Cerebral organoids derived from patients with Alzheimer’s disease with PSEN1/2 mutations have defective tissue patterning and altered development

During the past two decades, induced pluripotent stem cells (iPSCs) have been widely used to study human neural development and disease. Especially in the field of Alzheimer’s disease (AD), remarkable effort has been put into investigating molecular mechanisms behind this disease. Then, with the adv...

Full description

Saved in:
Bibliographic Details
Published inCell reports (Cambridge) Vol. 42; no. 11; p. 113310
Main Authors Vanova, Tereza, Sedmik, Jiri, Raska, Jan, Amruz Cerna, Katerina, Taus, Petr, Pospisilova, Veronika, Nezvedova, Marketa, Fedorova, Veronika, Kadakova, Sona, Klimova, Hana, Capandova, Michaela, Orviska, Petra, Fojtik, Petr, Bartova, Simona, Plevova, Karla, Spacil, Zdenek, Hribkova, Hana, Bohaciakova, Dasa
Format Journal Article
LanguageEnglish
Published United States Elsevier Inc 28.11.2023
Elsevier
Subjects
Online AccessGet full text
ISSN2211-1247
2639-1856
2211-1247
DOI10.1016/j.celrep.2023.113310

Cover

Abstract During the past two decades, induced pluripotent stem cells (iPSCs) have been widely used to study human neural development and disease. Especially in the field of Alzheimer’s disease (AD), remarkable effort has been put into investigating molecular mechanisms behind this disease. Then, with the advent of 3D neuronal cultures and cerebral organoids (COs), several studies have demonstrated that this model can adequately mimic familial and sporadic AD. Therefore, we created an AD-CO model using iPSCs derived from patients with familial AD forms and explored early events and the progression of AD pathogenesis. Our study demonstrated that COs derived from three AD-iPSC lines with PSEN1(A246E) or PSEN2(N141I) mutations developed the AD-specific markers in vitro, yet they also uncover tissue patterning defects and altered development. These findings are complemented by single-cell sequencing data confirming this observation and uncovering that neurons in AD-COs likely differentiate prematurely. [Display omitted] •Cerebral organoids generated from patients with fAD forms develop AD-like pathology•AD organoids react to β- and γ-secretase inhibitors by decreasing levels of Aβ peptides•AD organoids show developmental and tissue patterning defects•Single-cell-seq data support altered development and the signs of premature differentiation Vanova et al. show that brain organoids differentiated from induced pluripotent stem cells with mutations in PSEN1 and PSEN2 genes mimic the development of Alzheimer’s disease-like pathology in vitro. Curiously, these brain organoids also exhibit developmental and tissue patterning defects, supported by mRNA single-cell sequencing data showing premature neuronal differentiation.
AbstractList During the past two decades, induced pluripotent stem cells (iPSCs) have been widely used to study human neural development and disease. Especially in the field of Alzheimer's disease (AD), remarkable effort has been put into investigating molecular mechanisms behind this disease. Then, with the advent of 3D neuronal cultures and cerebral organoids (COs), several studies have demonstrated that this model can adequately mimic familial and sporadic AD. Therefore, we created an AD-CO model using iPSCs derived from patients with familial AD forms and explored early events and the progression of AD pathogenesis. Our study demonstrated that COs derived from three AD-iPSC lines with PSEN1(A246E) or PSEN2(N141I) mutations developed the AD-specific markers in vitro, yet they also uncover tissue patterning defects and altered development. These findings are complemented by single-cell sequencing data confirming this observation and uncovering that neurons in AD-COs likely differentiate prematurely.During the past two decades, induced pluripotent stem cells (iPSCs) have been widely used to study human neural development and disease. Especially in the field of Alzheimer's disease (AD), remarkable effort has been put into investigating molecular mechanisms behind this disease. Then, with the advent of 3D neuronal cultures and cerebral organoids (COs), several studies have demonstrated that this model can adequately mimic familial and sporadic AD. Therefore, we created an AD-CO model using iPSCs derived from patients with familial AD forms and explored early events and the progression of AD pathogenesis. Our study demonstrated that COs derived from three AD-iPSC lines with PSEN1(A246E) or PSEN2(N141I) mutations developed the AD-specific markers in vitro, yet they also uncover tissue patterning defects and altered development. These findings are complemented by single-cell sequencing data confirming this observation and uncovering that neurons in AD-COs likely differentiate prematurely.
During the past two decades, induced pluripotent stem cells (iPSCs) have been widely used to study human neural development and disease. Especially in the field of Alzheimer's disease (AD), remarkable effort has been put into investigating molecular mechanisms behind this disease. Then, with the advent of 3D neuronal cultures and cerebral organoids (COs), several studies have demonstrated that this model can adequately mimic familial and sporadic AD. Therefore, we created an AD-CO model using iPSCs derived from patients with familial AD forms and explored early events and the progression of AD pathogenesis. Our study demonstrated that COs derived from three AD-iPSC lines with PSEN1(A246E) or PSEN2(N141I) mutations developed the AD-specific markers in vitro, yet they also uncover tissue patterning defects and altered development. These findings are complemented by single-cell sequencing data confirming this observation and uncovering that neurons in AD-COs likely differentiate prematurely.
During the past two decades, induced pluripotent stem cells (iPSCs) have been widely used to study human neural development and disease. Especially in the field of Alzheimer’s disease (AD), remarkable effort has been put into investigating molecular mechanisms behind this disease. Then, with the advent of 3D neuronal cultures and cerebral organoids (COs), several studies have demonstrated that this model can adequately mimic familial and sporadic AD. Therefore, we created an AD-CO model using iPSCs derived from patients with familial AD forms and explored early events and the progression of AD pathogenesis. Our study demonstrated that COs derived from three AD-iPSC lines with PSEN1(A246E) or PSEN2(N141I) mutations developed the AD-specific markers in vitro, yet they also uncover tissue patterning defects and altered development. These findings are complemented by single-cell sequencing data confirming this observation and uncovering that neurons in AD-COs likely differentiate prematurely. [Display omitted] •Cerebral organoids generated from patients with fAD forms develop AD-like pathology•AD organoids react to β- and γ-secretase inhibitors by decreasing levels of Aβ peptides•AD organoids show developmental and tissue patterning defects•Single-cell-seq data support altered development and the signs of premature differentiation Vanova et al. show that brain organoids differentiated from induced pluripotent stem cells with mutations in PSEN1 and PSEN2 genes mimic the development of Alzheimer’s disease-like pathology in vitro. Curiously, these brain organoids also exhibit developmental and tissue patterning defects, supported by mRNA single-cell sequencing data showing premature neuronal differentiation.
