Association between a 15q25 gene variant, smoking quantity and tobacco-related cancers among 17 000 individuals

Background Genetic variants in 15q25 have been identified as potential risk markers for lung cancer (LC), but controversy exists as to whether this is a direct association, or whether the 15q variant is simply a proxy for increased exposure to tobacco carcinogens. Methods We performed a detailed ana...

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Published inInternational journal of epidemiology Vol. 39; no. 2; pp. 563 - 577
Main Authors Lips, Esther H, Gaborieau, Valerie, McKay, James D, Chabrier, Amelie, Hung, Rayjean J, Boffetta, Paolo, Hashibe, Mia, Zaridze, David, Szeszenia-Dabrowska, Neonilia, Lissowska, Jolanta, Rudnai, Peter, Fabianova, Eleonora, Mates, Dana, Bencko, Vladimir, Foretova, Lenka, Janout, Vladimir, Field, John K, Liloglou, Triantafillos, Xinarianos, George, McLaughlin, John, Liu, Geoffrey, Skorpen, Frank, Elvestad, Maiken Bratt, Hveem, Kristian, Vatten, Lars, Study, EPIC, Benhamou, Simone, Lagiou, Pagona, Holcátová, Ivana, Merletti, Franco, Kjaerheim, Kristina, Agudo, Antonio, Castellsagué, Xavier, Macfarlane, Tatiana V, Barzan, Luigi, Canova, Cristina, Lowry, Ray, Conway, David I, Znaor, Ariana, Healy, Claire, Curado, Maria Paula, Koifman, Sergio, Eluf-Neto, Jose, Matos, Elena, Menezes, Ana, Fernandez, Leticia, Metspalu, Andres, Heath, Simon, Lathrop, Mark, Brennan, Paul
Format Journal Article
LanguageEnglish
Published England Oxford University Press 01.04.2010
Subjects
Online AccessGet full text
ISSN0300-5771
1464-3685
1464-3685
DOI10.1093/ije/dyp288

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Abstract Background Genetic variants in 15q25 have been identified as potential risk markers for lung cancer (LC), but controversy exists as to whether this is a direct association, or whether the 15q variant is simply a proxy for increased exposure to tobacco carcinogens. Methods We performed a detailed analysis of one 15q single nucleotide polymorphism (SNP) (rs16969968) with smoking behaviour and cancer risk in a total of 17 300 subjects from five LC studies and four upper aerodigestive tract (UADT) cancer studies. Results Subjects with one minor allele smoked on average 0.3 cigarettes per day (CPD) more, whereas subjects with the homozygous minor AA genotype smoked on average 1.2 CPD more than subjects with a GG genotype (P < 0.001). The variant was associated with heavy smoking (>20 CPD) [odds ratio (OR) = 1.13, 95% confidence interval (CI) 0.96–1.34, P = 0.13 for heterozygotes and 1.81, 95% CI 1.39–2.35 for homozygotes, P < 0.0001]. The strong association between the variant and LC risk (OR = 1.30, 95% CI 1.23–1.38, P = 1 × 10–18), was virtually unchanged after adjusting for this smoking association (smoking adjusted OR = 1.27, 95% CI 1.19–1.35, P = 5 × 10–13). Furthermore, we found an association between the variant allele and an earlier age of LC onset (P = 0.02). The association was also noted in UADT cancers (OR = 1.08, 95% CI 1.01–1.15, P = 0.02). Genome wide association (GWA) analysis of over 300 000 SNPs on 11 219 subjects did not identify any additional variants related to smoking behaviour. Conclusions This study confirms the strong association between 15q gene variants and LC and shows an independent association with smoking quantity, as well as an association with UADT cancers.
AbstractList Background Genetic variants in 15q25 have been identified as potential risk markers for lung cancer (LC), but controversy exists as to whether this is a direct association, or whether the 15q variant is simply a proxy for increased exposure to tobacco carcinogens. Methods We performed a detailed analysis of one 15q single nucleotide polymorphism (SNP) (rs16969968) with smoking behaviour and cancer risk in a total of 17 300 subjects from five LC studies and four upper aerodigestive tract (UADT) cancer studies. Results Subjects with one minor allele smoked on average 0.3 cigarettes per day (CPD) more, whereas subjects with the homozygous minor AA genotype smoked on average 1.2 CPD more than subjects with a GG genotype (P < 0.001). The variant was associated with heavy smoking (>20 CPD) [odds ratio (OR) = 1.13, 95% confidence interval (CI) 0.96–1.34, P = 0.13 for heterozygotes and 1.81, 95% CI 1.39–2.35 for homozygotes, P < 0.0001]. The strong association between the variant and LC risk (OR = 1.30, 95% CI 1.23–1.38, P = 1 × 10–18), was virtually unchanged after adjusting for this smoking association (smoking adjusted OR = 1.27, 95% CI 1.19–1.35, P = 5 × 10–13). Furthermore, we found an association between the variant allele and an earlier age of LC onset (P = 0.02). The association was also noted in UADT cancers (OR = 1.08, 95% CI 1.01–1.15, P = 0.02). Genome wide association (GWA) analysis of over 300 000 SNPs on 11 219 subjects did not identify any additional variants related to smoking behaviour. Conclusions This study confirms the strong association between 15q gene variants and LC and shows an independent association with smoking quantity, as well as an association with UADT cancers.
