PTEN Protein Loss by Immunostaining: Analytic Validation and Prognostic Indicator for a High Risk Surgical Cohort of Prostate Cancer Patients
Purpose: Analytically validated assays to interrogate biomarker status in clinical samples are crucial for personalized medicine. PTEN is a tumor suppressor commonly inactivated in prostate cancer that has been mechanistically linked to disease aggressiveness. Though deletion of PTEN, as detected by...
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Published in | Clinical cancer research Vol. 17; no. 20; pp. 6563 - 6573 |
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Main Authors | , , , , , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
Philadelphia, PA
American Association for Cancer Research
15.10.2011
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Subjects | |
Online Access | Get full text |
ISSN | 1078-0432 1557-3265 1557-3265 1078-0432 |
DOI | 10.1158/1078-0432.CCR-11-1244 |
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Abstract | Purpose: Analytically validated assays to interrogate biomarker status in clinical samples are crucial for personalized medicine. PTEN is a tumor suppressor commonly inactivated in prostate cancer that has been mechanistically linked to disease aggressiveness. Though deletion of PTEN, as detected by cumbersome FISH spot counting assays, is associated with poor prognosis, few studies have validated immunohistochemistry (IHC) assays to determine whether loss of PTEN protein is associated with unfavorable disease.
Experimental Design: PTEN IHC was validated by employing formalin fixed and paraffin-embedded isogenic human cell lines containing or lacking intact PTEN alleles. PTEN IHC was 100% sensitive and 97.8% specific for detecting genomic alterations in 58 additional cell lines. PTEN protein loss was then assessed on 376 prostate tumor samples, and PTEN FISH or high resolution single nucleotide polymorphism microarray analysis was done on a subset of these cases.
Results: PTEN protein loss, as assessed as a dichotomous IHC variable, was highly reproducible, correlated strongly with adverse pathologic features (e.g., Gleason score and pathologic stage), detected between 75% and 86% of cases with PTEN genomic loss, and was found at times in the absence of apparent genomic loss. In a cohort of 217 high risk surgically treated patients, PTEN protein loss was associated with decreased time to metastasis.
Conclusion: These studies validate a simple method to interrogate PTEN status in clinical specimens and support the utility of this test in future multicenter studies, clinical trials, and ultimately perhaps for routine clinical care. Clin Cancer Res; 17(20); 6563–73. ©2011 AACR. |
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AbstractList | Analytically validated assays to interrogate biomarker status in clinical samples are crucial for personalized medicine. PTEN is a tumor suppressor commonly inactivated in prostate cancer that has been mechanistically linked to disease aggressiveness. Though deletion of PTEN, as detected by cumbersome FISH spot counting assays, is associated with poor prognosis, few studies have validated immunohistochemistry (IHC) assays to determine whether loss of PTEN protein is associated with unfavorable disease.
PTEN IHC was validated by employing formalin fixed and paraffin-embedded isogenic human cell lines containing or lacking intact PTEN alleles. PTEN IHC was 100% sensitive and 97.8% specific for detecting genomic alterations in 58 additional cell lines. PTEN protein loss was then assessed on 376 prostate tumor samples, and PTEN FISH or high resolution single nucleotide polymorphism microarray analysis was done on a subset of these cases.
PTEN protein loss, as assessed as a dichotomous IHC variable, was highly reproducible, correlated strongly with adverse pathologic features (e.g., Gleason score and pathologic stage), detected between 75% and 86% of cases with PTEN genomic loss, and was found at times in the absence of apparent genomic loss. In a cohort of 217 high risk surgically treated patients, PTEN protein loss was associated with decreased time to metastasis.