ArticleNumber 113310
Author Fedorova, Veronika
Fojtik, Petr
Klimova, Hana
Bartova, Simona
Amruz Cerna, Katerina
Capandova, Michaela
Bohaciakova, Dasa
Taus, Petr
Orviska, Petra
Nezvedova, Marketa
Hribkova, Hana
Raska, Jan
Vanova, Tereza
Pospisilova, Veronika
Kadakova, Sona
Spacil, Zdenek
Plevova, Karla
Sedmik, Jiri
Author_xml – sequence: 1
  givenname: Tereza
  surname: Vanova
  fullname: Vanova, Tereza
  organization: Department of Histology and Embryology, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic
– sequence: 2
  givenname: Jiri
  surname: Sedmik
  fullname: Sedmik, Jiri
  organization: Department of Histology and Embryology, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic
– sequence: 3
  givenname: Jan
  surname: Raska
  fullname: Raska, Jan
  organization: Department of Histology and Embryology, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic
– sequence: 4
  givenname: Katerina
  surname: Amruz Cerna
  fullname: Amruz Cerna, Katerina
  organization: Department of Histology and Embryology, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic
– sequence: 5
  givenname: Petr
  surname: Taus
  fullname: Taus, Petr
  organization: Central European Institute of Technology, Masaryk University, 62500 Brno, Czech Republic
– sequence: 6
  givenname: Veronika
  surname: Pospisilova
  fullname: Pospisilova, Veronika
  organization: Department of Histology and Embryology, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic
– sequence: 7
  givenname: Marketa
  surname: Nezvedova
  fullname: Nezvedova, Marketa
  organization: RECETOX, Faculty of Science, Masaryk University, 62500 Brno, Czech Republic
– sequence: 8
  givenname: Veronika
  surname: Fedorova
  fullname: Fedorova, Veronika
  organization: Department of Histology and Embryology, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic
– sequence: 9
  givenname: Sona
  surname: Kadakova
  fullname: Kadakova, Sona
  organization: Department of Histology and Embryology, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic
– sequence: 10
  givenname: Hana
  surname: Klimova
  fullname: Klimova, Hana
  organization: Department of Histology and Embryology, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic
– sequence: 11
  givenname: Michaela
  surname: Capandova
  fullname: Capandova, Michaela
  organization: Department of Histology and Embryology, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic
– sequence: 12
  givenname: Petra
  surname: Orviska
  fullname: Orviska, Petra
  organization: Department of Histology and Embryology, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic
– sequence: 13
  givenname: Petr
  surname: Fojtik
  fullname: Fojtik, Petr
  organization: Department of Histology and Embryology, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic
– sequence: 14
  givenname: Simona
  surname: Bartova
  fullname: Bartova, Simona
  organization: Department of Histology and Embryology, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic
– sequence: 15
  givenname: Karla
  surname: Plevova
  fullname: Plevova, Karla
  organization: Central European Institute of Technology, Masaryk University, 62500 Brno, Czech Republic
– sequence: 16
  givenname: Zdenek
  surname: Spacil
  fullname: Spacil, Zdenek
  organization: RECETOX, Faculty of Science, Masaryk University, 62500 Brno, Czech Republic
– sequence: 17
  givenname: Hana
  surname: Hribkova
  fullname: Hribkova, Hana
  organization: Department of Histology and Embryology, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic
– sequence: 18
  givenname: Dasa
  orcidid: 0000-0002-9538-6668
  surname: Bohaciakova
  fullname: Bohaciakova, Dasa
  email: bohaciakova@med.muni.cz
  organization: Department of Histology and Embryology, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic
BackLink https://www.ncbi.nlm.nih.gov/pubmed/37864790$$D View this record in MEDLINE/PubMed
BookMark eNqNkstu1DAUhiNUREvpGyDkJZuZ-pZkzAKpGhWoVAESsLZ8Oel45MTBdqZqV7wDK16PJ8FDSoVYAN749v_fOfLvx9XBEAaoqqcELwkmzel2acBHGJcUU7YkhDGCH1RHlBKyIJS3B7-tD6uTlLa4jAYTIvij6pC1q4a3Ah9VX9cQQUflUYhXagjOJmQhuh1Y1MXQo1FlB0NO6NrlDTrztxtwPcTvX74VoUugEsxX7z-cvyWnFPVTLpYwJLRROyiwDkwuPJRdShPsgRni4IYrpAaLlC-7UszCDnwY-1LrSfWwUz7Byd18XH16df5x_WZx-e71xfrscmF4y_OCAXBNjCArZnGjhGCaadxwoLoVpCacKkw17hRvOk1s3RlrBDbQcc4Vsx07ri5mrg1qK8foehVvZFBO_jwoDyJVzM54kA0jHdSA65UAXmuheQ20bTjlquWMQGHVM2saRnVzrby_BxIs95nJrZwzk_vM5JxZ8T2ffWMMnydIWfYuFZ1XA4QpSbpaYSxa0bRF-uxOOuke7D3_V5hF8GIWmBhSitBJ4-YsclTO_6sR_of5P_t_OdugBLVzEGUy5b8YsC6W3MtLur8DfgDtkeEZ
CitedBy_id crossref_primary_10_3389_fnmol_2024_1414886
crossref_primary_10_3390_biomedicines12061193
crossref_primary_10_1038_s41514_024_00161_5
crossref_primary_10_3389_fncel_2024_1406970
crossref_primary_10_61958_NDYM9750
crossref_primary_10_1038_s41419_024_06606_9
crossref_primary_10_3389_fnagi_2024_1406160
crossref_primary_10_1038_s41586_024_08172_8
crossref_primary_10_34133_bmef_0065
