Cytochrome P450 2D6 genotype–phenotype characterization through population pharmacokinetic modeling of tedatioxetine
The cytochrome P450 (CYP) 2D6 enzyme exhibits large interindividual differences in metabolic activity. Patients are commonly assigned a CYP2D6 phenotype based on their CYP2D6 genotype, but there is a lack of consensus on how to translate genotypes into phenotypes, causing inconsistency in genotype‐b...
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| Published in | CPT: pharmacometrics and systems pharmacology Vol. 10; no. 9; pp. 983 - 993 |
|---|---|
| Main Authors | , , , , |
| Format | Journal Article |
| Language | English |
| Published |
United States
John Wiley & Sons, Inc
01.09.2021
John Wiley and Sons Inc Wiley |
| Subjects | |
| Online Access | Get full text |
| ISSN | 2163-8306 2163-8306 |
| DOI | 10.1002/psp4.12635 |
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| Abstract | The cytochrome P450 (CYP) 2D6 enzyme exhibits large interindividual differences in metabolic activity. Patients are commonly assigned a CYP2D6 phenotype based on their CYP2D6 genotype, but there is a lack of consensus on how to translate genotypes into phenotypes, causing inconsistency in genotype‐based dose recommendations. The aim of this study was to quantify and compare the impact of different CYP2D6 genotypes and alleles on CYP2D6 metabolism using a large clinical data set. A population pharmacokinetic (popPK) model of tedatioxetine and its CYP2D6‐dependent metabolite was developed based on pharmacokinetic data from 578 subjects. The CYP2D6‐mediated metabolism was quantified for each subject based on estimates from the final popPK model, and CYP2D6 activity scores were calculated for each allele using multiple linear regression. The activity scores estimated for the decreased function alleles were 0.46 (CYP2D6*9), 0.34 (CYP2D6*10), 0.01 (CYP2D6*17), 0.65 (CYP2D6*29), and 0.21 (CYP2D6*41). The CYP2D6*17 and CYP2D6*41 alleles were thus associated with the lowest CYP2D6 activity, although only the difference to the CYP2D6*9 allele was shown to be statistically significant (p = 0.02 and p = 0.05, respectively). The study provides new in vivo evidence of the enzyme function of different CYP2D6 genotypes and alleles. Our findings suggest that the activity score assigned to CYP2D6*41 should be revisited, whereas CYP2D6*17 appears to exhibit substrate‐specific behavior. Further studies are needed to confirm the findings and to improve the understanding of CYP2D6 genotype–phenotype relationships across substrates. |
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| AbstractList | The cytochrome P450 (CYP) 2D6 enzyme exhibits large interindividual differences in metabolic activity. Patients are commonly assigned a CYP2D6 phenotype based on their CYP2D6 genotype, but there is a lack of consensus on how to translate genotypes into phenotypes, causing inconsistency in genotype‐based dose recommendations. The aim of this study was to quantify and compare the impact of different CYP2D6 genotypes and alleles on CYP2D6 metabolism using a large clinical data set. A population pharmacokinetic (popPK) model of tedatioxetine and its CYP2D6‐dependent metabolite was developed based on pharmacokinetic data from 578 subjects. The CYP2D6‐mediated metabolism was quantified for each subject based on estimates from the final popPK model, and CYP2D6 activity scores were calculated for each allele using multiple linear regression. The activity scores estimated for the decreased function alleles were 0.46 (CYP2D6*9), 0.34 (CYP2D6*10), 0.01 (CYP2D6*17), 0.65 (CYP2D6*29), and 0.21 (CYP2D6*41). The CYP2D6*17 and CYP2D6*41 alleles were thus associated with the lowest CYP2D6 activity, although only the difference to the CYP2D6*9 allele was shown to be statistically significant (p = 0.02 and p = 0.05, respectively). The