PTEN Protein Loss by Immunostaining: Analytic Validation and Prognostic Indicator for a High Risk Surgical Cohort of Prostate Cancer Patients

Purpose: Analytically validated assays to interrogate biomarker status in clinical samples are crucial for personalized medicine. PTEN is a tumor suppressor commonly inactivated in prostate cancer that has been mechanistically linked to disease aggressiveness. Though deletion of PTEN, as detected by...

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Published inClinical cancer research Vol. 17; no. 20; pp. 6563 - 6573
Main Authors Lotan, Tamara L., Gurel, Bora, Sutcliffe, Siobhan, Esopi, David, Liu, Wennuan, Xu, Jianfeng, Hicks, Jessica L., Park, Ben H., Humphreys, Elizabeth, Partin, Alan W., Han, Misop, Netto, George J., Isaacs, William B., De Marzo, Angelo M.
Format Journal Article
LanguageEnglish
Published Philadelphia, PA American Association for Cancer Research 15.10.2011
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Online AccessGet full text
ISSN1078-0432
1557-3265
1557-3265
1078-0432
DOI10.1158/1078-0432.CCR-11-1244

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Abstract Purpose: Analytically validated assays to interrogate biomarker status in clinical samples are crucial for personalized medicine. PTEN is a tumor suppressor commonly inactivated in prostate cancer that has been mechanistically linked to disease aggressiveness. Though deletion of PTEN, as detected by cumbersome FISH spot counting assays, is associated with poor prognosis, few studies have validated immunohistochemistry (IHC) assays to determine whether loss of PTEN protein is associated with unfavorable disease. Experimental Design: PTEN IHC was validated by employing formalin fixed and paraffin-embedded isogenic human cell lines containing or lacking intact PTEN alleles. PTEN IHC was 100% sensitive and 97.8% specific for detecting genomic alterations in 58 additional cell lines. PTEN protein loss was then assessed on 376 prostate tumor samples, and PTEN FISH or high resolution single nucleotide polymorphism microarray analysis was done on a subset of these cases. Results: PTEN protein loss, as assessed as a dichotomous IHC variable, was highly reproducible, correlated strongly with adverse pathologic features (e.g., Gleason score and pathologic stage), detected between 75% and 86% of cases with PTEN genomic loss, and was found at times in the absence of apparent genomic loss. In a cohort of 217 high risk surgically treated patients, PTEN protein loss was associated with decreased time to metastasis. Conclusion: These studies validate a simple method to interrogate PTEN status in clinical specimens and support the utility of this test in future multicenter studies, clinical trials, and ultimately perhaps for routine clinical care. Clin Cancer Res; 17(20); 6563–73. ©2011 AACR.
AbstractList Analytically validated assays to interrogate biomarker status in clinical samples are crucial for personalized medicine. PTEN is a tumor suppressor commonly inactivated in prostate cancer that has been mechanistically linked to disease aggressiveness. Though deletion of PTEN, as detected by cumbersome FISH spot counting assays, is associated with poor prognosis, few studies have validated immunohistochemistry (IHC) assays to determine whether loss of PTEN protein is associated with unfavorable disease. PTEN IHC was validated by employing formalin fixed and paraffin-embedded isogenic human cell lines containing or lacking intact PTEN alleles. PTEN IHC was 100% sensitive and 97.8% specific for detecting genomic alterations in 58 additional cell lines. PTEN protein loss was then assessed on 376 prostate tumor samples, and PTEN FISH or high resolution single nucleotide polymorphism microarray analysis was done on a subset of these cases. PTEN protein loss, as assessed as a dichotomous IHC variable, was highly reproducible, correlated strongly with adverse pathologic features (e.g., Gleason score and pathologic stage), detected between 75% and 86% of cases with PTEN genomic loss, and was found at times in the absence of apparent genomic loss. In a cohort of 217 high risk surgically treated patients, PTEN protein loss was associated with decreased time to metastasis. These studies validate a simple method to interrogate PTEN status in clinical specimens and support the utility of this test in future multicenter studies, clinical trials, and ultimately perhaps for routine clinical care.