crossref_primary_10_1016_j_copbio_2024_103253
crossref_primary_10_1186_s13287_024_03732_1
crossref_primary_10_23838_pfm_2024_00086
crossref_primary_10_3390_ijms25179747
Cites_doi 10.1242/dev.128.11.2019
10.1038/nrn3618
10.1038/sj.emboj.7601398
10.1016/j.stem.2023.01.002
10.1038/s41590-018-0276-y
10.1038/nmeth.2089
10.1093/bioinformatics/btab003
10.3233/JAD-170830
10.1038/s41380-018-0036-2
10.1016/j.aca.2017.01.059
10.1016/j.ajpath.2012.02.012
10.1016/j.cell.2015.12.056
10.1002/stem.3272
10.1080/00401706.1969.10490657
10.1111/jnc.15713
10.1126/sciadv.aba5933
10.1016/j.neuron.2017.02.001
10.1101/gad.1302105
10.1038/nature12517
10.21769/BioProtoc.3985
10.1001/jamaneurol.2015.3037
10.1007/s12015-021-10254-3
10.1007/s007260170015
10.1001/jamaneurol.2015.1099
10.1371/journal.pone.0161969
10.1016/j.neuron.2016.05.018
10.1073/pnas.86.20.8045
10.1186/s13195-020-00732-0
10.1016/j.brainres.2019.146561
10.1126/science.abl5163
10.1038/nprot.2015.085
10.1126/science.7638622
10.1021/acs.analchem.2c00981
10.1002/cpcb.51
10.1186/s13059-020-02147-4
10.1016/j.neuron.2010.09.030
10.1111/j.1750-3639.1993.tb00725.x
10.1016/B978-0-12-819973-2.00013-7
10.1038/376775a0
10.1186/s40478-017-0475-z
10.2174/1570159X13666150716165726
10.1016/j.scr.2019.101563
10.1038/s41586-019-1654-9
10.1016/j.stemcr.2023.05.018
10.1371/journal.pone.0102995
10.1242/dev.079590
10.1186/s40478-020-01091-5
10.1002/1878-0261.13389
10.1038/s41598-017-02456-y
10.1242/bio.058727
10.1038/nbt.4096
10.1016/S0306-4522(00)00516-9
10.1007/BF02769179
10.1371/journal.pone.0045069
10.7554/eLife.50333
10.1016/j.celrep.2019.01.023
10.1186/1750-1326-9-3
10.1038/nrm.2015.27
10.1038/s41587-020-0591-3
10.1016/S0304-3940(97)00223-1
10.18632/oncotarget.13776
10.1089/scd.2017.0058
10.1038/s41467-020-20440-5
10.1016/j.stem.2021.04.004
10.1073/pnas.88.17.7552
10.1016/j.cellsig.2015.10.006
10.1038/nprot.2014.158
10.1006/exnr.1998.7010
10.1038/375754a0
10.1016/S0006-8993(96)00811-6
10.1111/jnc.12675
10.1016/j.neuron.2018.05.008
10.1016/j.jalz.2019.09.002
10.1016/j.neuron.2019.07.010
10.1002/dvdy.20463
10.1016/0306-4522(94)90310-7
10.1093/gigascience/giaa151
10.1016/j.cell.2015.07.001
10.1186/s13024-018-0265-5
10.1038/s41592-021-01346-6
10.1007/BF00294352
10.3390/ijms21093158
10.1038/nbt.3519
10.1038/s41586-022-05279-8
10.1016/j.celrep.2020.108615
10.1186/s12864-018-4772-0
10.1038/s41467-020-19264-0
ContentType Journal Article
Copyright 2023 The Author(s)
Copyright © 2023 The Author(s). Published by Elsevier Inc. All rights reserved.
Copyright_xml – notice: 2023 The Author(s)
– notice: Copyright © 2023 The Author(s). Published by Elsevier Inc. All rights reserved.
DBID 6I.
AAFTH
AAYXX
CITATION
CGR
CUY
CVF
ECM
EIF
NPM
7X8
ADTOC
UNPAY
DOA
DOI 10.1016/j.celrep.2023.113310
DatabaseName ScienceDirect Open Access Titles
Elsevier:ScienceDirect:Open Access
CrossRef
Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
MEDLINE - Academic
Unpaywall for CDI: Periodical Content
Unpaywall
DOAJ Directory of Open Access Journals
DatabaseTitle CrossRef
MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
MEDLINE - Academic
DatabaseTitleList MEDLINE - Academic
MEDLINE


Database_xml – sequence: 1
  dbid: DOA
  name: DOAJ Directory of Open Access Journals
  url: https://www.doaj.org/
  sourceTypes: Open Website
– sequence: 2
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 3
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
– sequence: 4
  dbid: UNPAY
  name: Unpaywall
  url: https://proxy.k.utb.cz/login?url=https://unpaywall.org/
  sourceTypes: Open Access Repository
DeliveryMethod fulltext_linktorsrc
Discipline Biology
EISSN 2211-1247
ExternalDocumentID oai_doaj_org_article_631fe5e0589e45b9b45e276424a7431e
10.1016/j.celrep.2023.113310
37864790
10_1016_j_celrep_2023_113310
S2211124723013220
Genre Research Support, Non-U.S. Gov't
Journal Article
GroupedDBID 0R~
4.4
457
53G
5VS
6I.
AAEDT
AAEDW
AAFTH
AAIKJ
AAKRW
AALRI
AAMRU
AAXUO
AAYWO
ABMAC
ACGFO
ACGFS
ACVFH
ADBBV
ADCNI
ADEZE
ADVLN
AENEX
AEUPX
AEXQZ
AFPUW
AFTJW
AGHFR
AIGII
AITUG
AKBMS
AKRWK
AKYEP
ALMA_UNASSIGNED_HOLDINGS
AMRAJ
APXCP
BAWUL
BCNDV
DIK
EBS
EJD
FCP
FDB
FRP
GROUPED_DOAJ
GX1
IXB
KQ8
M41
M48
O-L
O9-
OK1
ROL
SSZ
AAYXX
CITATION
HZ~
IPNFZ
RIG
CGR
CUY
CVF
ECM
EIF
NPM
7X8
ADTOC
UNPAY
ID FETCH-LOGICAL-c474t-3ee4b1c9183d06a993b3b064e2b7915142a02b0fa46fb1d5fcdc90cef444a3df3
IEDL.DBID M48
ISSN 2211-1247
2639-1856
IngestDate Wed Aug 27 01:22:19 EDT 2025
Tue Aug 19 19:32:08 EDT 2025
Wed Oct 01 14:26:33 EDT 2025
Mon Jul 21 06:04:19 EDT 2025
Wed Oct 01 05:39:33 EDT 2025
Thu Apr 24 23:08:38 EDT 2025
Sat Aug 23 17:12:13 EDT 2025
IsDoiOpenAccess true
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 11
Keywords cerebral organoids
development
Alzheimer’s disease
CP: Neuroscience
induced pluripotent stem cells
single-cell mRNA sequencing
CP: Developmental biology
Language English
License This is an open access article under the CC BY-NC-ND license.
