Data mining for sex estimation based on cranial measurements

•Machine learning algorithms are useful sex classifiers.•Classification rules and decision trees provide high accuracy rates.•The best sex classification accuracy is 91.9 %.•Nonstandard cranial measurements can be used for sex estimation. The aim of the present study is to develop effective and unde...

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Published inForensic science international Vol. 315; p. 110441
Main Authors Toneva, Diana H., Nikolova, Silviya Y., Agre, Gennady P., Zlatareva, Dora K., Hadjidekov, Vassil G., Lazarov, Nikolai E.
Format Journal Article
LanguageEnglish
Published Ireland Elsevier B.V 01.10.2020
Elsevier Limited
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Online AccessGet full text
ISSN0379-0738
1872-6283
1872-6283
DOI10.1016/j.forsciint.2020.110441

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Abstract •Machine learning algorithms are useful sex classifiers.•Classification rules and decision trees provide high accuracy rates.•The best sex classification accuracy is 91.9 %.•Nonstandard cranial measurements can be used for sex estimation. The aim of the present study is to develop effective and understandable classification models for sex estimation and to identify the most dimorphic linear measurements in adult crania by means of data mining techniques. Furthermore, machine learning models and models developed through logistic regression analysis are compared in terms of performance. Computed tomography scans of 393 adult individuals were used in the study. A landmark-based approach was applied to collect the metric data. The three-dimensional coordinates of 47 landmarks were acquired and used for calculation of linear measurements. Two datasets of cranial measurements were assembled, including 37standard measurements and 1081 interlandmark distances, respectively. Three data mining algorithms were applied: the rule induction algorithms JRIP and Ridor, and the decision tree algorithm J48. Two advanced attribute selection methods (Weka BestFirst and Weka GeneticSearch) were also used. The best accuracy result (91.9 %) was achieved by a set of rules learnt by the JRIP algorithm from the dataset constructed by application of the GeneticSearch selection algorithm to the dataset of standard cranial measurements. The set consisted of five rules including seven cranial measurements. Its accuracy was even better than the classification rates achieved by the logistic regression models. Concerning the second dataset of nonstandard measurements, the best accuracy (88.3 %) was obtained by using classification models learnt by two algorithms – JRIP with a dataset preprocessed by the BestFirst selection algorithm and Ridor with preprocessing by the GeneticSearch selection algorithm. Our experiments show that for the two datasets mentioned above the rule-based models contain smaller sets of rules with shorter lists of measurements and achieve better classification accuracy results in comparison with decision tree-based models.
AbstractList •Machine learning algorithms are useful sex classifiers.•Classification rules and decision trees provide high accuracy rates.•The best sex classification accuracy is 91.9 %.•Nonstandard cranial measurements can be used for sex estimation. The aim of the present study is to develop effective and understandable classification models for sex estimation and to identify the most dimorphic linear measurements in adult crania by means of data mining techniques. Furthermore, machine learning models and models developed through logistic regression analysis are compared in terms of performance. Computed tomography scans of 393 adult individuals were used in the study. A landmark-based approach was applied to collect the metric data. The three-dimensional coordinates of 47 landmarks were acquired and used for calculation of linear measurements. Two datasets of cranial measurements were assembled, including 37standard measurements and 1081 interlandmark distances, respectively. Three data mining algorithms were applied: the rule induction algorithms JRIP and Ridor, and the decision tree algorithm J48. Two advanced attribute selection methods (Weka BestFirst and Weka GeneticSearch) were also used. The best accuracy result (91.9 %) was achieved by a set of rules learnt by the JRIP algorithm from the dataset constructed by application of the GeneticSearch selection algorithm to the dataset of standard cranial measurements. The set consisted of five rules including seven cranial measurements. Its accuracy was even better than the classification rates achieved by the logistic regression models. Concerning the second dataset of nonstandard measurements, the best accuracy (88.3 %) was obtained by using classification models learnt by two algorithms – JRIP with a dataset preprocessed by the BestFirst selection algorithm and Ridor with preprocessing by the GeneticSearch selection algorithm. Our experiments show that for the two datasets mentioned above the rule-based models contain smaller sets of rules with shorter lists of measurements and achieve better classification accuracy results in comparison with decision tree-based models.
The aim of the present study is to develop effective and understandable classification models for sex estimation and to identify the most dimorphic linear measurements in adult crania by means of data mining techniques. Furthermore, machine learning models and models developed through logistic regression analysis are compared in terms of performance. Computed tomography scans of 393 adult individuals were used in the study. A landmark-based approach was applied to collect the metric data. The three-dimensional coordinates of 47 landmarks were acquired and used for calculation of linear measurements. Two datasets of cranial measurements were assembled, including 37standard measurements and 1081 interlandmark distances, respectively. Three data mining algorithms were applied: the rule induction algorithms JRIP and Ridor, and the decision tree algorithm J48. Two advanced attribute selection methods (Weka BestFirst and Weka GeneticSearch) were also used. The best accuracy result (91.9 %) was achieved by a set of rules learnt by the JRIP algorithm from the dataset constructed by application of the GeneticSearch selection algorithm to the dataset of standard cranial measurements. The set consisted of five rules including seven cranial measurements. Its accuracy was even better than the classification rates achieved by the logistic regression models. Concerning the second dataset of nonstandard measurements, the best accuracy (88.3 %) was obtained by using classification models learnt by two algorithms - JRIP with a dataset preprocessed by the BestFirst selection algorithm and Ridor with preprocessing by the GeneticSearch selection algorithm. Our experiments show that for the two datasets mentioned above the rule-based models contain smaller sets of rules with shorter lists of measurements and achieve better classification accuracy results in comparison with decision tree-based models.
