning.•Ten VBM comparisons and different software packages and statistics were used.•Modulation was associated to a decrease of the sensitivity to detect abnormalities.•Optimal settings also included large smoothing and voxel-based or TFCE statistics.
Author Canales-Rodríguez, Erick Jorge
Salvador, Raymond
Radua, Joaquim
Pomarol-Clotet, Edith
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  fullname: Radua, Joaquim
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  givenname: Erick Jorge
  surname: Canales-Rodríguez
  fullname: Canales-Rodríguez, Erick Jorge
  organization: FIDMAG Research Unit, Barcelona, Spain
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  surname: Pomarol-Clotet
  fullname: Pomarol-Clotet, Edith
  organization: FIDMAG Research Unit, Barcelona, Spain
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  givenname: Raymond
  surname: Salvador
  fullname: Salvador, Raymond
  organization: FIDMAG Research Unit, Barcelona, Spain
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Keywords Normalization
Threshold-free cluster enhancement
Cluster-based statistics
Diffeomorphic registration
Modulation
Voxel-based morphometry
Morphometry
Language English
License CC BY 4.0
2013.
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SubjectTerms Adult
Algorithms
Biological and medical sciences
Brain
Brain - cytology
Cluster-based statistics
Diffeomorphic registration
Female
Fundamental and applied biological sciences. Psychology
Humans
Image Enhancement - methods
Image Interpretation, Computer-Assisted - methods
Imaging, Three-Dimensional - methods
Magnetic Resonance Imaging - methods
Male
Medical imaging
Modulation
Neurons - cytology
Normalization
Pattern Recognition, Automated - methods
Reproducibility of Results
Sensitivity and Specificity
Studies
Threshold-free cluster enhancement
Vertebrates: nervous system and sense organs
Voxel-based morphometry
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