LISA improves statistical analysis for fMRI
One of the principal goals in functional magnetic resonance imaging (fMRI) is the detection of local activation in the human brain. However, lack of statistical power and inflated false positive rates have recently been identified as major problems in this regard. Here, we propose a non-parametric a...
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Published in | Nature communications Vol. 9; no. 1; pp. 4014 - 9 |
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Main Authors | , , , , , , , |
Format | Journal Article |
Language | English |
Published |
London
Nature Publishing Group UK
01.10.2018
Nature Publishing Group Nature Portfolio |
Subjects | |
Online Access | Get full text |
ISSN | 2041-1723 2041-1723 |
DOI | 10.1038/s41467-018-06304-z |
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Abstract | One of the principal goals in functional magnetic resonance imaging (fMRI) is the detection of local activation in the human brain. However, lack of statistical power and inflated false positive rates have recently been identified as major problems in this regard. Here, we propose a non-parametric and threshold-free framework called LISA to address this demand. It uses a non-linear filter for incorporating spatial context without sacrificing spatial precision. Multiple comparison correction is achieved by controlling the false discovery rate in the filtered maps. Compared to widely used other methods, it shows a boost in statistical power and allows to find small activation areas that have previously evaded detection. The spatial sensitivity of LISA makes it especially suitable for the analysis of high-resolution fMRI data acquired at ultrahigh field (≥7 Tesla).
Functional magnetic resonance imaging (fMRI) is a powerful technique for measuring human brain activity, but the statistical analysis of fMRI data can be difficult. Here, the authors introduce a new fMRI analysis tool, LISA, which provides increased statistical power compared to existing techniques. |
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AbstractList | One of the principal goals in functional magnetic resonance imaging (fMRI) is the detection of local activation in the human brain. However, lack of statistical power and inflated false positive rates have recently been identified as major problems in this regard. Here, we propose a non-parametric and threshold-free framework called LISA to address this demand. It uses a non-linear filter for incorporating spatial context without sacrificing spatial precision. Multiple comparison correction is achieved by controlling the false discovery rate in the filtered maps. Compared to widely used other methods, it shows a boost in statistical power and allows to find small activation areas that have previously evaded detection. The spatial sensitivity of LISA makes it especially suitable for the analysis of high-resolution fMRI data acquired at ultrahigh field (≥7 Tesla). One of the principal goals in functional magnetic resonance imaging (fMRI) is the detection of local activation in the human brain. However, lack of statistical power and inflated false positive rates have recently been identified as major problems in this regard. Here, we propose a non-parametric and threshold-free framework called LISA to address this demand. It uses a non-linear filter for incorporating spatial context without sacrificing spatial precision. Multiple comparison correction is achieved by controlling the false discovery rate in the filtered maps. Compared to widely used other methods, it shows a boost in statistical power and allows to find small activation areas that have previously evaded detection. The spatial sensitivity of LISA makes it especially suitable for the analysis of high-resolution fMRI data acquired at ultrahigh field (≥7 Tesla). Functional magnetic resonance imaging (fMRI) is a powerful technique for measuring human brain activity, but the statistical analysis of fMRI data can be difficult. Here, the authors introduce a new fMRI analysis tool, LISA, which provides increased statistical power compared to existing techniques. Functional magnetic resonance imaging (fMRI) is a powerful technique for measuring human brain activity, but the statistical analysis of fMRI data can be difficult. Here, the authors introduce a new fMRI analysis tool, LISA, which provides increased statistical power compared to existing techniques. One of the principal goals in functional magnetic resonance imaging (fMRI) is the detection of local activation in the human brain. However, lack of statistical power and inflated false positive rates have recently been identified as major problems in this regard. Here, we propose a non-parametric and threshold-free framework