study provides new in vivo evidence of the enzyme function of different CYP2D6 genotypes and alleles. Our findings suggest that the activity score assigned to CYP2D6*41 should be revisited, whereas CYP2D6*17 appears to exhibit substrate‐specific behavior. Further studies are needed to confirm the findings and to improve the understanding of CYP2D6 genotype–phenotype relationships across substrates. Abstract The cytochrome P450 (CYP) 2D6 enzyme exhibits large interindividual differences in metabolic activity. Patients are commonly assigned a CYP2D6 phenotype based on their CYP2D6 genotype, but there is a lack of consensus on how to translate genotypes into phenotypes, causing inconsistency in genotype‐based dose recommendations. The aim of this study was to quantify and compare the impact of different CYP2D6 genotypes and alleles on CYP2D6 metabolism using a large clinical data set. A population pharmacokinetic (popPK) model of tedatioxetine and its CYP2D6‐dependent metabolite was developed based on pharmacokinetic data from 578 subjects. The CYP2D6‐mediated metabolism was quantified for each subject based on estimates from the final popPK model, and CYP2D6 activity scores were calculated for each allele using multiple linear regression. The activity scores estimated for the decreased function alleles were 0.46 (CYP2D6*9), 0.34 (CYP2D6*10), 0.01 (CYP2D6*17), 0.65 (CYP2D6*29), and 0.21 (CYP2D6*41). The CYP2D6*17 and CYP2D6*41 alleles were thus associated with the lowest CYP2D6 activity, although only the difference to the CYP2D6*9 allele was shown to be statistically significant (p = 0.02 and p = 0.05, respectively). The study provides new in vivo evidence of the enzyme function of different CYP2D6 genotypes and alleles. Our findings suggest that the activity score assigned to CYP2D6*41 should be revisited, whereas CYP2D6*17 appears to exhibit substrate‐specific behavior. Further studies are needed to confirm the findings and to improve the understanding of CYP2D6 genotype–phenotype relationships across substrates. The cytochrome P450 (CYP) 2D6 enzyme exhibits large interindividual differences in metabolic activity. Patients are commonly assigned a CYP2D6 phenotype based on their CYP2D6 genotype, but there is a lack of consensus on how to translate genotypes into phenotypes, causing inconsistency in genotype-based dose recommendations. The aim of this study was to quantify and compare the impact of different CYP2D6 genotypes and alleles on CYP2D6 metabolism using a large clinical data set. A population pharmacokinetic (popPK) model of tedatioxetine and its CYP2D6-dependent metabolite was developed based on pharmacokinetic data from 578 subjects. The CYP2D6-mediated metabolism was quantified for each subject based on estimates from the final popPK model, and CYP2D6 activity scores were calculated for each allele using multiple linear regression. The activity scores estimated for the decreased function alleles were 0.46 (CYP2D6*9), 0.34 (CYP2D6*10), 0.01 (CYP2D6*17), 0.65 (CYP2D6*29), and 0.21 (CYP2D6*41). The CYP2D6*17 and CYP2D6*41 alleles were thus associated with the lowest CYP2D6 activity, although only the difference to the CYP2D6*9 allele was shown to be statistically significant (p = 0.02 and p = 0.05, respectively). The study provides new in vivo evidence of the enzyme function of different CYP2D6 genotypes and alleles. Our findings suggest that the activity score assigned to CYP2D6*41 should be revisited, whereas CYP2D6*17 appears to exhibit substrate-specific behavior. Further studies are needed to confirm the findings and to improve the understanding of CYP2D6 genotype–phenotype relationships across substrates. The cytochrome P450 (CYP) 2D6 enzyme exhibits large interindividual differences in metabolic activity. Patients are commonly assigned a CYP2D6 phenotype based on their CYP2D6 