Copyright © 2023 The Author(s). Published by Elsevier Inc. All rights reserved.
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c474t-3ee4b1c9183d06a993b3b064e2b7915142a02b0fa46fb1d5fcdc90cef444a3df3
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
ORCID 0000-0002-9538-6668
OpenAccessLink https://www.sciencedirect.com/science/article/pii/S2211124723013220
PMID 37864790
PQID 2880097967
PQPubID 23479
ParticipantIDs doaj_primary_oai_doaj_org_article_631fe5e0589e45b9b45e276424a7431e
unpaywall_primary_10_1016_j_celrep_2023_113310
proquest_miscellaneous_2880097967
pubmed_primary_37864790
crossref_citationtrail_10_1016_j_celrep_2023_113310
crossref_primary_10_1016_j_celrep_2023_113310
elsevier_sciencedirect_doi_10_1016_j_celrep_2023_113310
ProviderPackageCode CITATION
AAYXX
PublicationCentury 2000
PublicationDate 2023-11-28
PublicationDateYYYYMMDD 2023-11-28
PublicationDate_xml – month: 11
  year: 2023
  text: 2023-11-28
  day: 28
PublicationDecade 2020
PublicationPlace United States
PublicationPlace_xml – name: United States
PublicationTitle Cell reports (Cambridge)
PublicationTitleAlternate Cell Rep
PublicationYear 2023
Publisher Elsevier Inc
Elsevier
Publisher_xml – name: Elsevier Inc
– name: Elsevier
References Miller, Policastro, Sriramkumar, Lai, Huntington, Ladaika, Zentner, O’Hagan (bib95) 2020
Quiroz, Schultz, Chen, Protas, Brickhouse, Fleisher, Langbaum, Thiyyagura, Fagan, Shah (bib61) 2015; 72
Bhat, Crowe, Bitto, Moh, Katsetos, Garcia, Johnson, Trojanowski, Sell, Torres (bib5) 2012; 7
Ghatak, Dolatabadi, Trudler, Zhang, Wu, Mohata, Ambasudhan, Talantova, Lipton (bib32) 2019; 8
Qin, Prins, Groeneveld, Van Westen, de Vries, Wong, Bischoff, de Lange (bib40) 2020; 21
Susaki, Tainaka, Perrin, Yukinaga, Kuno, Ueda (bib80) 2015; 10
He, Brazovskaja, Ebert, Camp, Treutlein (bib94) 2020; 21
Arendt (bib59) 2001; 102
Nezvedová, Jha, Váňová, Gadara, Klímová, Raška, Opálka, Bohačiaková, Spáčil (bib77) 2023; 95
Nakamura, Hasimoto, Kashiwagi, Miyamae, Shinosaki, Nishikawa, Hattori, Kudo, Takeda (bib42) 1997; 225
Bacioglu, Maia, Preische, Schelle, Apel, Kaeser, Schweighauser, Eninger, Lambert, Pilotto (bib39) 2016; 91
Salta, Lazarov, Fitzsimons, Tanzi, Lucassen, Choi (bib64) 2023; 30
De Strooper, Karran (bib6) 2016; 164
Lancaster, Renner, Martin, Wenzel, Bicknell, Hurles, Homfray, Penninger, Jackson, Knoblich (bib18) 2013; 501
Bajo, Yoo, Cairns, Gratzer, Lubec (bib52) 2001; 21
Ortiz-Virumbrales, Moreno, Kruglikov, Marazuela, Sproul, Jacob, Zimmer, Paull, Zhang, Schadt (bib55) 2017; 5
Ferreira-Vieira, Guimaraes, Silva, Ribeiro (bib3) 2016; 14
Alić, Goh, Murray, Portelius, Gkanatsiou, Gough, Mok, Koschut, Brunmeir, Yeap (bib34) 2020
Pollanen, Bergeron, Weyer (bib50) 1994; 88
Raja, Mungenast, Lin, Ko, Abdurrob, Seo, Tsai (bib12) 2016; 11
Fedorova, Pospisilova, Vanova, Amruz Cerna, Abaffy, Sedmik, Raska, Vochyanova, Matusova, Houserova (bib78) 2023; 17
Trojanowski, Schmidt, Shin, Bramblett, Rao, Lee (bib49) 1993; 3
Abate, Frisoni, Bourdon, Piccirella, Memo, Uberti (bib4) 2020; 12
Fleck, Jansen, Wollny, Zenk, Seimiya, Jain, Okamoto, Santel, He, Camp (bib67) 2023; 621
Arber, Lovejoy, Harris, Willumsen, Alatza, Casey, Lines, Kerins, Mueller, Zetterberg (bib11) 2021; 34
Sherrington, Rogaev, Liang, Rogaeva, Levesque, Ikeda, Chi, Lin, Li, Holman (bib14) 1995; 375
Mukherjee, Dubois, Perez, Varghese, Birchall, Leckey, Davydova, McLean, Nisbet, Roberts (bib38) 2023; 164
Xie, Wang, Lan, Wei, Ni, Chai, Liu, Hu, Li, Li (bib75) 2017; 7
Sivitilli, Ghiasi, Attisano (bib71) 2021; 11
Conte, Morcillo, Bovolenta (bib26) 2005; 234
Doering (bib48) 1993; 7
Barak, Fedorova, Pospisilova, Raska, Vochyanova, Sedmik, Hribkova, Klimova, Vanova, Bohaciakova (bib8) 2022; 18
Street, Risso, Fletcher, Das, Ngai, Yosef, Purdom, Dudoit (bib96) 2018; 19
Ninkovic, Pinto, Petricca, Lepier, Sun, Rieger, Schroeder, Cvekl, Favor, Götz (bib25) 2010; 68
Franzén, Gan, Björkegren (bib22) 2019
Duggan, McCarthy (bib69) 2016; 28
Lange, Bergen, Klein, Setty, Reuter, Bakhti, Lickert, Ansari, Schniering, Schiller (bib92) 2022; 19
Butler, Hoffman, Smibert, Papalexi, Satija (bib86) 2018; 36
Yang, Zhao, Ma, Shi, Song, Tang, Li, Li, Liu, Tang (bib30) 2017; 8
Caldwell, Liu, Schroth, Galasko, Yuan, Wagner, Subramaniam (bib66) 2020; 6
Rogaev, Sherrington, Rogaeva, Levesque, Ikeda, Liang, Chi, Lin, Holman, Tsuda (bib16) 1995; 376
Meyer, Feldman, Lu, Drake, Lim, Ling, Bishop, Pan, Seo, Lin (bib35) 2019; 26