Genetic variants in 15q25 have been identified as potential risk markers for lung cancer (LC), but controversy exists as to whether this is a direct association, or whether the 15q variant is simply a proxy for increased exposure to tobacco carcinogens. We performed a detailed analysis of one 15q single nucleotide polymorphism (SNP) (rs16969968) with smoking behaviour and cancer risk in a total of 17 300 subjects from five LC studies and four upper aerodigestive tract (UADT) cancer studies. Subjects with one minor allele smoked on average 0.3 cigarettes per day (CPD) more, whereas subjects with the homozygous minor AA genotype smoked on average 1.2 CPD more than subjects with a GG genotype (P < 0.001). The variant was associated with heavy smoking (>20 CPD) [odds ratio (OR) = 1.13, 95% confidence interval (CI) 0.96-1.34, P = 0.13 for heterozygotes and 1.81, 95% CI 1.39-2.35 for homozygotes, P < 0.0001]. The strong association between the variant and LC risk (OR = 1.30, 95% CI 1.23-1.38, P = 1 x 10(-18)), was virtually unchanged after adjusting for this smoking association (smoking adjusted OR = 1.27, 95% CI 1.19-1.35, P = 5 x 10(-13)). Furthermore, we found an association between the variant allele and an earlier age of LC onset (P = 0.02). The association was also noted in UADT cancers (OR = 1.08, 95% CI 1.01-1.15, P = 0.02). Genome wide association (GWA) analysis of over 300 000 SNPs on 11 219 subjects did not identify any additional variants related to smoking behaviour. This study confirms the strong association between 15q gene variants and LC and shows an independent association with smoking quantity, as well as an association with UADT cancers.
Background Genetic variants in 15q25 have been identified as potential risk markers for lung cancer (LC), but controversy exists as to whether this is a direct association, or whether the 15q variant is simply a proxy for increased exposure to tobacco carcinogens.Methods We performed a detailed analysis of one 15q single nucleotide polymorphism (SNP) (rs16969968) with smoking behaviour and cancer risk in a total of 17 300 subjects from five LC studies and four upper aerodigestive tract (UADT) cancer studies.Results Subjects with one minor allele smoked on average 0.3 cigarettes per day (CPD) more, whereas subjects with the homozygous minor AA genotype smoked on average 1.2 CPD more than subjects with a GG genotype (P < 0.001). The variant was associated with heavy smoking (>20 CPD) [odds ratio (OR) = 1.13, 95% confidence interval (CI) 0.96-1.34, P = 0.13 for heterozygotes and 1.81, 95% CI 1.39-2.35 for homozygotes, P < 0.0001]. The strong association between the variant and LC risk (OR = 1.30, 95% CI 1.23-1.38, P = 1 10 super(-18)), was virtually unchanged after adjusting for this smoking association (smoking adjusted OR = 1.27, 95% CI 1.19-1.35, P = 5 10 super(-13)). Furthermore, we found an association between the variant allele and an earlier age of LC onset (P = 0.02). The association was also noted in UADT cancers (OR = 1.08, 95% CI 1.01-1.15, P = 0.02). Genome wide association (GWA) analysis of over 300 000 SNPs on 11 219 subjects did not identify any additional variants related to smoking behaviour.Conclusions This study confirms the strong association between 15q gene variants and LC and shows an independent association with smoking quantity, as well as an association with UADT cancers.