These studies validate a simple method to interrogate PTEN status in clinical specimens and support the utility of this test in future multicenter studies, clinical trials, and ultimately perhaps for routine clinical care. Analytically validated assays to interrogate biomarker status in clinical samples are crucial for personalized medicine. PTEN is a tumor suppressor commonly inactivated in prostate cancer that has been mechanistically linked to disease aggressiveness. Though deletion of PTEN, as detected by cumbersome FISH spot counting assays, is associated with poor prognosis, few studies have validated immunohistochemistry (IHC) assays to determine whether loss of PTEN protein is associated with unfavorable disease.PURPOSEAnalytically validated assays to interrogate biomarker status in clinical samples are crucial for personalized medicine. PTEN is a tumor suppressor commonly inactivated in prostate cancer that has been mechanistically linked to disease aggressiveness. Though deletion of PTEN, as detected by cumbersome FISH spot counting assays, is associated with poor prognosis, few studies have validated immunohistochemistry (IHC) assays to determine whether loss of PTEN protein is associated with unfavorable disease.PTEN IHC was validated by employing formalin fixed and paraffin-embedded isogenic human cell lines containing or lacking intact PTEN alleles. PTEN IHC was 100% sensitive and 97.8% specific for detecting genomic alterations in 58 additional cell lines. PTEN protein loss was then assessed on 376 prostate tumor samples, and PTEN FISH or high resolution single nucleotide polymorphism microarray analysis was done on a subset of these cases.EXPERIMENTAL DESIGNPTEN IHC was validated by employing formalin fixed and paraffin-embedded isogenic human cell lines containing or lacking intact PTEN alleles. PTEN IHC was 100% sensitive and 97.8% specific for detecting genomic alterations in 58 additional cell lines. PTEN protein loss was then assessed on 376 prostate tumor samples, and PTEN FISH or high resolution single nucleotide polymorphism microarray analysis was done on a subset of these cases.PTEN protein loss, as assessed as a dichotomous IHC variable, was highly reproducible, correlated strongly with adverse pathologic features (e.g., Gleason score and pathologic stage), detected between 75% and 86% of cases with PTEN genomic loss, and was found at times in the absence of apparent genomic loss. In a cohort of 217 high risk surgically treated patients, PTEN protein loss was associated with decreased time to metastasis.RESULTSPTEN protein loss, as assessed as a dichotomous IHC variable, was highly reproducible, correlated strongly with adverse pathologic features (e.g., Gleason score and pathologic stage), detected between 75% and 86% of cases with PTEN genomic loss, and was found at times in the absence of apparent genomic loss. In a cohort of 217 high risk surgically treated patients, PTEN protein loss was associated with decreased time to metastasis.These studies validate a simple method to interrogate PTEN status in clinical specimens and support the utility of this test in future multicenter studies, clinical trials, and ultimately perhaps for routine clinical care.CONCLUSIONThese studies validate a simple method to interrogate PTEN status in clinical specimens and support the utility of this test in future multicenter studies, clinical trials, and ultimately perhaps for routine clinical care. Purpose: Analytically validated assays to interrogate biomarker status in clinical samples are crucial for personalized medicine. PTEN is a tumor suppressor commonly inactivated in prostate cancer that has been mechanistically linked to disease aggressiveness. Though deletion of PTEN, as detected by cumbersome FISH spot counting assays, is associated with poor prognosis, few studies have validated immunohistochemistry (IHC) assays to determine whether loss of PTEN protein is associated with unfavorable disease. Experimental Design: PTEN IHC was validated by employing formalin fixed and paraffin-embedded isogenic human cell lines containing or lacking intact PTEN alleles. PTEN IHC was 100% sensitive and 97.8% specific for detecting genomic alterations in 58 additional cell lines. PTEN protein loss was then assessed on 376 prostate tumor samples, and PTEN FISH or high resolution single nucleotide polymorphism microarray analysis was done on a subset of these cases. Results: PTEN protein loss, as assessed as a dichotomous IHC variable, was highly reproducible, correlated strongly with adverse pathologic features (e.g., Gleason score and pathologic stage), detected between 75% and 86% of cases with PTEN genomic loss, and was found at times in the absence of apparent genomic loss. In a cohort of 217 high risk surgically treated patients, PTEN protein loss was associated with decreased time to metastasis. Conclusion: These studies validate a simple method to interrogate PTEN status in clinical specimens and support the utility of this test in future multicenter studies, clinical trials, and ultimately perhaps for routine clinical care. Clin Cancer Res; 17(20); 6563–73. ©2011 AACR. |