Vidova, Stuchlikova, Vrbova, Almasi, Klanova, Thon, Spacil (bib83) 2019; 18
Grubbs (bib97) 1969; 11
Su, Cummings, Cotman (bib46) 1996; 739
Zetterberg, Skillbäck, Mattsson, Trojanowski, Portelius, Shaw, Weiner, Blennow (bib2) 2016; 73
Moreno, Della Guardia, Shnyder, Ortiz-Virumbrales, Kruglikov, Zhang, Schadt, Tanzi, Noggle, Buettner, Gandy (bib54) 2018; 13
Kwart, Gregg, Scheckel, Murphy, Paquet, Duffield, Fak, Olsen, Darnell, Tessier-Lavigne (bib74) 2019; 104
Chen, Rengarajan, Kjar, Huang (bib70) 2021; 6
Blischak, Carbonetto, Stephens (bib93) 2019
Hurley, Mozolewski, Dobrowolski, Hsieh (bib68) 2023; 18
Raska, Klimova, Sheardova, Fedorova, Hribkova, Pospisilova, Vochyanova, Vanova, Bohaciakova (bib73) 2021; 53
Raska, Hribkova, Klimova, Fedorova, Barak, Barta, Pospisilova, Vochyanova, Vanova, Bohaciakova (bib17) 2021; 53
Toda, Parylak, Linker, Gage (bib63) 2019; 24
Hernández, Rooney, Daniszewski, Gulluyan, Liang, Cook, Hewitt, Pébay (bib37) 2021
Dickson, King, McCormack, Vickers (bib41) 1999; 156
Cras, Kawai, Lowery, Gonzalez-DeWhitt, Greenberg, Perry (bib44) 1991; 88
Terreros-Roncal, Moreno-Jiménez, Flor-García, Rodríguez-Moreno, Trinchero, Cafini, Rábano, Llorens-Martín (bib62) 2021; 374
Shekari, Fahnestock (bib53) 2021
Anthony, Mason, Gridley, Fishell, Heintz (bib31) 2005; 19
Faravelli, Costamagna, Tamanini, Corti (bib13) 2020; 1727
Mertens, Herdy, Traxler, Schafer, Schlachetzki, Böhnke, Reid, Lee, Zangwill, Fernandes (bib65) 2021; 28
Bohaciakova, Renzova, Fedorova, Barak, Kunova Bosakova, Hampl, Cajanek (bib72) 2017; 26
Espuny-Camacho, Arranz, Fiers, Snellinx, Ando, Munck, Bonnefont, Lambot, Corthout, Omodho (bib51) 2017; 93
Fedorova, Vanova, Elrefae, Pospisil, Petrasova, Kolajova, Hudacova, Baniariova, Barak, Peskova (bib79) 2019; 40
Lancaster, Knoblich (bib76) 2014; 9
Pulina, Hopkins, Haroutunian, Greengard, Bustos (bib20) 2020; 16
Park, Jang, Lee, Lee, Kang, Chang, Kim, Han, Seo, Choi (bib36) 2021; 12
Lin, Seo, Gao, Feldman, Wen, Penney, Cam, Gjoneska, Raja, Cheng (bib9) 2018; 98
Adriaanse, Binnewijzend, Ossenkoppele, Tijms, van der Flier, Koene, Smits, Wink, Scheltens, van Berckel, Barkhof (bib60) 2014; 9
Kanton, Boyle, He, Santel, Weigert, Sanchís-Calleja, Guijarro, Sidow, Fleck, Han (bib28) 2019; 574
Schmidt, Lee, Trojanowski (bib45) 1991; 64
Zhao, Fu, Yamazaki, Ren, Davis, Liu, Lu, Wang, Chen, Cherukuri (bib10) 2020; 11
Liu, Lagutin, Mende, Streit, Oliver (bib24) 2006; 25
Alquicira-Hernandez, Powell (bib88) 2021; 37
Avior, Sagi, Benvenisty (bib7) 2016; 17
Fernandopulle, Prestil, Grunseich, Wang, Gan, Ward (bib21) 2018; 79
Martinez-Morales, Signore, Acampora, Simeone, Bovolenta (bib27) 2001; 128
Peskova, Jurcikova, Vanova, Krivanek, Capandova, Sramkova, Sebestikova, Kolouskova, Kotasova, Streit, Barta (bib82) 2020; 38
Aran, Looney, Liu, Wu, Fong, Hsu, Chak, Naikawadi, Wolters, Abate (bib89) 2019; 20
Bergen, Lange, Peidli, Wolf, Theis (bib91) 2020; 38
Young, Behjati (bib87) 2020; 9
Sucha, Kubickova, Cervenka, Hruska-Plochan, Bohaciakova, Vodickova Kepkova, Novakova, Budkova, Susor, Marsala (bib84) 2021; 10
Gonzales, Liang, Lim, Chan, Yeo, Tan, Gao, Le, Tan, Low (bib33) 2015; 162
Vidova, Spacil (bib85) 2017; 964
Vickers, Riederer, Marugg, Buée-Scherrer, Buée, Delacourte, Morrison (bib43) 1994; 62
Wezyk, Szybinska, Wojsiat, Szczerba, Day, Ronnholm, Kele, Berdynski, Peplonska, Fichna (bib57) 2018; 62
Röhr, Boon, Schuler, Kremer, Hoozemans, Bouwman, El-Mashtoly, Nabers, Großerueschkamp, Rozemuller, Gerwert (bib19) 2020; 8
Kohwi, Doe (bib58) 2013; 14
Sasai, Eiraku, Suga (bib23) 2012; 139
Bray, Pimentel, Melsted, Pachter (bib90) 2016; 34
Schneider, Rasband, Eliceiri (bib81) 2012; 9
Dawkins, Small (bib1) 2014; 129
Duan, Bhattacharyya, Belmadani, Pan, Miller, Kessler (bib56) 2014; 9
Koch, Tamboli, Mertens, Wunderlich, Ladewig, Stüber, Esselmann, Wiltfang, Brüstle, Walter (bib29) 2012; 180
Zhang, Sternberger, Rubinstein, Herman, Binder, Sternberger (bib47) 1989; 86
Levy-Lahad, Wasco, Poorkaj, Romano, Oshima, Pettingell, Yu, Jondro, Schmidt, Wang (bib15) 1995; 269
Mertens (10.1016/j.celrep.2023.113310_bib65) 2021; 28
Raska (10.1016/j.celrep.2023.113310_bib73) 2021; 53
Toda (10.1016/j.celrep.2023.113310_bib63) 2019; 24
Lancaster (10.1016/j.celrep.2023.113310_bib76) 2014; 9
Abate (10.1016/j.celrep.2023.113310_bib4) 2020; 12
Street (10.1016/j.celrep.2023.113310_bib96) 2018; 19
Liu (10.1016/j.celrep.2023.113310_bib24) 2006; 25