genotype, but there is a lack of consensus on how to translate genotypes into phenotypes, causing inconsistency in genotype‐based dose recommendations. The aim of this study was to quantify and compare the impact of different CYP2D6 genotypes and alleles on CYP2D6 metabolism using a large clinical data set. A population pharmacokinetic (popPK) model of tedatioxetine and its CYP2D6‐dependent metabolite was developed based on pharmacokinetic data from 578 subjects. The CYP2D6‐mediated metabolism was quantified for each subject based on estimates from the final popPK model, and CYP2D6 activity scores were calculated for each allele using multiple linear regression. The activity scores estimated for the decreased function alleles were 0.46 ( CYP2D6*9 ), 0.34 ( CYP2D6*10 ), 0.01 ( CYP2D6*17 ), 0.65 ( CYP2D6*29 ), and 0.21 ( CYP2D6*41 ). The CYP2D6*17 and CYP2D6*41 alleles were thus associated with the lowest CYP2D6 activity, although only the difference to the CYP2D6*9 allele was shown to be statistically significant ( p = 0.02 and p = 0.05, respectively). The study provides new in vivo evidence of the enzyme function of different CYP2D6 genotypes and alleles. Our findings suggest that the activity score assigned to CYP2D6*41 should be revisited, whereas CYP2D6*17 appears to exhibit substrate‐specific behavior. Further studies are needed to confirm the findings and to improve the understanding of CYP2D6 genotype–phenotype relationships across substrates. The cytochrome P450 (CYP) 2D6 enzyme exhibits large interindividual differences in metabolic activity. Patients are commonly assigned a CYP2D6 phenotype based on their CYP2D6 genotype, but there is a lack of consensus on how to translate genotypes into phenotypes, causing inconsistency in genotype-based dose recommendations. The aim of this study was to quantify and compare the impact of different CYP2D6 genotypes and alleles on CYP2D6 metabolism using a large clinical data set. A population pharmacokinetic (popPK) model of tedatioxetine and its CYP2D6-dependent metabolite was developed based on pharmacokinetic data from 578 subjects. The CYP2D6-mediated metabolism was quantified for each subject based on estimates from the final popPK model, and CYP2D6 activity scores were calculated for each allele using multiple linear regression. The activity scores estimated for the decreased function alleles were 0.46 (CYP2D6*9), 0.34 (CYP2D6*10), 0.01 (CYP2D6*17), 0.65 (CYP2D6*29), and 0.21 (CYP2D6*41). The CYP2D6*17 and CYP2D6*41 alleles were thus associated with the lowest CYP2D6 activity, although only the difference to the CYP2D6*9 allele was shown to be statistically significant (p = 0.02 and p = 0.05, respectively). The study provides new in vivo evidence of the enzyme function of different CYP2D6 genotypes and alleles. Our findings suggest that the activity score assigned to CYP2D6*41 should be revisited, whereas CYP2D6*17 appears to exhibit substrate-specific behavior. Further studies are needed to confirm the findings and to improve the understanding of CYP2D6 genotype-phenotype relationships across substrates.The cytochrome P450 (CYP) 2D6 enzyme exhibits large interindividual differences in metabolic activity. Patients are commonly assigned a CYP2D6 phenotype based on their CYP2D6 genotype, but there is a lack of consensus on how to translate genotypes into phenotypes, causing inconsistency in genotype-based dose recommendations. The aim of this study was to quantify and compare the impact of different CYP2D6 genotypes and alleles on CYP2D6 metabolism using a large clinical data set. A population pharmacokinetic (popPK) model of tedatioxetine and its CYP2D6-dependent metabolite was developed based on pharmacokinetic data from 578 subjects. The CYP2D6-mediated metabolism was quantified for each subject based on estimates from the final popPK model, and