Genetic variants in 15q25 have been identified as potential risk markers for lung cancer (LC), but controversy exists as to whether this is a direct association, or whether the 15q variant is simply a proxy for increased exposure to tobacco carcinogens.BACKGROUNDGenetic variants in 15q25 have been identified as potential risk markers for lung cancer (LC), but controversy exists as to whether this is a direct association, or whether the 15q variant is simply a proxy for increased exposure to tobacco carcinogens.We performed a detailed analysis of one 15q single nucleotide polymorphism (SNP) (rs16969968) with smoking behaviour and cancer risk in a total of 17 300 subjects from five LC studies and four upper aerodigestive tract (UADT) cancer studies.METHODSWe performed a detailed analysis of one 15q single nucleotide polymorphism (SNP) (rs16969968) with smoking behaviour and cancer risk in a total of 17 300 subjects from five LC studies and four upper aerodigestive tract (UADT) cancer studies.Subjects with one minor allele smoked on average 0.3 cigarettes per day (CPD) more, whereas subjects with the homozygous minor AA genotype smoked on average 1.2 CPD more than subjects with a GG genotype (P < 0.001). The variant was associated with heavy smoking (>20 CPD) [odds ratio (OR) = 1.13, 95% confidence interval (CI) 0.96-1.34, P = 0.13 for heterozygotes and 1.81, 95% CI 1.39-2.35 for homozygotes, P < 0.0001]. The strong association between the variant and LC risk (OR = 1.30, 95% CI 1.23-1.38, P = 1 x 10(-18)), was virtually unchanged after adjusting for this smoking association (smoking adjusted OR = 1.27, 95% CI 1.19-1.35, P = 5 x 10(-13)). Furthermore, we found an association between the variant allele and an earlier age of LC onset (P = 0.02). The association was also noted in UADT cancers (OR = 1.08, 95% CI 1.01-1.15, P = 0.02). Genome wide association (GWA) analysis of over 300 000 SNPs on 11 219 subjects did not identify any additional variants related to smoking behaviour.RESULTSSubjects with one minor allele smoked on average 0.3 cigarettes per day (CPD) more, whereas subjects with the homozygous minor AA genotype smoked on average 1.2 CPD more than subjects with a GG genotype (P < 0.001). The variant was associated with heavy smoking (>20 CPD) [odds ratio (OR) = 1.13, 95% confidence interval (CI) 0.96-1.34, P = 0.13 for heterozygotes and 1.81, 95% CI 1.39-2.35 for homozygotes, P < 0.0001]. The strong association between the variant and LC risk (OR = 1.30, 95% CI 1.23-1.38, P = 1 x 10(-18)), was virtually unchanged after adjusting for this smoking association (smoking adjusted OR = 1.27, 95% CI 1.19-1.35, P = 5 x 10(-13)). Furthermore, we found an association between the variant allele and an earlier age of LC onset (P = 0.02). The association was also noted in UADT cancers (OR = 1.08, 95% CI 1.01-1.15, P = 0.02). Genome wide association (GWA) analysis of over 300 000 SNPs on 11 219 subjects did not identify any additional variants related to smoking behaviour.This study confirms the strong association between 15q gene variants and LC and shows an independent association with smoking quantity, as well as an association with UADT cancers.CONCLUSIONSThis study confirms the strong association between 15q gene variants and LC and shows an independent association with smoking quantity, as well as an association with UADT cancers.
Author McLaughlin, John
Hung, Rayjean J
Curado, Maria Paula
Agudo, Antonio
Healy, Claire
Menezes, Ana
Lagiou, Pagona
Janout, Vladimir
Study, EPIC
Hveem, Kristian
Lips, Esther H
Eluf-Neto, Jose
Liloglou, Triantafillos
Gaborieau, Valerie
Vatten, Lars
Benhamou, Simone
Mates, Dana
Fabianova, Eleonora
Canova, Cristina
Liu, Geoffrey
Lathrop, Mark
Chabrier, Amelie
Kjaerheim, Kristina
Conway, David I
Fernandez, Leticia
Matos, Elena
Skorpen, Frank
Xinarianos, George
Barzan, Luigi
Szeszenia-Dabrowska, Neonilia
Hashibe, Mia
Bencko, Vladimir
McKay, James D
Macfarlane, Tatiana V
Lissowska, Jolanta
Field, John K
Elvestad, Maiken Bratt
Rudnai, Peter
Lowry, Ray
Merletti, Franco
Zaridze, David
Foretova, Lenka
Koifman, Sergio
Brennan, Paul
Castellsagué, Xavier
Boffetta, Paolo
Holcátová, Ivana
Heath, Simon
Znaor, Ariana
Metspalu, Andres
AuthorAffiliation 4 Department of Epidemiology, Institute of Occupational Medicine, Lodz, Poland
19 University of Athens School of Medicine, Athens, Greece
14 Princess Margaret Hospital, Ontario Cancer Institute, Toronto, Canada
3 Institute of Carcinogenesis, Cancer Research Centre, Moscow, Russia
8 Institute of Public Health, Bucharest, Romania
34 Institute of Oncology Angel H. Roffo, University of Buenos Aires, Buenos Aires, Argentina
21 Cancer Registry of Norway, Oslo, Norway
30 Trinity College School of Dental Science, Dublin, Ireland
25 General Hospital, Pordenone, Italy
39 Fondation Jean Dausset-CEPH, Paris, France
15 Norwegian University of Science and Technology, Trondheim, Norway
23 CIBERESP, Barcelona, Spain
