Predicting dementia development in Parkinson's disease using Bayesian network classifiers
Parkinson's disease (PD) has broadly been associated with mild cognitive impairment (PDMCI) and dementia (PDD). Researchers have studied surrogate, neuroanatomic biomarkers provided by magnetic resonance imaging (MRI) that may help in the early diagnosis of this condition. In this article, four...
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| Published in | Psychiatry research. Neuroimaging Vol. 213; no. 2; pp. 92 - 98 |
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| Main Authors | , , , , , , , , , |
| Format | Journal Article |
| Language | English |
| Published |
Shannon
Elsevier Ireland Ltd
30.08.2013
Elsevier |
| Subjects | |
| Online Access | Get full text |
| ISSN | 0925-4927 1872-7506 |
| DOI | 10.1016/j.pscychresns.2012.06.001 |
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| Abstract | Parkinson's disease (PD) has broadly been associated with mild cognitive impairment (PDMCI) and dementia (PDD). Researchers have studied surrogate, neuroanatomic biomarkers provided by magnetic resonance imaging (MRI) that may help in the early diagnosis of this condition. In this article, four classification models (naïve Bayes, multivariate filter-based naïve Bayes, filter selective naïve Bayes and support vector machines, SVM) have been applied to evaluate their capacity to discriminate between cognitively intact patients with Parkinson's disease (PDCI), PDMCI and PDD. For this purpose, the MRI studies of 45 subjects (16 PDCI, 15 PDMCI and 14 PDD) were acquired and post-processed with Freesurfer, obtaining 112 variables (volumes of subcortical structures and thickness of cortical parcels) per subject. A multivariate filter-based naïve Bayes model was found to be the best classifier, having the highest cross-validated sensitivity, specificity and accuracy. Additionally, the most relevant variables related to dementia in PD, as predicted by our classifiers, were cerebral white matter, and volumes of the lateral ventricles and hippocampi. |
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| AbstractList | Parkinson's disease (PD) has broadly been associated with mild cognitive impairment (PDMCI) and dementia (PDD). Researchers have studied surrogate, neuroanatomic biomarkers provided by magnetic resonance imaging (MRI) that may help in the early diagnosis of this condition. In this article, four classification models (naïve Bayes, multivariate filter-based naïve Bayes, filter selective naïve Bayes and support vector machines, SVM) have been applied to evaluate their capacity to discriminate between cognitively intact patients with Parkinson's disease (PDCI), PDMCI and PDD. For this purpose, the MRI studies of 45 subjects (16 PDCI, 15 PDMCI and 14 PDD) were acquired and post-processed with Freesurfer, obtaining 112 variables (volumes of subcortical structures and thickness of cortical parcels) per subject. A multivariate filter-based naïve Bayes model was found to be the best classifier, having the highest cross-validated sensitivity, specificity and accuracy. Additionally, the most relevant variables related to dementia in PD, as predicted by our classifiers, were cerebral white matter, and volumes of the lateral ventricles and hippocampi. Parkinson's disease (PD) has broadly been associated with mild cognitive impairment (PDMCI) and dementia (PDD). Researchers have studied surrogate, neuroanatomic biomarkers provided by magnetic resonance imaging (MRI) that may help in the early diagnosis of this condition. In this article, four classification models (naïve Bayes, multivariate filter-based naïve Bayes, filter selective naïve Bayes and support vector machines, SVM) have been applied to evaluate their capacity to discriminate between cognitively intact patients with Parkinson's disease (PDCI), PDMCI and PDD. For this purpose, the MRI studies of 45 subjects (16 PDCI, 15 PDMCI and 14 PDD) were acquired and post-processed with Freesurfer, obtaining 112 variables (volumes of subcortical structures and thickness of cortical parcels) per subject. A multivariate filter-based naïve Bayes