Ten years of enhancing neuro‐imaging genetics through meta‐analysis: An overview from the ENIGMA Genetics Working Group
Here we review the motivation for creating the enhancing neuroimaging genetics through meta‐analysis (ENIGMA) Consortium and the genetic analyses undertaken by the consortium so far. We discuss the methodological challenges, findings, and future directions of the genetics working group. A major goal...
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Published in | Human brain mapping Vol. 43; no. 1; pp. 292 - 299 |
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Main Authors | , , , , , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
Hoboken, USA
John Wiley & Sons, Inc
01.01.2022
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Subjects | |
Online Access | Get full text |
ISSN | 1065-9471 1097-0193 1097-0193 |
DOI | 10.1002/hbm.25311 |
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Abstract | Here we review the motivation for creating the enhancing neuroimaging genetics through meta‐analysis (ENIGMA) Consortium and the genetic analyses undertaken by the consortium so far. We discuss the methodological challenges, findings, and future directions of the genetics working group. A major goal of the working group is tackling the reproducibility crisis affecting “candidate gene” and genome‐wide association analyses in neuroimaging. To address this, we developed harmonized analytic methods, and support their use in coordinated analyses across sites worldwide, which also makes it possible to understand heterogeneity in results across sites. These efforts have resulted in the identification of hundreds of common genomic loci robustly associated with brain structure. We have found both pleiotropic and specific genetic effects associated with brain structures, as well as genetic correlations with psychiatric and neurological diseases.
Improvement in the polygenic score prediction of hippocampal volume, as power in the discovery GWAS increases. PRS may be thought of as weighted‐sum scores that summarize the results of the GWAS to a given level of significance, these results show the increased explanatory power of the GWAS for hipocampal volume as sample size increases. |
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AbstractList | Here we review the motivation for creating the enhancing neuroimaging genetics through meta-analysis (ENIGMA) Consortium and the genetic analyses undertaken by the consortium so far. We discuss the methodological challenges, findings, and future directions of the genetics working group. A major goal of the working group is tackling the reproducibility crisis affecting "candidate gene" and genome-wide association analyses in neuroimaging. To address this, we developed harmonized analytic methods, and support their use in coordinated analyses across sites worldwide, which also makes it possible to understand heterogeneity in results across sites. These efforts have resulted in the identification of hundreds of common genomic loci robustly associated with brain structure. We have found both pleiotropic and specific genetic effects associated with brain structures, as well as genetic correlations with psychiatric and neurological diseases. Here we review the motivation for creating the enhancing neuroimaging genetics through meta-analysis (ENIGMA) Consortium and the genetic analyses undertaken by the consortium so far. We discuss the methodological challenges, findings, and future directions of the genetics working group. A major goal of the working group is tackling the reproducibility crisis affecting "candidate gene" and genome-wide association analyses in neuroimaging. To address this, we developed harmonized analytic methods, and support their use in coordinated analyses across sites worldwide, which also makes it possible to understand heterogeneity in results across sites. These efforts have resulted in the identification of hundreds of common genomic loci robustly associated with brain structure. We have found both pleiotropic and specific genetic effects associated with brain structures, as well as genetic correlations with psychiatric and neurological diseases.Here we review the motivation for creating the enhancing neuroimaging genetics through meta-analysis (ENIGMA) Consortium and the genetic analyses undertaken by the consortium so far. We discuss the methodological challenges, findings, and future directions of the genetics working group. A major goal of the working group is tackling the reproducibility crisis affecting "candidate gene" and genome-wide association analyses in neuroimaging. To address this, we developed harmonized analytic methods, and support their use in coordinated analyses across sites worldwide, which also makes it possible to understand heterogeneity in results across sites. These efforts have resulted in the identification of hundreds of common genomic loci robustly associated with brain structure. We have found both pleiotropic and specific genetic effects associated with brain structures, as well as genetic correlations with psychiatric and neurological diseases. Here we review the motivation for creating the enhancing neuroimaging genetics through meta‐analysis (ENIGMA) Consortium and the genetic analyses undertaken by the consortium so far. We discuss the methodological challenges, findings, and future directions of the genetics working group. A major goal of the working group is tackling the reproducibility crisis affecting “candidate gene” and genome‐wide association analyses in neuroimaging. To address this, we developed harmonized analytic methods, and support their use in coordinated analyses across sites worldwide, which also makes it possible to understand heterogeneity in results across sites. These efforts have resulted in the identification of hundreds of common genomic loci robustly associated with brain structure. We have found both pleiotropic and specific genetic effects associated with brain structures, as well as genetic correlations with psychiatric and neurological diseases. Improvement in the polygenic score prediction of hippocampal volume, as power in the discovery GWAS increases. PRS may be thought of as weighted‐sum scores that summarize the results of the GWAS to a given level of significance, these results show the increased explanatory power of the GWAS for hipocampal volume as sample size increases. |