24 University of Aberdeen School of Medicine, Aberdeen, UK
11 Palacky University, Olomouc, Czech Republic
12 Roy Castle Lung Cancer Research Programme, University of Liverpool Cancer Research Centre, Liverpool, UK
35 Universidade Federal de Pelotas, Pelotas, Brazil
13 Cancer Care Ontario, Toronto, Canada
2
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– name: 6 Johan National Institute of Public Health, Budapest, Hungary
– name: 27 University of Newcastle Dental School, Newcastle, UK
– name: 32 Escola Nacional de Saude Publica, Rio de Janeiro, Brazil
– name: 35 Universidade Federal de Pelotas, Pelotas, Brazil
– name: 1 International Agency for Research on Cancer (IARC), Lyon, France
– name: 33 Universidade de Sao Paulo, Sao Paulo, Brazil
– name: 37 Estonian Genome Project, Institute of Molecular and Cell Biology, University of Tartu/Estonian Biocentre, Tartu, Estonia
– name: 38 Centre National de Genotypage, Institut Genomique, Comissariat à l'énergie Atomique, Evry, France
– name: 11 Palacky University, Olomouc, Czech Republic
– name: 28 University of Glasgow Medical Faculty Dental School, Glasgow, UK
– name: 31 Hospital Araujo Jorge, Goiania, and Populational Cancer Register of Goiania, Goiania, Brazil
– name: 30 Trinity College School of Dental Science, Dublin, Ireland
– name: 10 Department of Cancer Epidemiology and Genetics, Masaryk Memorial Cancer Institute, Brno, Czech Republic
– name: 26 Department of Environmental Medicine and Public Health, University of Padua, Padua, Italy
– name: 3 Institute of Carcinogenesis, Cancer Research Centre, Moscow, Russia
– name: 15 Norwegian University of Science and Technology, Trondheim, Norway
– name: 21 Cancer Registry of Norway, Oslo, Norway
– name: 2 Samuel Lunenfeld Research Institute of the Mount Sinai Hospital, Toronto, Canada
– name: 36 Institute of Oncology and Radiobiology, Havana, Cuba
– name: 5 Department of Cancer Epidemiology and Prevention, Maria Sklodowska-Curie Cancer Center and Institute of Oncology, Warsaw, Poland
– name: 25 General Hospital, Pordenone, Italy
– name: 29 Croatian National Cancer Registry, Croatian National Institute of Public Health, Zagreb, Croatia
– name: 9 Institute of Hygiene and Epidemiology, First Faculty of Medicine and General University Hospital, Charles University in Prague, Czech Republic
– name: 4 Department of Epidemiology, Institute of Occupational Medicine, Lodz, Poland
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– name: 23 CIBERESP, Barcelona, Spain
– name: 16 A full list of authors appears in the Appendix list
– name: 20 Cancer Epidemiology Unit and CeRMS, University of Turin, Turin, Italy
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– name: 13 Cancer Care Ontario, Toronto, Canada
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– name: 18 Institut Gustave Roussy, Villejuif, France
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– name: 12 Roy Castle Lung Cancer Research Programme, University of Liverpool Cancer Research Centre, Liverpool, UK
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  surname: Brennan
  fullname: Brennan, Paul
  email: brennan@iarc.fr, * Corresponding author. International Agency for Research on Cancer, 150 cours Albert Thomas, 69008 Lyon, France. brennan@iarc.fr
  organization: International Agency for Research on Cancer (IARC), Lyon, France
BackLink https://www.ncbi.nlm.nih.gov/pubmed/19776245$$D View this record in MEDLINE/PubMed
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  publication-title: Br J Addict
  doi: 10.1111/j.1360-0443.1991.tb01879.x
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Snippet Background Genetic variants in 15q25 have been identified as potential risk markers for lung cancer (LC), but controversy exists as to whether this is a direct...
Genetic variants in 15q25 have been identified as potential risk markers for lung cancer (LC), but controversy exists as to whether this is a direct...
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StartPage 563
SubjectTerms Age
Aged
Cancer
chromosome 15
Chromosomes, Human, Pair 15 - genetics
Cigarettes
Female
Genetic Epidemiology
Genome-Wide Association Study
Genomes
Genotype
Genotypes
Heterozygotes
Homozygotes
Humans
Lung cancer
Lung Neoplasms - genetics
Male
Middle Aged
nicotine dependence
Odds Ratio
Polymorphism, Single Nucleotide
Receptors, Nicotinic - genetics
Single-nucleotide polymorphism
Smoking
Smoking - adverse effects
smoking quantity
Tobacco
Tobacco Use Disorder - genetics
UADT cancer
Title Association between a 15q25 gene variant, smoking quantity and tobacco-related cancers among 17 000 individuals
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https://www.ncbi.nlm.nih.gov/pubmed/19776245
https://www.proquest.com/docview/733835690
https://www.proquest.com/docview/744620492
https://pubmed.ncbi.nlm.nih.gov/PMC2913450
Volume 39
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