VC@Scale: Scalable and high-performance variant calling on cluster environments - Ahmad, Tanveer; Al Ars, Zaid; Hofstee, H Peter (Gigascience, 2021)
Keywords: Algorithms; Big Data; Central processing units; Clusters; Computer applications; Computer memory; CPUs; Data processing; Deep learning; High performance computing; High-Throughput Nucleotide Sequencing - methods; Machine learning; Next-generation sequencing; Resource utilization; Software; Storage; Technical Note; Whole genome sequencing; Workflow; whole-genome sequencing; sorting; MarkDuplicate; DeepVariant; BWA-MEM; Apache Spark; Apache Arrow