Author | Painter, Jodie N. Pizzagalli, Fabrizio Stein, Jason L. Hibar, Derrek P. Grasby, Katrina L. Bralten, Janita Jahanshad, Neda Colodro‐Conde, Lucía Franke, Barbara Thomopoulos, Sophia I. Lind, Penelope A. Martin, Nicholas G. Medland, Sarah E. Thompson, Paul M. |
AuthorAffiliation | 11 Genetic Epidemiology QIMR Berghofer Medical Research Institute Brisbane Australia 1 Psychiatric Genetics QIMR Berghofer Medical Research Institute Brisbane Australia 8 Donders Institute for Brain, Cognition and Behaviour Radboud University Nijmegen The Netherlands 3 Faculty of Medicine University of Queensland Brisbane Australia 6 Faculty of Psychology University of Murcia Murcia Spain 9 Personalized Healthcare Genentech, Inc. South San Francisco California USA 10 Department of Genetics & UNC Neuroscience Center University of North Carolina at Chapel Hill Chapel Hill North Carolina USA 5 School of Biomedical Sciences Queensland University of Technology Brisbane Australia 2 School of Psychology University of Queensland Brisbane Australia 7 Department of Human Genetics Radboud university medical center Nijmegen The Netherlands 4 Imaging Genetics Center, Mark and Mary Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC University of Southern California Marina del Rey C |
AuthorAffiliation_xml | – name: 9 Personalized Healthcare Genentech, Inc. South San Francisco California USA – name: 2 School of Psychology University of Queensland Brisbane Australia – name: 7 Department of Human Genetics Radboud university medical center Nijmegen The Netherlands – name: 5 School of Biomedical Sciences Queensland University of Technology Brisbane Australia – name: 6 Faculty of Psychology University of Murcia Murcia Spain – name: 4 Imaging Genetics Center, Mark and Mary Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC University of Southern California Marina del Rey California USA – name: 11 Genetic Epidemiology QIMR Berghofer Medical Research Institute Brisbane Australia – name: 8 Donders Institute for Brain, Cognition and Behaviour Radboud University Nijmegen The Netherlands – name: 10 Department of Genetics & UNC Neuroscience Center University of North Carolina at Chapel Hill Chapel Hill North Carolina USA – name: 3 Faculty of Medicine University of Queensland Brisbane Australia – name: 1 Psychiatric Genetics QIMR Berghofer Medical Research Institute Brisbane Australia |
Author_xml | – sequence: 1 givenname: Sarah E. orcidid: 0000-0003-1382-380X surname: Medland fullname: Medland, Sarah E. email: sarah.medland@qimrberghofer.edu.au organization: University of Queensland – sequence: 2 givenname: Katrina L. surname: Grasby fullname: Grasby, Katrina L. organization: QIMR Berghofer Medical Research Institute – sequence: 3 givenname: Neda surname: Jahanshad fullname: Jahanshad, Neda organization: University of Southern California – sequence: 4 givenname: Jodie N. surname: Painter fullname: Painter, Jodie N. organization: QIMR Berghofer Medical Research Institute – sequence: 5 givenname: Lucía surname: Colodro‐Conde fullname: Colodro‐Conde, Lucía organization: University of Murcia – sequence: 6 givenname: Janita surname: Bralten fullname: Bralten, Janita organization: Radboud University – sequence: 7 givenname: Derrek P. surname: Hibar fullname: Hibar, Derrek P. organization: Genentech, Inc – sequence: 8 givenname: Penelope A. surname: Lind fullname: Lind, Penelope A. organization: Queensland University of Technology – sequence: 9 givenname: Fabrizio surname: Pizzagalli fullname: Pizzagalli, Fabrizio organization: University of Southern California – sequence: 10 givenname: Sophia I. orcidid: 0000-0002-0046-4070 surname: Thomopoulos fullname: Thomopoulos, Sophia I. organization: University of Southern California – sequence: 11 givenname: Jason L. orcidid: 0000-0003-4829-0513 surname: Stein fullname: Stein, Jason L. organization: University of North Carolina at Chapel Hill – sequence: 12 givenname: Barbara surname: Franke fullname: Franke, Barbara organization: Radboud University – sequence: 13 givenname: Nicholas G. surname: Martin fullname: Martin, Nicholas G. organization: QIMR Berghofer Medical Research Institute – sequence: 14 givenname: Paul M. surname: Thompson fullname: Thompson, Paul M. organization: University of Southern California |
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Copyright | 2020 The Authors. published by Wiley Periodicals LLC. 2020 The Authors. Human Brain Mapping published by Wiley Periodicals LLC. 2020. This article is published under http://creativecommons.org/licenses/by-nc/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. |
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SubjectTerms | Alzheimer's disease Brain Brain - anatomy & histology Brain - diagnostic imaging Consortia Genetic analysis Genetic effects Genetics Genome-Wide Association Study Genomes GWAS Heterogeneity Humans Magnetic resonance imaging Medical imaging Mental Disorders - diagnostic imaging Mental Disorders - genetics Mental Disorders - pathology Meta-analysis Meta-Analysis as Topic Motivation MRI Multicenter Studies as Topic Nervous System Diseases - diagnostic imaging Nervous System Diseases - genetics Nervous System Diseases - pathology Neuroimaging Neurological diseases neuro‐imaging genetics Quality control Reproducibility Review Reviews Sample size |
Title | Ten years of enhancing neuro‐imaging genetics through meta‐analysis: An overview from the ENIGMA Genetics Working Group |
URI | https://onlinelibrary.wiley.com/doi/abs/10.1002%2Fhbm.25311 https://www.ncbi.nlm.nih.gov/pubmed/33300665 https://www.proquest.com/docview/2610403650 https://www.proquest.com/docview/2469086187 https://pubmed.ncbi.nlm.nih.gov/PMC8675405 |
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