Adaptive Peptide Molecule as the Promising Highly-Efficient Gas-Sensor Material: In Silico Study
Gas sensors are currently employed in various applications in fields such as medicine, ecology, and food processing, and serve as monitoring tools for the protection of human health, safety, and quality of life. Herein, we discuss a promising direction in the research and development of gas sensors...
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Published in | Sensors (Basel, Switzerland) Vol. 23; no. 13; p. 5780 |
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Main Authors | , , , |
Format | Journal Article |
Language | English |
Published |
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21.06.2023
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ISSN | 1424-8220 1424-8220 |
DOI | 10.3390/s23135780 |
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Abstract | Gas sensors are currently employed in various applications in fields such as medicine, ecology, and food processing, and serve as monitoring tools for the protection of human health, safety, and quality of life. Herein, we discuss a promising direction in the research and development of gas sensors based on peptides—biomolecules with high selectivity and sensitivity to various gases. Thanks to the technique developed in this work, which uses a framework based on the density-functional tight-binding theory (DFTB), the most probable adsorption centers were identified and used to describe the interaction of some analyte molecules with peptides. The DFTB method revealed that the physical adsorption of acetone, ammonium, benzene, ethanol, hexane, methanol, toluene, and trinitrotoluene had a binding energy in the range from −0.28 eV to −1.46 eV. It was found that peptides may adapt to the approaching analyte by changing their volume up to a maximum value of approx. 13%, in order to confine electron clouds around the adsorbed molecule. Based on the results obtained, the prospects for using the proposed peptide configurations in gas sensor devices are good. |
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AbstractList | Gas sensors are currently employed in various applications in fields such as medicine, ecology, and food processing, and serve as monitoring tools for the protection of human health, safety, and quality of life. Herein, we discuss a promising direction in the research and development of gas sensors based on peptides—biomolecules with high selectivity and sensitivity to various gases. Thanks to the technique developed in this work, which uses a framework based on the density-functional tight-binding theory (DFTB), the most probable adsorption centers were identified and used to describe the interaction of some analyte molecules with peptides. The DFTB method revealed that the physical adsorption of acetone, ammonium, benzene, ethanol, hexane, methanol, toluene, and trinitrotoluene had a binding energy in the range from −0.28 eV to −1.46 eV. It was found that peptides may adapt to the approaching analyte by changing their volume up to a maximum value of approx. 13%, in order to confine electron clouds around the adsorbed molecule. Based on the results obtained, the prospects for using the proposed peptide configurations in gas sensor devices are good. Gas sensors are currently employed in various applications in fields such as medicine, ecology, and food processing, and serve as monitoring tools for the protection of human health, safety, and quality of life. Herein, we discuss a promising direction in the research and development of gas sensors based on peptides-biomolecules with high selectivity and sensitivity to various gases. Thanks to the technique developed in this work, which uses a framework based on the density-functional tight-binding theory (DFTB), the most probable adsorption centers were identified and used to describe the interaction of some analyte molecules with peptides. The DFTB method revealed that the physical adsorption of acetone, ammonium, benzene, ethanol, hexane, methanol, toluene, and trinitrotoluene had a binding energy in the range from -0.28 eV to -1.46 eV. It was found that peptides may adapt to the approaching analyte by changing their volume up to a maximum value of approx. 