Ten years of enhancing neuro‐imaging genetics through meta‐analysis: An overview from the ENIGMA Genetics Working Group

Here we review the motivation for creating the enhancing neuroimaging genetics through meta‐analysis (ENIGMA) Consortium and the genetic analyses undertaken by the consortium so far. We discuss the methodological challenges, findings, and future directions of the genetics working group. A major goal...

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Published inHuman brain mapping Vol. 43; no. 1; pp. 292 - 299
Main Authors Medland, Sarah E., Grasby, Katrina L., Jahanshad, Neda, Painter, Jodie N., Colodro‐Conde, Lucía, Bralten, Janita, Hibar, Derrek P., Lind, Penelope A., Pizzagalli, Fabrizio, Thomopoulos, Sophia I., Stein, Jason L., Franke, Barbara, Martin, Nicholas G., Thompson, Paul M.
Format Journal Article
LanguageEnglish
Published Hoboken, USA John Wiley & Sons, Inc 01.01.2022
Subjects
Online AccessGet full text
ISSN1065-9471
1097-0193
1097-0193
DOI10.1002/hbm.25311

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Abstract Here we review the motivation for creating the enhancing neuroimaging genetics through meta‐analysis (ENIGMA) Consortium and the genetic analyses undertaken by the consortium so far. We discuss the methodological challenges, findings, and future directions of the genetics working group. A major goal of the working group is tackling the reproducibility crisis affecting “candidate gene” and genome‐wide association analyses in neuroimaging. To address this, we developed harmonized analytic methods, and support their use in coordinated analyses across sites worldwide, which also makes it possible to understand heterogeneity in results across sites. These efforts have resulted in the identification of hundreds of common genomic loci robustly associated with brain structure. We have found both pleiotropic and specific genetic effects associated with brain structures, as well as genetic correlations with psychiatric and neurological diseases. Improvement in the polygenic score prediction of hippocampal volume, as power in the discovery GWAS increases. PRS may be thought of as weighted‐sum scores that summarize the results of the GWAS to a given level of significance, these results show the increased explanatory power of the GWAS for hipocampal volume as sample size increases.
AbstractList Here we review the motivation for creating the enhancing neuroimaging genetics through meta-analysis (ENIGMA) Consortium and the genetic analyses undertaken by the consortium so far. We discuss the methodological challenges, findings, and future directions of the genetics working group. A major goal of the working group is tackling the reproducibility crisis affecting "candidate gene" and genome-wide association analyses in neuroimaging. To address this, we developed harmonized analytic methods, and support their use in coordinated analyses across sites worldwide, which also makes it possible to understand heterogeneity in results across sites. These efforts have resulted in the identification of hundreds of common genomic loci robustly associated with brain structure. We have found both pleiotropic and specific genetic effects associated with brain structures, as well as genetic correlations with psychiatric and neurological diseases.
Here we review the motivation for creating the enhancing neuroimaging genetics through meta-analysis (ENIGMA) Consortium and the genetic analyses undertaken by the consortium so far. We discuss the methodological challenges, findings, and future directions of the genetics working group. A major goal of the working group is tackling the reproducibility crisis affecting "candidate gene" and genome-wide association analyses in neuroimaging. To address this, we developed harmonized analytic methods, and support their use in coordinated analyses across sites worldwide, which also makes it possible to understand heterogeneity in results across sites. These efforts have resulted in the identification of hundreds of common genomic loci robustly associated with brain structure. We have found both pleiotropic and specific genetic effects associated with brain structures, as well as genetic correlations with psychiatric and neurological diseases.Here we review the motivation for creating the enhancing neuroimaging genetics through meta-analysis (ENIGMA) Consortium and the genetic analyses undertaken by the consortium so far. We discuss the methodological challenges, findings, and future directions of the genetics working group. A major goal of the working group is tackling the reproducibility crisis affecting "candidate gene" and genome-wide association analyses in neuroimaging. To address this, we developed harmonized analytic methods, and support their use in coordinated analyses across sites worldwide, which also makes it possible to understand heterogeneity in results across sites. These efforts have resulted in the identification of hundreds of common genomic loci robustly associated with brain structure. We have found both pleiotropic and specific genetic effects associated with brain structures, as well as genetic correlations with psychiatric and neurological diseases.
