The Design of SimpleITK
SimpleITK is a new interface to the Insight Segmentation and Registration Toolkit (ITK) designed to facilitate rapid prototyping, education and scientific activities via high level programming languages. ITK is a templated C++ library of image processing algorithms and frameworks for biomedical and...
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| Published in | Frontiers in neuroinformatics Vol. 7; p. 45 |
|---|---|
| Main Authors | , , , |
| Format | Journal Article |
| Language | English |
| Published |
Switzerland
Frontiers Research Foundation
01.01.2013
Frontiers Media S.A |
| Subjects | |
| Online Access | Get full text |
| ISSN | 1662-5196 1662-5196 |
| DOI | 10.3389/fninf.2013.00045 |
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| Abstract | SimpleITK is a new interface to the Insight Segmentation and Registration Toolkit (ITK) designed to facilitate rapid prototyping, education and scientific activities via high level programming languages. ITK is a templated C++ library of image processing algorithms and frameworks for biomedical and other applications, and it was designed to be generic, flexible and extensible. Initially, ITK provided a direct wrapping interface to languages such as Python and Tcl through the WrapITK system. Unlike WrapITK, which exposed ITK's complex templated interface, SimpleITK was designed to provide an easy to use and simplified interface to ITK's algorithms. It includes procedural methods, hides ITK's demand driven pipeline, and provides a template-less layer. Also SimpleITK provides practical conveniences such as binary distribution packages and overloaded operators. Our user-friendly design goals dictated a departure from the direct interface wrapping approach of WrapITK, toward a new facade class structure that only exposes the required functionality, hiding ITK's extensive template use. Internally SimpleITK utilizes a manual description of each filter with code-generation and advanced C++ meta-programming to provide the higher-level interface, bringing the capabilities of ITK to a wider audience. SimpleITK is licensed as open source software library under the Apache License Version 2.0 and more information about downloading it can be found at http://www.simpleitk.org. |
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| AbstractList | SimpleITK is a new interface to the Insight Segmentation and Registration Toolkit (ITK) designed to facilitate rapid prototyping, education and scientific activities via high level programming languages. ITK is a templated C++ library of image processing algorithms and frameworks for biomedical and other applications, and it was designed to be generic, flexible and extensible. Initially, ITK provided a direct wrapping interface to languages such as Python and Tcl through the WrapITK system. Unlike WrapITK, which exposed ITK's complex templated interface, SimpleITK was designed to provide an easy to use and simplified interface to ITK's algorithms. It includes procedural methods, hides ITK's demand driven pipeline, and provides a template-less layer. Also SimpleITK provides practical conveniences such as binary distribution packages and overloaded operators. Our user-friendly design goals dictated a departure from the direct interface wrapping approach of WrapITK, toward a new facade class structure that only exposes the required functionality, hiding ITK's extensive template use. Internally SimpleITK utilizes a manual description of each filter with code-generation and advanced C++ meta-programming to provide the higher-level interface, bringing the capabilities of ITK to a wider audience. SimpleITK is licensed as open source software library under the Apache License Version 2.0 and more information about downloading it can be found at http://www.simpleitk.org.SimpleITK is a new interface to the Insight Segmentation and Registration Toolkit (ITK) designed to facilitate rapid prototyping, education and scientific activities via high level programming languages. ITK is a templated C++ library of image processing algorithms and frameworks for biomedical and other applications, and it was designed to be generic, flexible and extensible. Initially, ITK provided a direct wrapping interface to languages such as Python and Tcl through the WrapITK system. Unlike WrapITK, which exposed ITK's complex templated interface, SimpleITK was designed to provide an easy to use and simplified interface to ITK's algorithms. It includes procedural methods, hides ITK's demand driven pipeline, and provides a template-less layer. Also SimpleITK provides practical conveniences such as binary distribution packages and overloaded operators. Our user-friendly design goals dictated a departure from the direct interface wrapping approach of WrapITK, toward a new facade class structure that only exposes the required functionality, hiding ITK's extensive template use. Internally SimpleITK utilizes a manual description of each filter with code-generation and advanced C++ meta-programming to provide the higher-level interface, bringing the capabilities of ITK to a wider audience. SimpleITK is licensed as open source software library under the Apache License Version 2.0 and more information about downloading it can be found at http://www.simpleitk.org. SimpleITK is a new interface to the Insight Segmentation andRegistration Toolkit (ITK) designed to facilitate rapid prototyping, educationand scientific activities, via high level programminglanguages. ITK is a templated C++ library of image processingalgorithms and frameworks for biomedical and other applications, andit