Fully automated, level set-based segmentation for knee MRIs using an adaptive force function and template: data from the osteoarthritis initiative

• Published in: Biomedical engineering online Vol. 15; no. 1; p. 99
• Main Authors: Ahn, Chunsoo, Bui, Toan Duc, Lee, Yong-woo, Shin, Jitae, Park, Hyunjin
• Format: Journal Article
• Language: English
• Published: London BioMed Central 24.08.2016; BioMed Central Ltd
• Subjects: Adult; Aged; Algorithms; Automation; Biomaterials; Biomedical Engineering and Bioengineering; Biomedical Engineering/Biotechnology; Biotechnology; Cartilage, Articular - diagnostic imaging; Case-Control Studies; Diagnosis; Engineering; Fuzzy Logic; Humans; Image Processing, Computer-Assisted - methods; Image segmentation; Knee Joint - diagnostic imaging; Magnetic Resonance Imaging; Methods; Middle Aged; Osteoarthritis; Osteoarthritis - diagnostic imaging; Signal-To-Noise Ratio; Medical image processing; Knee segmentation; Cartilage; Magnetic resonance imaging
• ISSN: 1475-925X; 1475-925X
• DOI: 10.1186/s12938-016-0225-7

Background This study focuses on osteoarthritis (OA), which affects millions of adults and occurs in knee cartilage. Diagnosis of OA requires accurate segmentation of cartilage structures. Existing approaches to cartilage segmentation of knee imaging suffer from either lack of fully automatic algorithm, sub-par segmentation accuracy, or failure to consider all three cartilage tissues. Methods We propose a novel segmentation algorithm for knee cartilages with level set-based segmentation method and novel template data. We used 20 normal subjects from osteoarthritis initiative database to construct new template data. We adopt spatial fuzzy C-mean clustering for automatic initialization of contours. Force function of our algorithm is modified to improve segmentation performance. Results The proposed algorithm resulted in dice similarity coefficients (DSCs) of 87.1, 84.8 and 81.7 % for the femoral, patellar, and tibial cartilage, respectively from 10 subjects. The DSC results showed improvements of 8.8, 4.3 and 3.5 % for the femoral, patellar, and tibial cartilage respectively compared to existing approaches. Our algorithm could be applied to all three cartilage structures unlike existing approaches that considered only two cartilage tissues. Conclusions Our study proposes a novel fully automated segmentation algorithm adapted for three types of knee cartilage tissues. We leverage state-of-the-art level set approach with newly constructed knee template. The experimental results show that the proposed method improves the performance by an average of 5 % over existing methods.