Espuny-Camacho (10.1016/j.celrep.2023.113310_bib51) 2017; 93
Bacioglu (10.1016/j.celrep.2023.113310_bib39) 2016; 91
Nezvedová (10.1016/j.celrep.2023.113310_bib77) 2023; 95
Qin (10.1016/j.celrep.2023.113310_bib40) 2020; 21
Duan (10.1016/j.celrep.2023.113310_bib56) 2014; 9
Arber (10.1016/j.celrep.2023.113310_bib11) 2021; 34
Aran (10.1016/j.celrep.2023.113310_bib89) 2019; 20
Anthony (10.1016/j.celrep.2023.113310_bib31) 2005; 19
Zhao (10.1016/j.celrep.2023.113310_bib10) 2020; 11
Trojanowski (10.1016/j.celrep.2023.113310_bib49) 1993; 3
Moreno (10.1016/j.celrep.2023.113310_bib54) 2018; 13
Shekari (10.1016/j.celrep.2023.113310_bib53) 2021
Vickers (10.1016/j.celrep.2023.113310_bib43) 1994; 62
Kanton (10.1016/j.celrep.2023.113310_bib28) 2019; 574
Arendt (10.1016/j.celrep.2023.113310_bib59) 2001; 102
Hurley (10.1016/j.celrep.2023.113310_bib68) 2023; 18
De Strooper (10.1016/j.celrep.2023.113310_bib6) 2016; 164
Conte (10.1016/j.celrep.2023.113310_bib26) 2005; 234
Su (10.1016/j.celrep.2023.113310_bib46) 1996; 739
Ferreira-Vieira (10.1016/j.celrep.2023.113310_bib3) 2016; 14
Rogaev (10.1016/j.celrep.2023.113310_bib16) 1995; 376
Park (10.1016/j.celrep.2023.113310_bib36) 2021; 12
Vidova (10.1016/j.celrep.2023.113310_bib83) 2019; 18
Nakamura (10.1016/j.celrep.2023.113310_bib42) 1997; 225
Doering (10.1016/j.celrep.2023.113310_bib48) 1993; 7
Hernández (10.1016/j.celrep.2023.113310_bib37) 2021
Faravelli (10.1016/j.celrep.2023.113310_bib13) 2020; 1727
Mukherjee (10.1016/j.celrep.2023.113310_bib38) 2023; 164
Alquicira-Hernandez (10.1016/j.celrep.2023.113310_bib88) 2021; 37
Bohaciakova (10.1016/j.celrep.2023.113310_bib72) 2017; 26
Bhat (10.1016/j.celrep.2023.113310_bib5) 2012; 7
Sucha (10.1016/j.celrep.2023.113310_bib84) 2021; 10
Ortiz-Virumbrales (10.1016/j.celrep.2023.113310_bib55) 2017; 5
Sivitilli (10.1016/j.celrep.2023.113310_bib71) 2021; 11
Miller (10.1016/j.celrep.2023.113310_bib95) 2020
Martinez-Morales (10.1016/j.celrep.2023.113310_bib27) 2001; 128
Blischak (10.1016/j.celrep.2023.113310_bib93) 2019
Schneider (10.1016/j.celrep.2023.113310_bib81) 2012; 9
Sherrington (10.1016/j.celrep.2023.113310_bib14) 1995; 375
Fedorova (10.1016/j.celrep.2023.113310_bib78) 2023; 17
Butler (10.1016/j.celrep.2023.113310_bib86) 2018; 36
Terreros-Roncal (10.1016/j.celrep.2023.113310_bib62) 2021; 374
Fedorova (10.1016/j.celrep.2023.113310_bib79) 2019; 40
Pulina (10.1016/j.celrep.2023.113310_bib20) 2020; 16
Bajo (10.1016/j.celrep.2023.113310_bib52) 2001; 21
Cras (10.1016/j.celrep.2023.113310_bib44) 1991; 88
Salta (10.1016/j.celrep.2023.113310_bib64) 2023; 30
Kwart (10.1016/j.celrep.2023.113310_bib74) 2019; 104
Levy-Lahad (10.1016/j.celrep.2023.113310_bib15) 1995; 269
Avior (10.1016/j.celrep.2023.113310_bib7) 2016; 17
Fernandopulle (10.1016/j.celrep.2023.113310_bib21) 2018; 79
Caldwell (10.1016/j.celrep.2023.113310_bib66) 2020; 6
Fleck (10.1016/j.celrep.2023.113310_bib67) 2023; 621
Pollanen (10.1016/j.celrep.2023.113310_bib50) 1994; 88
Chen (10.1016/j.celrep.2023.113310_bib70) 2021; 6
Zhang (10.1016/j.celrep.2023.113310_bib47) 1989; 86
Lancaster (10.1016/j.celrep.2023.113310_bib18) 2013; 501
Lin (10.1016/j.celrep.2023.113310_bib9) 2018; 98
Adriaanse (10.1016/j.celrep.2023.113310_bib60) 2014; 9
Zetterberg (10.1016/j.celrep.2023.113310_bib2) 2016; 73
Ghatak (10.1016/j.celrep.2023.113310_bib32) 2019; 8
He (10.1016/j.celrep.2023.113310_bib94) 2020; 21
Peskova (10.1016/j.celrep.2023.113310_bib82) 2020; 38
Bergen (10.1016/j.celrep.2023.113310_bib91) 2020; 38
Yang (10.1016/j.celrep.2023.113310_bib30) 2017; 8
Quiroz (10.1016/j.celrep.2023.113310_bib61) 2015; 72
Alić (10.1016/j.celrep.2023.113310_bib34) 2020
Xie (10.1016/j.celrep.2023.113310_bib75) 2017; 7
Grubbs (10.1016/j.celrep.2023.113310_bib97) 1969; 11
Bray (10.1016/j.celrep.2023.113310_bib90) 2016; 34
Koch (10.1016/j.celrep.2023.113310_bib29) 2012; 180
Young (10.1016/j.celrep.2023.113310_bib87) 2020; 9
Dawkins (10.1016/j.celrep.2023.113310_bib1) 2014; 129
Raja (10.1016/j.celrep.2023.113310_bib12) 2016; 11
Dickson (10.1016/j.celrep.2023.113310_bib41) 1999; 156
Gonzales (10.1016/j.celrep.2023.113310_bib33) 2015; 162
Sasai (10.1016/j.celrep.2023.113310_bib23) 2012; 139
Lange (10.1016/j.celrep.2023.113310_bib92) 2022; 19
Ninkovic (10.1016/j.celrep.2023.113310_bib25) 2010; 68
Meyer (10.1016/j.celrep.2023.113310_bib35) 2019; 26
Barak (10.1016/j.celrep.2023.113310_bib8) 2022; 18
Schmidt (10.1016/j.celrep.2023.113310_bib45) 1991; 64
Kohwi (10.1016/j.celrep.2023.113310_bib58) 2013; 14