was designed to be generic, flexible and extensible. Initially, ITKprovided a direct wrapping interface to languages such as Python andTcl through the WrapITK system. Unlike WrapITK, which exposed ITK'scomplex templated interface, SimpleITK was designed to provide an easyto use and simplified interface to ITK's algorithms. It includesprocedural methods, hides ITK's demand driven pipeline, and provides atemplate-less layer. Also SimpleITK provides practical conveniencessuch as binary distribution packages and overloaded operators. Ouruser-friendly design goals dictated a departure from the directinterface wrapping approach of WrapITK, towards a new facadeclass structure that only exposes the required functionality, hidingITK's extensive template use. Internally SimpleITK utilizes a manualdescription of each filter with code-generation and advanced C++meta-programming to provide the higher-level interface, bringing thecapabilities of ITK to a wider audience. SimpleITK is licensed asopen source software under the Apache License Version 2.0 and more informationabout downloading it can be found at http://www.simpleitk.org. SimpleITK is a new interface to the Insight Segmentation and Registration Toolkit (ITK) designed to facilitate rapid prototyping, education and scientific activities via high level programming languages. ITK is a templated C++ library of image processing algorithms and frameworks for biomedical and other applications, and it was designed to be generic, flexible and extensible. Initially, ITK provided a direct wrapping interface to languages such as Python and Tcl through the WrapITK system. Unlike WrapITK, which exposed ITK's complex templated interface, SimpleITK was designed to provide an easy to use and simplified interface to ITK's algorithms. It includes procedural methods, hides ITK's demand driven pipeline, and provides a template-less layer. Also SimpleITK provides practical conveniences such as binary distribution packages and overloaded operators. Our user-friendly design goals dictated a departure from the direct interface wrapping approach of WrapITK, toward a new facade class structure that only exposes the required functionality, hiding ITK's extensive template use. Internally SimpleITK utilizes a manual description of each filter with code-generation and advanced C++ meta-programming to provide the higher-level interface, bringing the capabilities of ITK to a wider audience. SimpleITK is licensed as open source software library under the Apache License Version 2.0 and more information about downloading it can be found at http://www.simpleitk.org. |
| Author | Blezek, Daniel Lowekamp, Bradley C. Chen, David T. Ibáñez, Luis |
| AuthorAffiliation | 4 Biomedical Engineering Department, Mayo Graduate School of Medicine Rochester, MN, USA 1 National Library of Medicine, Office of High Performance Computing and Communications, National Institutes of Health Bethesda, MD, USA 3 Kitware Inc. Clifton Park, NY, USA 2 Medical Science and Computing Rockville, MD, USA |
| AuthorAffiliation_xml | – name: 3 Kitware Inc. Clifton Park, NY, USA – name: 4 Biomedical Engineering Department, Mayo Graduate School of Medicine Rochester, MN, USA – name: 1 National Library of Medicine, Office of High Performance Computing and Communications, National Institutes of Health Bethesda, MD, USA – name: 2 Medical Science and Computing Rockville, MD, USA |
| Author_xml | – sequence: 1 givenname: Bradley C. surname: Lowekamp fullname: Lowekamp, Bradley C. – sequence: 2 givenname: David T. surname: Chen fullname: Chen, David T. – sequence: 3 givenname: Luis surname: Ibáñez fullname: Ibáñez, Luis – sequence: 4 givenname: Daniel surname: Blezek fullname: Blezek, Daniel |
| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/24416015$$D View this record in MEDLINE/PubMed |
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| Copyright | 2013. This work is licensed under http://creativecommons.org/licenses/by/3.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. Copyright © 2013 Lowekamp, Chen, Ibáñez and Blezek. 2013 |
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| Keywords | segmentation Insight Toolkit image processing software software development software design image processing and analysis |
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| References | 22770690 - Magn Reson Imaging. 2012 Nov;30(9):1323-41 22003676 - Med Image Comput Comput Assist Interv. 2011;14(Pt 1):670-7 8156534 - Comput Med Imaging Graph. 1994 Jan-Feb;18(1):25-34 15458157 - Stud Health Technol Inform. 2002;85:586-92 21907806 - J Struct Biol. 2011 Dec;176(3):268-78 10698818 - Am J Psychiatry. 2000 Mar;157(3):416-21 |
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| Snippet | SimpleITK is a new interface to the Insight Segmentation and Registration Toolkit (ITK) designed to facilitate rapid prototyping, education and scientific... SimpleITK is a new interface to the Insight Segmentation andRegistration Toolkit (ITK) designed to facilitate rapid prototyping, educationand scientific... |
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| SubjectTerms | Algorithms American Recovery & Reinvestment Act 2009-US Brain research C plus plus Design Image processing image processing and analysis Image Processing Software interactive Itk protein Medicine Microscopy National libraries Neuroscience Open source software Product development Public domain Registration Segmentation Software Design Software Development |
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| Title | The Design of SimpleITK |
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