model was found to be the best classifier, having the highest cross-validated sensitivity, specificity and accuracy. Additionally, the most relevant variables related to dementia in PD, as predicted by our classifiers, were cerebral white matter, and volumes of the lateral ventricles and hippocampi.Parkinson's disease (PD) has broadly been associated with mild cognitive impairment (PDMCI) and dementia (PDD). Researchers have studied surrogate, neuroanatomic biomarkers provided by magnetic resonance imaging (MRI) that may help in the early diagnosis of this condition. In this article, four classification models (naïve Bayes, multivariate filter-based naïve Bayes, filter selective naïve Bayes and support vector machines, SVM) have been applied to evaluate their capacity to discriminate between cognitively intact patients with Parkinson's disease (PDCI), PDMCI and PDD. For this purpose, the MRI studies of 45 subjects (16 PDCI, 15 PDMCI and 14 PDD) were acquired and post-processed with Freesurfer, obtaining 112 variables (volumes of subcortical structures and thickness of cortical parcels) per subject. A multivariate filter-based naïve Bayes model was found to be the best classifier, having the highest cross-validated sensitivity, specificity and accuracy. Additionally, the most relevant variables related to dementia in PD, as predicted by our classifiers, were cerebral white matter, and volumes of the lateral ventricles and hippocampi. Abstract Parkinson's disease (PD) has broadly been associated with mild cognitive impairment (PDMCI) and dementia (PDD). Researchers have studied surrogate, neuroanatomic biomarkers provided by magnetic resonance imaging (MRI) that may help in the early diagnosis of this condition. In this article, four classification models (naïve Bayes, multivariate filter-based naïve Bayes, filter selective naïve Bayes and support vector machines, SVM) have been applied to evaluate their capacity to discriminate between cognitively intact patients with Parkinson's disease (PDCI), PDMCI and PDD. For this purpose, the MRI studies of 45 subjects (16 PDCI, 15 PDMCI and 14 PDD) were acquired and post-processed with Freesurfer, obtaining 112 variables (volumes of subcortical structures and thickness of cortical parcels) per subject. A multivariate filter-based naïve Bayes model was found to be the best classifier, having the highest cross-validated sensitivity, specificity and accuracy. Additionally, the most relevant variables related to dementia in PD, as predicted by our classifiers, were cerebral white matter, and volumes of the lateral ventricles and hippocampi. Parkinson's disease (PD) has broadly been associated with mild cognitive impairment (PDMCI) and dementia (PDD). Researchers have studied surrogate, neuroanatomic biomarkers provided by magnetic resonance imaging (MRI) that may help in the early diagnosis of this condition. In this article, four classification models (naive Bayes, multivariate filter-based naive Bayes, filter selective naive Bayes and support vector machines, SVM) have been applied to evaluate their capacity to discriminate between cognitively intact patients with Parkinson's disease (PDCI), PDMCI and PDD. For this purpose, the MRI studies of 45 subjects (16 PDCI, 15 PDMCI and 14 PDD) were acquired and post-processed with Freesurfer, obtaining 112 variables (volumes of subcortical structures and thickness of cortical parcels) per subject. A multivariate filter-based naive Bayes model was found to be the best classifier, having the highest cross-validated sensitivity, specificity and accuracy. Additionally, the most relevant variables related to dementia in PD, as predicted by our classifiers, were cerebral white matter, and volumes of the lateral ventricles and hippocampi. |
| Author | Gómez-Ansón, Beatriz Vives-Gilabert, Yolanda Pagonabarraga, Javier Kulisevsky, Jaime Bengoetxea, Endika Bielza, Concha Morales, Dinora A. Corcuera-Solano, Idoia Larrañaga, Pedro Delfino, Manuel |
