Exploring Publicly Accessible Optical Coherence Tomography Datasets: A Comprehensive Overview

• Published in: Diagnostics (Basel) Vol. 14; no. 15; p. 1668
• Main Authors: Rozhyna, Anastasiia, Somfai, Gábor Márk, Atzori, Manfredo, DeBuc, Delia Cabrera, Saad, Amr, Zoellin, Jay, Müller, Henning
• Format: Journal Article
• Language: English
• Published: Switzerland MDPI AG 01.08.2024
• Subjects: Algorithms; Artificial intelligence; data; data sharing; Datasets; Medical advice systems; Medical imaging; Medical imaging equipment; OCT; open data; Ophthalmology; optical coherence tomography; Privacy, Right of; Search engines; Tomography; OCT; data analysis; data; optical coherence tomography; datasets; open data; data sharing
• ISSN: 2075-4418; 2075-4418
• DOI: 10.3390/diagnostics14151668

Artificial intelligence has transformed medical diagnostic capabilities, particularly through medical image analysis. AI algorithms perform well in detecting abnormalities with a strong performance, enabling computer-aided diagnosis by analyzing the extensive amounts of patient data. The data serve as a foundation upon which algorithms learn and make predictions. Thus, the importance of data cannot be underestimated, and clinically corresponding datasets are required. Many researchers face a lack of medical data due to limited access, privacy concerns, or the absence of available annotations. One of the most widely used diagnostic tools in ophthalmology is Optical Coherence Tomography (OCT). Addressing the data availability issue is crucial for enhancing AI applications in the field of OCT diagnostics. This review aims to provide a comprehensive analysis of all publicly accessible retinal OCT datasets. Our main objective is to compile a list of OCT datasets and their properties, which can serve as an accessible reference, facilitating data curation for medical image analysis tasks. For this review, we searched through the Zenodo repository, Mendeley Data repository, MEDLINE database, and Google Dataset search engine. We systematically evaluated all the identified datasets and found 23 open-access datasets containing OCT images, which significantly vary in terms of size, scope, and ground-truth labels. Our findings indicate the need for improvement in data-sharing practices and standardized documentation. Enhancing the availability and quality of OCT datasets will support the development of AI algorithms and ultimately improve diagnostic capabilities in ophthalmology. By providing a comprehensive list of accessible OCT datasets, this review aims to facilitate better utilization and development of AI in medical image analysis.