Using contexts and R–R interval estimation in lossless ECG compression
The paper presents a new lossless ECG compression scheme. The short-term predictor and the coder use conditioning on a small number of contexts. The long-term prediction is based on an algorithm for R–R interval estimation. Several QRS detection algorithms are investigated to select a low complexity...
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| Published in | Computer methods and programs in biomedicine Vol. 67; no. 3; pp. 177 - 186 |
|---|---|
| Main Authors | , , |
| Format | Journal Article |
| Language | English |
| Published |
Shannon
Elsevier Ireland Ltd
01.03.2002
Elsevier Science |
| Subjects | |
| Online Access | Get full text |
| ISSN | 0169-2607 1872-7565 |
| DOI | 10.1016/S0169-2607(01)00126-2 |
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| Abstract | The paper presents a new lossless ECG compression scheme. The short-term predictor and the coder use conditioning on a small number of contexts. The long-term prediction is based on an algorithm for
R–R interval estimation. Several QRS detection algorithms are investigated to select a low complexity and reliable detection algorithm. The coding of prediction residuals uses primarily the Golomb-Rice (GR) codes, but, to improve the coding results, escape codes GR–ESC are used in some contexts for a limited number of samples. Experimental results indicate the good overall performance of the lossless ECG compression algorithms (reducing the storage needs from 12 to about 3–4 bits per sample). The scheme consistently outperforms other waveform or general purpose coding algorithms. |
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| AbstractList | The paper presents a new lossless ECG compression scheme. The short-term predictor and the coder use conditioning on a small number of contexts. The long-term prediction is based on an algorithm for R-R interval estimation. Several QRS detection algorithms are investigated to select a low complexity and reliable detection algorithm. The coding of prediction residuals uses primarily the Golomb-Rice (GR) codes, but, to improve the coding results, escape codes GR- ESC are used in some contexts for a limited number of samples. Experimental results indicate the good overall performance of the lossless ECG compression algorithms (reducing the storage needs from 12 to about 3-4 bits per sample). The scheme consistently outperforms other waveform or general purpose coding algorithms. The paper presents a new lossless ECG compression scheme. The short-term predictor and the coder use conditioning on a small number of contexts. The long-term prediction is based on an algorithm for R–R interval estimation. Several QRS detection algorithms are investigated to select a low complexity and reliable detection algorithm. The coding of prediction residuals uses primarily the Golomb-Rice (GR) codes, but, to improve the coding results, escape codes GR–ESC are used in some contexts for a limited number of samples. Experimental results indicate the good overall performance of the lossless ECG compression algorithms (reducing the storage needs from 12 to about 3–4 bits per sample). The scheme consistently outperforms other waveform or general purpose coding algorithms. The paper presents a new lossless ECG compression scheme. The short-term predictor and the coder use conditioning on a small number of contexts. The long-term prediction is based on an algorithm for R-R interval estimation. Several QRS detection algorithms are investigated to select a low complexity and reliable detection algorithm. The coding of prediction residuals uses primarily the Golomb-Rice (GR) codes, but, to improve the coding results, escape codes GR-ESC are used in some contexts for a limited number of samples. Experimental results indicate the good overall performance of the lossless ECG compression algorithms (reducing the storage needs from 12 to about 3-4 bits per sample). The scheme consistently outperforms other waveform or general purpose coding algorithms.The paper presents a new lossless ECG compression scheme. The short-term predictor and the coder use conditioning on a small number of contexts. The long-term prediction is based on an algorithm for R-R interval estimation. Several QRS detection algorithms are investigated to select a low complexity and reliable detection algorithm. The coding of prediction residuals uses primarily the Golomb-Rice (GR) codes, but, to improve the coding results, escape codes GR-ESC are used in some contexts for a limited number of samples. Experimental results indicate the good overall performance of the lossless ECG compression algorithms (reducing the storage needs from 12 to about 3-4 bits per sample). The scheme consistently outperforms other waveform or general purpose coding algorithms. |
| Author | Giurcăneanu, Ciprian Doru Mereuţă, Şerban Tăbuş, Ioan |
| Author_xml | – sequence: 1 givenname: Ciprian Doru surname: GIURCANEANU fullname: GIURCANEANU, Ciprian Doru organization: Signal Processing Laboratory, Tampere University of Technology, P.O. Box 553, Tampere 33101, Finland – sequence: 2 givenname: Ioan surname: TABUS fullname: TABUS, Ioan organization: Signal Processing Laboratory, Tampere University of Technology, P.O. Box 553, Tampere 33101, Finland – sequence: 3 givenname: Serban surname: MEREUTA fullname: MEREUTA, Serban organization: Signal Processing Laboratory, Tampere University of Technology, P.O. Box 553, Tampere 33101, Finland |
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| Cites_doi | 10.1109/51.646227 10.1109/10.43620 10.1109/TIT.1975.1055357 10.1109/TBME.1979.326420 10.1109/DCC.1993.253114 10.1109/DCC.1996.488319 10.1109/10.771194 10.1016/S0165-1684(00)00117-1 10.1016/S0169-2607(96)01779-8 10.1109/10.52340 10.1109/TIT.1966.1053907 10.1109/TBME.1985.325532 10.1109/10.245608 |
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| Keywords | R–R interval Context coding Escape codes Lossless coding Context Human Evaluation Parameter estimation Data compression QRS interval Experimental study Algorithm RR interval Electrodiagnosis Biomedical data processing Coding Electrocardiography Signal processing Detection Biomedical engineering |
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| References_xml | – reference: I. Tăbuş, J. Astola, Adaptive Boolean predictive modelling with application to lossless image coding, SPIE-Statistical and Stochastic Methods for Image Processing II, San Diego, CA, (1997) pp. 234–245. – reference: A. Koski, Lossless ECG encoding, Computer Methods and Programs in Biomedicine, Amsterdam, Elsevier Science, 52 (1) (1997) 23–33. – reference: 1994. – volume: 21 start-page: 228 year: 1975 end-page: 230 ident: BIB7 article-title: Optimal source codes for geometrically distributed integer alphabets publication-title: IEEE Trans. Inform. Theory – reference: P.G. Howard, The design and analysis of efficient lossless data compression systems, Ph.D. thesis, Brown Univ., Department of Computer Science, 1993. – reference: T. Robinson, SHORTEN: simple lossless and near-lossless waveform compression, Technical Report, Cambridge University Engineering Department, – reference: C.D. Giurcăneanu, I. Tăbuş, J. 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| SubjectTerms | Algorithms Biological and medical sciences Computerized, statistical medical data processing and models in biomedicine Context coding Electrocardiography - methods Electrocardiography. Vectocardiography Electrodiagnosis. Electric activity recording Escape codes General aspects. Methods Heart - physiopathology Humans Investigative techniques, diagnostic techniques (general aspects) Lossless coding Medical sciences R–R interval |
| Title | Using contexts and R–R interval estimation in lossless ECG compression |
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