Analytically validated assays to interrogate biomarker status in clinical samples are crucial for personalized medicine. PTEN is a tumor suppressor commonly inactivated in prostate cancer that has been mechanistically linked to disease aggressiveness. Though deletion of PTEN, as detected by cumbersome FISH spot counting assays, is associated with poor prognosis, few studies have validated immunohistochemistry (IHC) assays to determine whether loss of PTEN protein is associated with unfavorable disease.PURPOSEAnalytically validated assays to interrogate biomarker status in clinical samples are crucial for personalized medicine. PTEN is a tumor suppressor commonly inactivated in prostate cancer that has been mechanistically linked to disease aggressiveness. Though deletion of PTEN, as detected by cumbersome FISH spot counting assays, is associated with poor prognosis, few studies have validated immunohistochemistry (IHC) assays to determine whether loss of PTEN protein is associated with unfavorable disease.PTEN IHC was validated by employing formalin fixed and paraffin-embedded isogenic human cell lines containing or lacking intact PTEN alleles. PTEN IHC was 100% sensitive and 97.8% specific for detecting genomic alterations in 58 additional cell lines. PTEN protein loss was then assessed on 376 prostate tumor samples, and PTEN FISH or high resolution single nucleotide polymorphism microarray analysis was done on a subset of these cases.EXPERIMENTAL DESIGNPTEN IHC was validated by employing formalin fixed and paraffin-embedded isogenic human cell lines containing or lacking intact PTEN alleles. PTEN IHC was 100% sensitive and 97.8% specific for detecting genomic alterations in 58 additional cell lines. PTEN protein loss was then assessed on 376 prostate tumor samples, and PTEN FISH or high resolution single nucleotide polymorphism microarray analysis was done on a subset of these cases.PTEN protein loss, as assessed as a dichotomous IHC variable, was highly reproducible, correlated strongly with adverse pathologic features (e.g., Gleason score and pathologic stage), detected between 75% and 86% of cases with PTEN genomic loss, and was found at times in the absence of apparent genomic loss. In a cohort of 217 high risk surgically treated patients, PTEN protein loss was associated with decreased time to metastasis.RESULTSPTEN protein loss, as assessed as a dichotomous IHC variable, was highly reproducible, correlated strongly with adverse pathologic features (e.g., Gleason score and pathologic stage), detected between 75% and 86% of cases with PTEN genomic loss, and was found at times in the absence of apparent genomic loss. In a cohort of 217 high risk surgically treated patients, PTEN protein loss was associated with decreased time to metastasis.These studies validate a simple method to interrogate PTEN status in clinical specimens and support the utility of this test in future multicenter studies, clinical trials, and ultimately perhaps for routine clinical care.CONCLUSIONThese studies validate a simple method to interrogate PTEN status in clinical specimens and support the utility of this test in future multicenter studies, clinical trials, and ultimately perhaps for routine clinical care.
Purpose: Analytically validated assays to interrogate biomarker status in clinical samples are crucial for personalized medicine. PTEN is a tumor suppressor commonly inactivated in prostate cancer that has been mechanistically linked to disease aggressiveness. Though deletion of PTEN, as detected by cumbersome FISH spot counting assays, is associated with poor prognosis, few studies have validated immunohistochemistry (IHC) assays to determine whether loss of PTEN protein is associated with unfavorable disease. Experimental Design: PTEN IHC was validated by employing formalin fixed and paraffin-embedded isogenic human cell lines containing or lacking intact PTEN alleles. PTEN IHC was 100% sensitive and 97.8% specific for detecting genomic alterations in 58 additional cell lines. PTEN protein loss was then assessed on 376 prostate tumor samples, and PTEN FISH or high resolution single nucleotide polymorphism microarray analysis was done on a subset of these cases. Results: PTEN protein loss, as assessed as a dichotomous IHC variable, was highly reproducible, correlated strongly with adverse pathologic features (e.g., Gleason score and pathologic stage), detected between 75% and 86% of cases with PTEN genomic loss, and was found at times in the absence of apparent genomic loss. In a cohort of 217 high risk surgically treated patients, PTEN protein loss was associated with decreased time to metastasis. Conclusion: These studies validate a simple method to interrogate PTEN status in clinical specimens and support the utility of this test in future multicenter studies, clinical trials, and ultimately perhaps for routine clinical care. Clin Cancer Res; 17(20); 6563–73. ©2011 AACR.
Author De Marzo, Angelo M.
Hicks, Jessica L.
Lotan, Tamara L.
Park, Ben H.
Netto, George J.
Humphreys, Elizabeth
Partin, Alan W.
Sutcliffe, Siobhan
Liu, Wennuan
Xu, Jianfeng
Isaacs, William B.