13%, in order to confine electron clouds around the adsorbed molecule. Based on the results obtained, the prospects for using the proposed peptide configurations in gas sensor devices are good.Gas sensors are currently employed in various applications in fields such as medicine, ecology, and food processing, and serve as monitoring tools for the protection of human health, safety, and quality of life. Herein, we discuss a promising direction in the research and development of gas sensors based on peptides-biomolecules with high selectivity and sensitivity to various gases. Thanks to the technique developed in this work, which uses a framework based on the density-functional tight-binding theory (DFTB), the most probable adsorption centers were identified and used to describe the interaction of some analyte molecules with peptides. The DFTB method revealed that the physical adsorption of acetone, ammonium, benzene, ethanol, hexane, methanol, toluene, and trinitrotoluene had a binding energy in the range from -0.28 eV to -1.46 eV. It was found that peptides may adapt to the approaching analyte by changing their volume up to a maximum value of approx. 13%, in order to confine electron clouds around the adsorbed molecule. Based on the results obtained, the prospects for using the proposed peptide configurations in gas sensor devices are good. Gas sensors are currently employed in various applications in fields such as medicine, ecology, and food processing, and serve as monitoring tools for the protection of human health, safety, and quality of life. Herein, we discuss a promising direction in the research and development of gas sensors based on peptides-biomolecules with high selectivity and sensitivity to various gases. Thanks to the technique developed in this work, which uses a framework based on the density-functional tight-binding theory (DFTB), the most probable adsorption centers were identified and used to describe the interaction of some analyte molecules with peptides. The DFTB method revealed that the physical adsorption of acetone, ammonium, benzene, ethanol, hexane, methanol, toluene, and trinitrotoluene had a binding energy in the range from -0.28 eV to -1.46 eV. It was found that peptides may adapt to the approaching analyte by changing their volume up to a maximum value of approx. 13%, in order to confine electron clouds around the adsorbed molecule. Based on the results obtained, the prospects for using the proposed peptide configurations in gas sensor devices are good. |
Audience | Academic |
Author | Glukhova, Olga E. Rabchinskii, Maxim K. Petrunin, Alexander A. Sysoev, Victor V. |
AuthorAffiliation | 1 Institute of Physics, Saratov State University, Astrakhanskaya Street 83, 410012 Saratov, Russia; sacha.petrynin@gmail.com 3 Department of Physics, Yuri Gagarin State Technical University of Saratov, Polytechnicheskaya Street 77, 410054 Saratov, Russia 2 Ioffe Institute, Politekhnicheskaya Street 26, 194021 Saint Petersburg, Russia; rabchinskii@mail.ioffe.ru 4 Laboratory of Biomedical Nanotechnology, I.M. Sechenov First Moscow State Medical University, Trubetskaya Street 8-2, 119991 Moscow, Russia |
AuthorAffiliation_xml | – name: 3 Department of Physics, Yuri Gagarin State Technical University of Saratov, Polytechnicheskaya Street 77, 410054 Saratov, Russia – name: 4 Laboratory of Biomedical Nanotechnology, I.M. Sechenov First Moscow State Medical University, Trubetskaya Street 8-2, 119991 Moscow, Russia – name: 1 Institute of Physics, Saratov State University, Astrakhanskaya Street 83, 410012 Saratov, Russia; sacha.petrynin@gmail.com – name: 2 Ioffe Institute, Politekhnicheskaya Street 26, 194021 Saint Petersburg, Russia; rabchinskii@mail.ioffe.ru |
Author_xml | – sequence: 1 givenname: Alexander A. orcidid: 0000-0002-2531-0131 surname: Petrunin fullname: Petrunin, Alexander A. – sequence: 2 givenname: Maxim K. orcidid: 0000-0003-4264-7147 surname: Rabchinskii fullname: Rabchinskii, Maxim K. – sequence: 3 givenname: Victor V. orcidid: 0000-0002-0372-1802 surname: Sysoev fullname: Sysoev, Victor V. – sequence: 4 givenname: Olga E. orcidid: 0000-0002-5670-2058 surname: Glukhova fullname: Glukhova, Olga E. |
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SubjectTerms | Adsorption Amino acids analyte Approximation binding energy Carbon Computer simulation DFTB method electron density Energy Force and energy gas sensors Gases Graphene Internet of Things Machine learning Methods Methyl salicylate Nanomaterials Nanoparticles Pattern recognition systems peptide Peptides Sensors Software VOCs Volatile organic compounds |
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Title | Adaptive Peptide Molecule as the Promising Highly-Efficient Gas-Sensor Material: In Silico Study |
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