Author | De Marzo, Angelo M. Hicks, Jessica L. Lotan, Tamara L. Park, Ben H. Netto, George J. Humphreys, Elizabeth Partin, Alan W. Sutcliffe, Siobhan Liu, Wennuan Xu, Jianfeng Isaacs, William B. Gurel, Bora Esopi, David Han, Misop |
AuthorAffiliation | 4 Department of Oncology, Johns Hopkins Medical Institutions, Baltimore, MD 1 Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD 2 Division of Public Health Sciences, Department of Surgery, Washington University School of Medicine, St. Louis, MO 3 Center for Genomics and Personalized Medicine Research, Wake Forest University School of Medicine, Winston-Salem, NC 5 Department of Urology, Johns Hopkins Medical Institutions, Baltimore, MD |
AuthorAffiliation_xml | – name: 3 Center for Genomics and Personalized Medicine Research, Wake Forest University School of Medicine, Winston-Salem, NC – name: 4 Department of Oncology, Johns Hopkins Medical Institutions, Baltimore, MD – name: 5 Department of Urology, Johns Hopkins Medical Institutions, Baltimore, MD – name: 2 Division of Public Health Sciences, Department of Surgery, Washington University School of Medicine, St. Louis, MO – name: 1 Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD |
Author_xml | – sequence: 1 givenname: Tamara L. surname: Lotan fullname: Lotan, Tamara L. – sequence: 2 givenname: Bora surname: Gurel fullname: Gurel, Bora – sequence: 3 givenname: Siobhan surname: Sutcliffe fullname: Sutcliffe, Siobhan – sequence: 4 givenname: David surname: Esopi fullname: Esopi, David – sequence: 5 givenname: Wennuan surname: Liu fullname: Liu, Wennuan – sequence: 6 givenname: Jianfeng surname: Xu fullname: Xu, Jianfeng – sequence: 7 givenname: Jessica L. surname: Hicks fullname: Hicks, Jessica L. – sequence: 8 givenname: Ben H. surname: Park fullname: Park, Ben H. – sequence: 9 givenname: Elizabeth surname: Humphreys fullname: Humphreys, Elizabeth – sequence: 10 givenname: Alan W. surname: Partin fullname: Partin, Alan W. – sequence: 11 givenname: Misop surname: Han fullname: Han, Misop – sequence: 12 givenname: George J. surname: Netto fullname: Netto, George J. – sequence: 13 givenname: William B. surname: Isaacs fullname: Isaacs, William B. – sequence: 14 givenname: Angelo M. surname: De Marzo fullname: De Marzo, Angelo M. |
BackLink | http://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=24611755$$DView record in Pascal Francis https://www.ncbi.nlm.nih.gov/pubmed/21878536$$D View this record in MEDLINE/PubMed |
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ContentType | Journal Article |
Copyright | 2015 INIST-CNRS 2011 AACR. |
Copyright_xml | – notice: 2015 INIST-CNRS – notice: 2011 AACR. |
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Keywords | Human Immunohistochemistry Validation High risk Urinary system disease Prognosis Prostate disease Patient Malignant tumor Protein Anatomic pathology Treatment Surgery Cohort study PTEN Gene Male genital diseases Prostate cancer Public health Cancer Tumor suppressor gene |
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Snippet | Purpose: Analytically validated assays to interrogate biomarker status in clinical samples are crucial for personalized medicine. PTEN is a tumor suppressor... Analytically validated assays to interrogate biomarker status in clinical samples are crucial for personalized medicine. PTEN is a tumor suppressor commonly... |
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SubjectTerms | Antineoplastic agents Biological and medical sciences Cell Line, Tumor Cohort Studies Formaldehyde Gene Deletion Gynecology. Andrology. Obstetrics Humans Immunohistochemistry - methods Male Male genital diseases Medical sciences Nephrology. Urinary tract diseases Paraffin Embedding Pharmacology. Drug treatments Prognosis Prostatic Neoplasms - diagnosis Prostatic Neoplasms - metabolism Prostatic Neoplasms - surgery PTEN Phosphohydrolase - analysis PTEN Phosphohydrolase - genetics Tumors Tumors of the urinary system Urinary tract. Prostate gland |
Title | PTEN Protein Loss by Immunostaining: Analytic Validation and Prognostic Indicator for a High Risk Surgical Cohort of Prostate Cancer Patients |
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