Röhr (10.1016/j.celrep.2023.113310_bib19) 2020; 8
Franzén (10.1016/j.celrep.2023.113310_bib22) 2019
Wezyk (10.1016/j.celrep.2023.113310_bib57) 2018; 62
Susaki (10.1016/j.celrep.2023.113310_bib80) 2015; 10
Raska (10.1016/j.celrep.2023.113310_bib17) 2021; 53
Duggan (10.1016/j.celrep.2023.113310_bib69) 2016; 28
Vidova (10.1016/j.celrep.2023.113310_bib85) 2017; 964
References_xml – volume: 30
  start-page: 120
  year: 2023
  end-page: 136
  ident: bib64
  article-title: Adult hippocampal neurogenesis in Alzheimer’s disease: A roadmap to clinical relevance
  publication-title: Cell Stem Cell
– year: 2020
  ident: bib95
  article-title: LSD1 Promotes Secretory Cell Specification to Drive BRAF Mutant Colorectal Cancer
– volume: 7
  start-page: 2320
  year: 2017
  ident: bib75
  article-title: An episomal vector-based CRISPR/Cas9 system for highly efficient gene knockout in human pluripotent stem cells
  publication-title: Sci. Rep.
– volume: 621
  start-page: 365
  year: 2023
  end-page: 372
  ident: bib67
  article-title: Inferring and perturbing cell fate regulomes in human brain organoids
  publication-title: Nature
– volume: 128
  start-page: 2019
  year: 2001
  end-page: 2030
  ident: bib27
  article-title: Otx genes are required for tissue specification in the developing eye
  publication-title: Development
– volume: 375
  start-page: 754
  year: 1995
  end-page: 760
  ident: bib14
  article-title: Cloning of a gene bearing missense mutations in early-onset familial Alzheimer’s disease
  publication-title: Nature
– volume: 5
  start-page: 77
  year: 2017
  ident: bib55
  article-title: CRISPR/Cas9-Correctable mutation-related molecular and physiological phenotypes in iPSC-derived Alzheimer’s PSEN2N141Ineurons
  publication-title: Acta Neuropathol. Commun.
– volume: 11
  start-page: e3985
  year: 2021
  ident: bib71
  article-title: Production of Phenotypically Uniform Human Cerebral Organoids from Pluripotent Stem Cells
  publication-title: Bio. Protoc.
– year: 2021
  ident: bib37
  article-title: Culture Variabilities of Human iPSC-Derived Cerebral Organoids Are a Major Issue for the Modelling of Phenotypes Observed in Alzheimer’s Disease
  publication-title: Stem Cell Rev and Rep
– volume: 104
  start-page: 256
  year: 2019
  end-page: 270.e5
  ident: bib74
  article-title: A Large Panel of Isogenic APP and PSEN1 Mutant Human iPSC Neurons Reveals Shared Endosomal Abnormalities Mediated by APP β-CTFs, Not Aβ
  publication-title: Neuron
– volume: 9
  start-page: 2329
  year: 2014
  end-page: 2340
  ident: bib76
  article-title: Generation of cerebral organoids from human pluripotent stem cells
  publication-title: Nat. Protoc.
– volume: 156
  start-page: 100
  year: 1999
  end-page: 110
  ident: bib41
  article-title: Neurochemical diversity of dystrophic neurites in the early and late stages of Alzheimer’s disease
  publication-title: Exp. Neurol.
– volume: 62
  start-page: 175
  year: 2018
  end-page: 202
  ident: bib57
  article-title: Overactive BRCA1 Affects Presenilin 1 in Induced Pluripotent Stem Cell-Derived Neurons in Alzheimer’s Disease
  publication-title: J. Alzheimers Dis.
– volume: 139
  start-page: 4111
  year: 2012
  end-page: 4121
  ident: bib23
  article-title: In vitro organogenesis in three dimensions: self-organising stem cells
  publication-title: Development
– volume: 102
  start-page: 723
  year: 2001
  end-page: 765
  ident: bib59
  article-title: Alzheimer’s disease as a disorder of mechanisms underlying structural brain self-organization
  publication-title: Neuroscience
– volume: 11
  year: 2016
  ident: bib12
  article-title: Self-Organizing 3D Human Neural Tissue Derived from Induced Pluripotent Stem Cells Recapitulate Alzheimer’s Disease Phenotypes
  publication-title: PLoS One
– volume: 19
  start-page: 1028
  year: 2005
  end-page: 1033
  ident: bib31
  article-title: Brain lipid-binding protein is a direct target of Notch signaling in radial glial cells
  publication-title: Genes Dev.
– volume: 28
  start-page: 1
  year: 2016
  end-page: 11
  ident: bib69
  article-title: Beyond gamma-secretase activity: The multifunctional nature of presenilins in cell signalling pathways
  publication-title: Cell. Signal.
– volume: 21
  start-page: 224
  year: 2020
  ident: bib94
  article-title: CSS: cluster similarity spectrum integration of single-cell genomics data
  publication-title: Genome Biol.