CYP2D6 activity scores were calculated for each allele using multiple linear regression. The activity scores estimated for the decreased function alleles were 0.46 (CYP2D6*9), 0.34 (CYP2D6*10), 0.01 (CYP2D6*17), 0.65 (CYP2D6*29), and 0.21 (CYP2D6*41). The CYP2D6*17 and CYP2D6*41 alleles were thus associated with the lowest CYP2D6 activity, although only the difference to the CYP2D6*9 allele was shown to be statistically significant (p = 0.02 and p = 0.05, respectively). The study provides new in vivo evidence of the enzyme function of different CYP2D6 genotypes and alleles. Our findings suggest that the activity score assigned to CYP2D6*41 should be revisited, whereas CYP2D6*17 appears to exhibit substrate-specific behavior. Further studies are needed to confirm the findings and to improve the understanding of CYP2D6 genotype-phenotype relationships across substrates. |
| Author | Schmidt, Ellen Areberg, Johan Frederiksen, Trine Brøsen, Kim Stage, Tore Bjerregaard |
| AuthorAffiliation | 3 Clinical Pharmacology, Experimental Medicine H. Lundbeck A/S Valby Denmark 1 PKPD Modelling & Simulation, Experimental Medicine H. Lundbeck A/S Valby Denmark 2 Clinical Pharmacology, Pharmacy and Environmental Medicine, Department of Public Health University of Southern Denmark Odense Denmark |
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| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/33932135$$D View this record in MEDLINE/PubMed |
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| CitedBy_id | crossref_primary_10_1146_annurev_pharmtox_032023_121106 crossref_primary_10_1111_cts_13506 crossref_primary_10_1002_cpt_2469 crossref_primary_10_1111_bcpt_13903 crossref_primary_10_1007_s00228_024_03721_6 crossref_primary_10_1002_cpt_2791 |
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| References_xml | – volume: 42 start-page: 713 year: 1996 end-page: 719 article-title: A novel mutant variant of the CYP2D6 gene (CYP2D6*17) common in a black African population: association with diminished debrisoquine hydroxylase activity publication-title: Br J Clin Pharmacol – volume: 140 start-page: 139 year: 2017 end-page: 149 article-title: MicroRNA hsa‐miR‐370‐3p suppresses the expression and induction of CYP2D6 by facilitating mRNA degradation publication-title: Biochem. Pharmacol – volume: 160 start-page: 84 year: 2017 end-page: 105 article-title: Functional proteomic analysis of corticosteroid pharmacodynamics in rat liver: Relationship to hepatic stress, signaling, energy regulation, and drug metabolism publication-title: J Proteomics – volume: 85 start-page: 194 year: 2019 end-page: 201 article-title: Significantly lower CYP2D6 metabolism measured as the O/N‐desmethylvenlafaxine metabolic ratio in carriers of CYP2D6*41 versus CYP2D6*9 or CYP2D6*10: a study on therapeutic drug monitoring data from 1003 genotyped Scandinavian patients publication-title: Br J Clin Pharmacol – volume: 13 start-page: 116 year: 2019 end-page: 124 article-title: Standardizing CYP2D6 genotype to phenotype translation: consensus recommendations from the Clinical Pharmacogenetics Implementation Consortium and Dutch Pharmacogenetics Working Group publication-title: Clin Transl Sci – volume: 48 start-page: 761 year: 2009 end-page: 804 article-title: Polymorphism of human cytochrome P450 2D6 and its clinical significance: Part I publication-title: Clin Pharmacokinet – volume: 87 start-page: 2228 year: 2021 end-page: 2235 article-title: Impact of CYP2D6 on serum concentrations of flupentixol, haloperidol, perphenazine and zuclopenthixol publication-title: Br J Clin. Pharmacol – volume: 103 start-page: 770 year: 2018 end-page: 777 article-title: Clinical Pharmacogenetics Implementation Consortium (CPIC) guideline for CYP2D6 and tamoxifen therapy publication-title: Clin Pharmacol Ther – volume: 6 start-page: 343 year: 2006 end-page: 