called LISA to address this demand. It uses a non-linear filter for incorporating spatial context without sacrificing spatial precision. Multiple comparison correction is achieved by controlling the false discovery rate in the filtered maps. Compared to widely used other methods, it shows a boost in statistical power and allows to find small activation areas that have previously evaded detection. The spatial sensitivity of LISA makes it especially suitable for the analysis of high-resolution fMRI data acquired at ultrahigh field (≥7 Tesla).One of the principal goals in functional magnetic resonance imaging (fMRI) is the detection of local activation in the human brain. However, lack of statistical power and inflated false positive rates have recently been identified as major problems in this regard. Here, we propose a non-parametric and threshold-free framework called LISA to address this demand. It uses a non-linear filter for incorporating spatial context without sacrificing spatial precision. Multiple comparison correction is achieved by controlling the false discovery rate in the filtered maps. Compared to widely used other methods, it shows a boost in statistical power and allows to find small activation areas that have previously evaded detection. The spatial sensitivity of LISA makes it especially suitable for the analysis of high-resolution fMRI data acquired at ultrahigh field (≥7 Tesla). |
ArticleNumber | 4014 |
Author | Lohmann, Gabriele Kuehn, Esther Mueller, Karsten Grodd, Wolfgang Scheffler, Klaus Stelzer, Johannes Kumar, Vinod J. Lacosse, Eric |
Author_xml | – sequence: 1 givenname: Gabriele orcidid: 0000-0002-5922-9016 surname: Lohmann fullname: Lohmann, Gabriele email: gabriele.lohmann@tuebingen.mpg.de organization: Department of Biomedical Magnetic Resonance Imaging, University Hospital Tübingen, Magnetic Resonance Centre, Max-Planck-Institute for Biological Cybernetics – sequence: 2 givenname: Johannes surname: Stelzer fullname: Stelzer, Johannes organization: Department of Biomedical Magnetic Resonance Imaging, University Hospital Tübingen, Magnetic Resonance Centre, Max-Planck-Institute for Biological Cybernetics – sequence: 3 givenname: Eric surname: Lacosse fullname: Lacosse, Eric organization: Magnetic Resonance Centre, Max-Planck-Institute for Biological Cybernetics, Max-Planck-Institute for Intelligent Systems – sequence: 4 givenname: Vinod J. surname: Kumar fullname: Kumar, Vinod J. organization: Magnetic Resonance Centre, Max-Planck-Institute for Biological Cybernetics – sequence: 5 givenname: Karsten surname: Mueller fullname: Mueller, Karsten organization: Methods & Development Group Nuclear Magnetic Resonance, Max-Planck-Institute for Human Cognitive and Brain Sciences – sequence: 6 givenname: Esther surname: Kuehn fullname: Kuehn, Esther organization: German Center for Neurodegenerative Diseases (DZNE), Center for Behavioral Brain Sciences (CBBS), Department of Neurology, Max-Planck-Institute for Human Cognitive and Brain Sciences, Stephanstrasse 1A – sequence: 7 givenname: Wolfgang surname: Grodd fullname: Grodd, Wolfgang organization: Magnetic Resonance Centre, Max-Planck-Institute for Biological Cybernetics – sequence: 8 givenname: Klaus orcidid: 0000-0001-6316-8773 surname: Scheffler fullname: Scheffler, Klaus organization: Department of Biomedical Magnetic Resonance Imaging, University Hospital Tübingen, Magnetic Resonance Centre, Max-Planck-Institute for Biological Cybernetics |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/30275541$$D View this record in MEDLINE/PubMed |
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Snippet | One of the principal goals in functional magnetic resonance imaging (fMRI) is the detection of local activation in the human brain. However, lack of... Functional magnetic resonance imaging (fMRI) is a powerful technique for measuring human brain activity, but the statistical analysis of fMRI data can be... |
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SubjectTerms | 59 59/36 59/57 631/114/1314 631/378/116 631/378/3920 639/705/531 Activation Algorithms Brain Brain - diagnostic imaging Brain - physiology Brain mapping Brain Mapping - methods Computer Simulation Data acquisition Data analysis Functional magnetic resonance imaging Humanities and Social Sciences Humans Hypotheses Linear filters Magnetic resonance imaging Magnetic Resonance Imaging - methods Methods Models, Statistical multidisciplinary Neuroimaging Nonlinear filters Science Science (multidisciplinary) Sensitivity analysis Sensitivity and Specificity Signal-To-Noise Ratio Software Statistical analysis Statistics |
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Title | LISA improves statistical analysis for fMRI |
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