Here we review the motivation for creating the enhancing neuroimaging genetics through meta‐analysis (ENIGMA) Consortium and the genetic analyses undertaken by the consortium so far. We discuss the methodological challenges, findings, and future directions of the genetics working group. A major goal of the working group is tackling the reproducibility crisis affecting “candidate gene” and genome‐wide association analyses in neuroimaging. To address this, we developed harmonized analytic methods, and support their use in coordinated analyses across sites worldwide, which also makes it possible to understand heterogeneity in results across sites. These efforts have resulted in the identification of hundreds of common genomic loci robustly associated with brain structure. We have found both pleiotropic and specific genetic effects associated with brain structures, as well as genetic correlations with psychiatric and neurological diseases. Improvement in the polygenic score prediction of hippocampal volume, as power in the discovery GWAS increases. PRS may be thought of as weighted‐sum scores that summarize the results of the GWAS to a given level of significance, these results show the increased explanatory power of the GWAS for hipocampal volume as sample size increases.
Author Painter, Jodie N.
Pizzagalli, Fabrizio
Stein, Jason L.
Hibar, Derrek P.
Grasby, Katrina L.
Bralten, Janita
Jahanshad, Neda
Colodro‐Conde, Lucía
Franke, Barbara
Thomopoulos, Sophia I.
Lind, Penelope A.
Martin, Nicholas G.
Medland, Sarah E.
Thompson, Paul M.
AuthorAffiliation 11 Genetic Epidemiology QIMR Berghofer Medical Research Institute Brisbane Australia
1 Psychiatric Genetics QIMR Berghofer Medical Research Institute Brisbane Australia
8 Donders Institute for Brain, Cognition and Behaviour Radboud University Nijmegen The Netherlands
3 Faculty of Medicine University of Queensland Brisbane Australia
6 Faculty of Psychology University of Murcia Murcia Spain
9 Personalized Healthcare Genentech, Inc. South San Francisco California USA
10 Department of Genetics & UNC Neuroscience Center University of North Carolina at Chapel Hill Chapel Hill North Carolina USA
5 School of Biomedical Sciences Queensland University of Technology Brisbane Australia
2 School of Psychology University of Queensland Brisbane Australia
7 Department of Human Genetics Radboud university medical center Nijmegen The Netherlands
4 Imaging Genetics Center, Mark and Mary Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC University of Southern California Marina del Rey C
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Issue 1
Keywords MRI
neuro-imaging genetics
GWAS
Language English
License Attribution-NonCommercial
2020 The Authors. Human Brain Mapping published by Wiley Periodicals LLC.
This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
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Snippet Here we review the motivation for creating the enhancing neuroimaging genetics through meta‐analysis (ENIGMA) Consortium and the genetic analyses undertaken by...
Here we review the motivation for creating the enhancing neuroimaging genetics through meta-analysis (ENIGMA) Consortium and the genetic analyses undertaken by...
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StartPage 292
SubjectTerms Alzheimer's disease
Brain
Brain - anatomy & histology
Brain - diagnostic imaging
Consortia
Genetic analysis
Genetic effects
Genetics
Genome-Wide Association Study
Genomes
GWAS
Heterogeneity
Humans
Magnetic resonance imaging
Medical imaging
Mental Disorders - diagnostic imaging
Mental Disorders - genetics
Mental Disorders - pathology
Meta-analysis
Meta-Analysis as Topic
Motivation
MRI
Multicenter Studies as Topic
Nervous System Diseases - diagnostic imaging
Nervous System Diseases - genetics
Nervous System Diseases - pathology
Neuroimaging
Neurological diseases
neuro‐imaging genetics
Quality control
Reproducibility
Review
Reviews
Sample size
Title Ten years of enhancing neuro‐imaging genetics through meta‐analysis: An overview from the ENIGMA Genetics Working Group
URI https://onlinelibrary.wiley.com/doi/abs/10.1002%2Fhbm.25311
https://www.ncbi.nlm.nih.gov/pubmed/33300665
https://www.proquest.com/docview/2610403650
https://www.proquest.com/docview/2469086187
https://pubmed.ncbi.nlm.nih.gov/PMC8675405
Volume 43
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