Gurel, Bora
Esopi, David
Han, Misop
AuthorAffiliation 4 Department of Oncology, Johns Hopkins Medical Institutions, Baltimore, MD
1 Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD
2 Division of Public Health Sciences, Department of Surgery, Washington University School of Medicine, St. Louis, MO
3 Center for Genomics and Personalized Medicine Research, Wake Forest University School of Medicine, Winston-Salem, NC
5 Department of Urology, Johns Hopkins Medical Institutions, Baltimore, MD
AuthorAffiliation_xml – name: 3 Center for Genomics and Personalized Medicine Research, Wake Forest University School of Medicine, Winston-Salem, NC
– name: 4 Department of Oncology, Johns Hopkins Medical Institutions, Baltimore, MD
– name: 5 Department of Urology, Johns Hopkins Medical Institutions, Baltimore, MD
– name: 2 Division of Public Health Sciences, Department of Surgery, Washington University School of Medicine, St. Louis, MO
– name: 1 Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD
Author_xml – sequence: 1
  givenname: Tamara L.
  surname: Lotan
  fullname: Lotan, Tamara L.
– sequence: 2
  givenname: Bora
  surname: Gurel
  fullname: Gurel, Bora
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  surname: Sutcliffe
  fullname: Sutcliffe, Siobhan
– sequence: 4
  givenname: David
  surname: Esopi
  fullname: Esopi, David
– sequence: 5
  givenname: Wennuan
  surname: Liu
  fullname: Liu, Wennuan
– sequence: 6
  givenname: Jianfeng
  surname: Xu
  fullname: Xu, Jianfeng
– sequence: 7
  givenname: Jessica L.
  surname: Hicks
  fullname: Hicks, Jessica L.
– sequence: 8
  givenname: Ben H.
  surname: Park
  fullname: Park, Ben H.
– sequence: 9
  givenname: Elizabeth
  surname: Humphreys
  fullname: Humphreys, Elizabeth
– sequence: 10
  givenname: Alan W.
  surname: Partin
  fullname: Partin, Alan W.
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  surname: Han
  fullname: Han, Misop
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  fullname: Netto, George J.
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  fullname: Isaacs, William B.
– sequence: 14
  givenname: Angelo M.
  surname: De Marzo
  fullname: De Marzo, Angelo M.
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Issue 20
Keywords Human
Immunohistochemistry
Validation
High risk
Urinary system disease
Prognosis
Prostate disease
Patient
Malignant tumor
Protein
Anatomic pathology
Treatment
Surgery
Cohort study
PTEN Gene
Male genital diseases
Prostate cancer
Public health
Cancer
Tumor suppressor gene
Language English
License CC BY 4.0
2011 AACR.
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  start-page: 8275
  year: 2009
  ident: 2022061023164078900_bib32
  article-title: Deletion of PTEN promotes tumorigenic signaling, resistance to anoikis, and altered response to chemotherapeutic agents in human mammary epithelial cells
  publication-title: Cancer Res
  doi: 10.1158/0008-5472.CAN-09-1067
SSID ssj0014104
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Snippet Purpose: Analytically validated assays to interrogate biomarker status in clinical samples are crucial for personalized medicine. PTEN is a tumor suppressor...
Analytically validated assays to interrogate biomarker status in clinical samples are crucial for personalized medicine. PTEN is a tumor suppressor commonly...
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StartPage 6563
SubjectTerms Antineoplastic agents
Biological and medical sciences
Cell Line, Tumor
Cohort Studies
Formaldehyde
Gene Deletion
Gynecology. Andrology. Obstetrics
Humans
Immunohistochemistry - methods
Male
Male genital diseases
Medical sciences
Nephrology. Urinary tract diseases
Paraffin Embedding
Pharmacology. Drug treatments
Prognosis
Prostatic Neoplasms - diagnosis
Prostatic Neoplasms - metabolism
Prostatic Neoplasms - surgery
PTEN Phosphohydrolase - analysis
PTEN Phosphohydrolase - genetics
Tumors
Tumors of the urinary system
Urinary tract. Prostate gland
Title PTEN Protein Loss by Immunostaining: Analytic Validation and Prognostic Indicator for a High Risk Surgical Cohort of Prostate Cancer Patients
URI https://www.ncbi.nlm.nih.gov/pubmed/21878536
https://www.proquest.com/docview/898840507
https://pubmed.ncbi.nlm.nih.gov/PMC3195839
Volume 17
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