| Author_xml | – sequence: 1 givenname: Dinora A. surname: Morales fullname: Morales, Dinora A. email: dinora.morales@fi.upm.es organization: Computational Intelligence Group, Universidad Politécnica de Madrid, Campus de Montegancedo, 28660 Boadilla del Monte, Madrid 28660, Spain – sequence: 2 givenname: Yolanda surname: Vives-Gilabert fullname: Vives-Gilabert, Yolanda organization: Port d'Informació Científica, Campus UAB, Edificio D, 08193 Bellaterra, Barcelona, Spain – sequence: 3 givenname: Beatriz surname: Gómez-Ansón fullname: Gómez-Ansón, Beatriz email: BGomezA@santpau.cat organization: Neuroradiology Unit, Hospital Santa Creu i Sant Pau, Sant Antoni Maria Claret 167, 08025 Barcelona, Spain – sequence: 4 givenname: Endika surname: Bengoetxea fullname: Bengoetxea, Endika organization: Intelligent Systems Group, University of the Basque Country, Paseo Manuel Lardizabal 1, 20018 San Sebastián, Spain – sequence: 5 givenname: Pedro surname: Larrañaga fullname: Larrañaga, Pedro organization: Computational Intelligence Group, Universidad Politécnica de Madrid, Campus de Montegancedo, 28660 Boadilla del Monte, Madrid 28660, Spain – sequence: 6 givenname: Concha surname: Bielza fullname: Bielza, Concha organization: Computational Intelligence Group, Universidad Politécnica de Madrid, Campus de Montegancedo, 28660 Boadilla del Monte, Madrid 28660, Spain – sequence: 7 givenname: Javier surname: Pagonabarraga fullname: Pagonabarraga, Javier organization: Department of Neurology, Hospital Santa Creu i Sant Pau, Sant Antoni Maria Claret 167, 08025 Barcelona, Spain – sequence: 8 givenname: Jaime surname: Kulisevsky fullname: Kulisevsky, Jaime organization: Department of Neurology, Hospital Santa Creu i Sant Pau, Sant Antoni Maria Claret 167, 08025 Barcelona, Spain – sequence: 9 givenname: Idoia surname: Corcuera-Solano fullname: Corcuera-Solano, Idoia organization: Neuroradiology Unit, Hospital Santa Creu i Sant Pau, Sant Antoni Maria Claret 167, 08025 Barcelona, Spain – sequence: 10 givenname: Manuel surname: Delfino fullname: Delfino, Manuel organization: Port d'Informació Científica, Campus UAB, Edificio D, 08193 Bellaterra, Barcelona, Spain |
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| Copyright | 2012 Elsevier Ireland Ltd Elsevier Ireland Ltd 2015 INIST-CNRS Copyright © 2012 Elsevier Ireland Ltd. All rights reserved. |
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| Keywords | Neuroimaging MCI Feature selection Freesurfer segmentation MRI Machine learning methods Human Nervous system diseases Segmentation Image processing Parkinson disease Nuclear magnetic resonance imaging Cerebral disorder Learning Acquisition process Central nervous system disease Development Bayes network Medical imagery Degenerative disease Extrapyramidal syndrome Dementia |
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| Snippet | Parkinson's disease (PD) has broadly been associated with mild cognitive impairment (PDMCI) and dementia (PDD). Researchers have studied surrogate,... Abstract Parkinson's disease (PD) has broadly been associated with mild cognitive impairment (PDMCI) and dementia (PDD). Researchers have studied surrogate,... |
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| SubjectTerms | Adult and adolescent clinical studies Aged Bayes Theorem Biological and medical sciences Brain - pathology Cognitive Dysfunction - complications Cognitive Dysfunction - diagnosis Cognitive Dysfunction - pathology Degenerative and inherited degenerative diseases of the nervous system. Leukodystrophies. Prion diseases Dementia - complications Dementia - diagnosis Dementia - pathology Feature selection Female Freesurfer segmentation Humans Image Interpretation, Computer-Assisted Machine learning methods Magnetic Resonance Imaging Male MCI Medical sciences MRI Nervous system (semeiology, syndromes) Nervous system as a whole Neuroimaging Neurology Organic mental disorders. Neuropsychology Parkinson Disease - complications Parkinson Disease - pathology Predictive Value of Tests Psychiatry Psychology. Psychoanalysis. Psychiatry Psychopathology. Psychiatry Radiology Sensitivity and Specificity Support Vector Machine |
| Title | Predicting dementia development in Parkinson's disease using Bayesian network classifiers |
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