The aim of the present study is to develop effective and understandable classification models for sex estimation and to identify the most dimorphic linear measurements in adult crania by means of data mining techniques. Furthermore, machine learning models and models developed through logistic regression analysis are compared in terms of performance. Computed tomography scans of 393 adult individuals were used in the study. A landmark-based approach was applied to collect the metric data. The three-dimensional coordinates of 47 landmarks were acquired and used for calculation of linear measurements. Two datasets of cranial measurements were assembled, including 37standard measurements and 1081 interlandmark distances, respectively. Three data mining algorithms were applied: the rule induction algorithms JRIP and Ridor, and the decision tree algorithm J48. Two advanced attribute selection methods (Weka BestFirst and Weka GeneticSearch) were also used. The best accuracy result (91.9 %) was achieved by a set of rules learnt by the JRIP algorithm from the dataset constructed by application of the GeneticSearch selection algorithm to the dataset of standard cranial measurements. The set consisted of five rules including seven cranial measurements. Its accuracy was even better than the classification rates achieved by the logistic regression models. Concerning the second dataset of nonstandard measurements, the best accuracy (88.3 %) was obtained by using classification models learnt by two algorithms - JRIP with a dataset preprocessed by the BestFirst selection algorithm and Ridor with preprocessing by the GeneticSearch selection algorithm. Our experiments show that for the two datasets mentioned above the rule-based models contain smaller sets of rules with shorter lists of measurements and achieve better classification accuracy results in comparison with decision tree-based models.The aim of the present study is to develop effective and understandable classification models for sex estimation and to identify the most dimorphic linear measurements in adult crania by means of data mining techniques. Furthermore, machine learning models and models developed through logistic regression analysis are compared in terms of performance. Computed tomography scans of 393 adult individuals were used in the study. A landmark-based approach was applied to collect the metric data. The three-dimensional coordinates of 47 landmarks were acquired and used for calculation of linear measurements. Two datasets of cranial measurements were assembled, including 37standard measurements and 1081 interlandmark distances, respectively. Three data mining algorithms were applied: the rule induction algorithms JRIP and Ridor, and the decision tree algorithm J48. Two advanced attribute selection methods (Weka BestFirst and Weka GeneticSearch) were also used. The best accuracy result (91.9 %) was achieved by a set of rules learnt by the JRIP algorithm from the dataset constructed by application of the GeneticSearch selection algorithm to the dataset of standard cranial measurements. The set consisted of five rules including seven cranial measurements. Its accuracy was even better than the classification rates achieved by the logistic regression models. Concerning the second dataset of nonstandard measurements, the best accuracy (88.3 %) was obtained by using classification models learnt by two algorithms - JRIP with a dataset preprocessed by the BestFirst selection algorithm and Ridor with preprocessing by the GeneticSearch selection algorithm. Our experiments show that for the two datasets mentioned above the rule-based models contain smaller sets of rules with shorter lists of measurements and achieve better classification accuracy results in comparison with decision tree-based models.
ArticleNumber 110441
Author Agre, Gennady P.
Zlatareva, Dora K.
Lazarov, Nikolai E.
Toneva, Diana H.
Nikolova, Silviya Y.
Hadjidekov, Vassil G.
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BackLink https://www.ncbi.nlm.nih.gov/pubmed/32781389$$D View this record in MEDLINE/PubMed
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Keywords Classification rules
Sex estimation
Decision trees
Machine learning
Forensic anthropology population data
Cranial measurements
Language English
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Snippet •Machine learning algorithms are useful sex classifiers.•Classification rules and decision trees provide high accuracy rates.•The best sex classification...
The aim of the present study is to develop effective and understandable classification models for sex estimation and to identify the most dimorphic linear...
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crossref
elsevier
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StartPage 110441
SubjectTerms Accuracy
Adolescent
Adult
adults
Age
Aged
Aged, 80 and over
Algorithms
Anatomic Landmarks
Bones
Cephalometry
Classification
Classification rules
Computed tomography
Cranial measurements
data collection
Data mining
Data Mining - methods
Data processing
Datasets
decision support systems
Decision Trees
Digitization
Exports
Forensic anthropology
Forensic Anthropology - methods
Forensic anthropology population data
Forensic sciences
Gender differences
Humans
Imaging, Three-Dimensional
Learning algorithms
Logistic Models
Machine Learning
Methods
Middle Aged
Regression analysis
Regression models
Rule induction
Sex
Sex Determination by Skeleton - methods
Sex estimation
Sexes
Skull
Skull - anatomy & histology
Skull - diagnostic imaging
Software
Support vector machines
Tomography, X-Ray Computed
Young Adult
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  priority: 102
  providerName: Elsevier
Title Data mining for sex estimation based on cranial measurements
URI https://www.clinicalkey.com/#!/content/1-s2.0-S0379073820303030
https://dx.doi.org/10.1016/j.forsciint.2020.110441
https://www.ncbi.nlm.nih.gov/pubmed/32781389
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