350 article-title: CYP2D6 genetic variation in healthy adults and psychiatric African‐American subjects: implications for clinical practice and genetic testing publication-title: Pharmacogenomics J – volume: 19 start-page: 621 year: 2005 end-page: 629 article-title: Substrate specific metabolism by polymorphic cytochrome P450 2D6 alleles publication-title: Toxicol Vitr – volume: 107 start-page: 154 year: 2019 end-page: 170 article-title: PharmVar GeneReview: CYP2D6 publication-title: Clin Pharmacol Ther – volume: 109 start-page: 150 year: 2020 end-page: 159 article-title: Quantification of in vivo metabolic activity of CYP2D6 genotypes and alleles through population pharmacokinetic analysis of vortioxetine publication-title: Clin. Pharmacol. Ther – volume: 19 start-page: 69 year: 2017 end-page: 76 article-title: Prediction of CYP2D6 phenotype from genotype across world populations publication-title: Genet Med – volume: 15 start-page: 218 year: 2014 end-page: 232 article-title: Challenges in CYP2D6 phenotype assignment from genotype data: a critical assessment and call for standardization publication-title: Curr Drug Metab – volume: 35 start-page: 1292 year: 2007 end-page: 1300 article-title: Comparative metabolic capabilities and inhibitory profiles of CYP2D6.1, CYP2D6.10, and CYP2D6.17 publication-title: Drug Metab Dispos – volume: 87 start-page: 1243 year: 2020 end-page: 1252 article-title: Impairment of endoxifen formation in tamoxifen‐treated premenopausal breast cancer patients carrying reduced‐function CYP2D6 alleles publication-title: Br J Clin Pharmacol – volume: 16 start-page: 755 year: 2006 end-page: 766 article-title: Impaired expression of CYP2D6 in intermediate metabolizers carrying the *41 allele caused by the intronic SNP 2988G>A: evidence for modulation of splicing events publication-title: Pharmacogenet. Genomics – ident: e_1_2_9_17_1 doi: 10.1016/j.bcp.2017.05.018 – ident: e_1_2_9_6_1 doi: 10.1002/cpt.1007 – ident: e_1_2_9_11_1 doi: 10.2165/11318070-000000000-00000 – ident: e_1_2_9_3_1 doi: 10.1111/cts.12692 – ident: e_1_2_9_4_1 doi: 10.2174/1389200215666140202215316 – ident: e_1_2_9_7_1 doi: 10.1124/dmd.107.015354 – ident: e_1_2_9_12_1 doi: 10.1038/sj.tpj.6500378 – ident: e_1_2_9_10_1 doi: 10.1046/j.1365-2125.1996.00489.x – ident: e_1_2_9_13_1 doi: 10.1097/01.fpc.0000230112.96086.e0 – ident: e_1_2_9_14_1 doi: 10.1111/bcp.14500 – ident: e_1_2_9_15_1 doi: 10.1111/bcp.14626 – ident: e_1_2_9_18_1 doi: 10.1002/cpt.1643 – ident: e_1_2_9_5_1 doi: 10.1111/bcp.13788 – ident: e_1_2_9_16_1 doi: 10.1016/j.jprot.2017.03.007 – ident: e_1_2_9_9_1 doi: 10.1002/cpt.1972 – ident: e_1_2_9_2_1 doi: 10.1038/gim.2016.80 – ident: e_1_2_9_8_1 doi: 10.1016/j.tiv.2005.04.001 |
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| Snippet | The cytochrome P450 (CYP) 2D6 enzyme exhibits large interindividual differences in metabolic activity. Patients are commonly assigned a CYP2D6 phenotype based... Abstract The cytochrome P450 (CYP) 2D6 enzyme exhibits large interindividual differences in metabolic activity. Patients are commonly assigned a CYP2D6... |
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| SubjectTerms | Adolescent Adult Aged Aged, 80 and over Alleles Antidepressive Agents - pharmacokinetics Clinical Trials, Phase I as Topic Clinical Trials, Phase II as Topic Cytochrome Cytochrome P-450 CYP2D6 - genetics Datasets Drug dosages Drug interactions Enzymes Ethnicity Female Genotype Genotype & phenotype Humans Laboratories Male Metabolism Metabolites Middle Aged Models, Biological Oral administration Pharmacokinetics Phenotype Plasma Population Young Adult |
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| Title | Cytochrome P450 2D6 genotype–phenotype characterization through population pharmacokinetic modeling of tedatioxetine |
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