Semantic clustering analysis of E3-ubiquitin ligases in gastrointestinal tract defines genes ontology clusters with tissue expression patterns - Iatsiuk, Veronika; Malinka, Frantisek; Pickova, Marketa; Tureckova, Jolana; Klema, Jiri; Spoutil, Frantisek; Novosadova, Vendula; Prochazka, Jan; Sedlacek, Radislav (BMC gastroenterology, 2022)
Keywords: Algorithms; Animals; Cell differentiation; Cellular stress response; Cluster Analysis; Colon; Dextran; Dextran sulfate; Drinking water; Enzymes; Gastroenterology; Gastrointestinal system; Gastrointestinal tract; Gastrointestinal Tract - metabolism; Gene clusters; Gene expression; Gene redundancy; Genetic aspects; GIT; Hepatology; Homeostasis; Humans; Hybridization; Internal Medicine; Intracellular signalling; Laboratories; Ligases; Medicine; Medicine & Public Health; Methods; Mice; Ontology; Phosphatase; Physiological aspects; Post-translational modification; Proteins; Proteomes; Regeneration; RNA polymerase; Semantic biclustering; Semantics; Signal transduction; Small intestine; Stem cells; Ub-ligase; Ubiquitin; Ubiquitin - genetics; Ubiquitin - metabolism; Ubiquitin-proteasome system; Ubiquitin-protein ligase; Ubiquitin-Protein Ligases - genetics; Ubiquitination; Czech Republic; United States--US; Switzerland; Germany; Cluster analysis; Regeneration; GIT; Gene redundancy; Ub-ligase; Semantic biclustering