– volume: 225
  start-page: 201
  year: 1997
  end-page: 204
  ident: bib42
  article-title: Abnormal distribution of neurofilament L in neurons with Alzheimer’s disease
  publication-title: Neurosci. Lett.
– volume: 18
  start-page: 1516
  year: 2023
  end-page: 1533
  ident: bib68
  article-title: Familial Alzheimer’s disease-associated PSEN1 mutations affect neurodevelopment through increased Notch signaling
  publication-title: Stem Cell Rep.
– volume: 34
  year: 2021
  ident: bib11
  article-title: Familial Alzheimer’s Disease Mutations in PSEN1 Lead to Premature Human Stem Cell Neurogenesis
  publication-title: Cell Rep.
– volume: 12
  start-page: 280
  year: 2021
  ident: bib36
  article-title: A logical network-based drug-screening platform for Alzheimer’s disease representing pathological features of human brain organoids
  publication-title: Nat. Commun.
– volume: 64
  start-page: 352
  year: 1991
  end-page: 357
  ident: bib45
  article-title: Comparative epitope analysis of neuronal cytoskeletal proteins in Alzheimer’s disease senile plaque neurites and neuropil threads
  publication-title: Lab. Invest.
– volume: 18
  start-page: 792
  year: 2022
  end-page: 820
  ident: bib8
  article-title: Human iPSC-Derived Neural Models for Studying Alzheimer’s Disease: from Neural Stem Cells to Cerebral Organoids
  publication-title: Stem Cell Rev. Rep.
– volume: 739
  start-page: 79
  year: 1996
  end-page: 87
  ident: bib46
  article-title: Plaque biogenesis in brain aging and Alzheimer’s disease. I. Progressive changes in phosphorylation states of paired helical filaments and neurofilaments
  publication-title: Brain Res.
– volume: 3
  start-page: 45
  year: 1993
  end-page: 54
  ident: bib49
  article-title: Altered tau and neurofilament proteins in neuro-degenerative diseases: diagnostic implications for Alzheimer’s disease and Lewy body dementias
  publication-title: Brain Pathol.
– volume: 8
  start-page: 7900
  year: 2017
  end-page: 7913
  ident: bib30
  article-title: Early pathogenic event of Alzheimer’s disease documented in iPSCs from patients with PSEN1 mutations
  publication-title: Oncotarget
– volume: 62
  start-page: 1
  year: 1994
  end-page: 13
  ident: bib43
  article-title: Alterations in neurofilament protein immunoreactivity in human hippocampal neurons related to normal aging and Alzheimer’s disease
  publication-title: Neuroscience
– volume: 11
  start-page: 1
  year: 1969
  end-page: 21
  ident: bib97
  article-title: Procedures for Detecting Outlying Observations in Samples
  publication-title: Technometrics
– volume: 964
  start-page: 7
  year: 2017
  end-page: 23
  ident: bib85
  article-title: A review on mass spectrometry-based quantitative proteomics: Targeted and data independent acquisition
  publication-title: Anal. Chim. Acta
– volume: 9
  year: 2020
  ident: bib87
  article-title: SoupX removes ambient RNA contamination from droplet-based single-cell RNA sequencing data
  publication-title: GigaScience
– volume: 164
  start-page: 603
  year: 2016
  end-page: 615
  ident: bib6
  article-title: The Cellular Phase of Alzheimer’s Disease
  publication-title: Cell
– volume: 12
  start-page: 160
  year: 2020
  ident: bib4
  article-title: The pleiotropic role of p53 in functional/dysfunctional neurons: focus on pathogenesis and diagnosis of Alzheimer’s disease
  publication-title: Alzheimer's Res. Ther.
– volume: 9
  start-page: 671
  year: 2012
  end-page: 675
  ident: bib81
  article-title: NIH Image to ImageJ: 25 years of image analysis
  publication-title: Nat. Methods
– volume: 95
  start-page: 3160
  year: 2023
  end-page: 3167
  ident: bib77
  article-title: Single Cerebral Organoid Mass Spectrometry of Cell-Specific Protein and Glycosphingolipid Traits
  publication-title: Anal. Chem.
– volume: 11
  start-page: 5540
  year: 2020
  ident: bib10
  article-title: APOE4 exacerbates synapse loss and neurodegeneration in Alzheimer’s disease patient iPSC-derived cerebral organoids
  publication-title: Nat. Commun.
– volume: 91
  start-page: 56
  year: 2016
  end-page: 66
  ident: bib39
  article-title: Neurofilament Light Chain in Blood and CSF as Marker of Disease Progression in Mouse Models and in Neurodegenerative Diseases
  publication-title: Neuron
– volume: 25
  start-page: 5383
  year: 2006
  end-page: 5395
  ident: bib24
  article-title: Six3 activation of Pax6 expression is essential for mammalian lens induction and specification
  publication-title: EMBO J.
– volume: 88
  start-page: 1
  year: 1994
  end-page: 6
  ident: bib50
  article-title: Characterization of a shared epitope in cortical Lewy body fibrils and Alzheimer paired helical filaments
  publication-title: Acta Neuropathol.
– volume: 6
  start-page: 1130
  year: 2021
  end-page: 1139
  ident: bib70
  article-title: A matrigel-free method to generate matured human cerebral organoids using 3D-Printed microwell arrays
  publication-title: Bioact. Mater.
– volume: 53
  year: 2021
  ident: bib73
  article-title: Generation of three human iPSC lines from patients with a spontaneous late-onset Alzheimer’s disease and three sex- and age-matched healthy controls
  publication-title: Stem Cell Res.
– volume: 1727
  year: 2020
  ident: bib13
  article-title: Back to the origins: Human brain organoids to investigate neurodegeneration
  publication-title: Brain Res.
– volume: 10
  year: 2021
  ident: bib84
  article-title: Targeted mass spectrometry for monitoring of neural differentiation
  publication-title: Biol. Open
– volume: 501
  start-page: 373
  year: 2013
  end-page: 379
  ident: bib18
  article-title: Cerebral organoids model human brain development and microcephaly
  publication-title: Nature
– volume: 8
  year: 2019
  ident: bib32
  article-title: Mechanisms of hyperexcitability in Alzheimer’s disease hiPSC-derived neurons and cerebral organoids vs isogenic controls
  publication-title: Elife
– volume: 180
  start-page: 2404
  year: 2012
  end-page: 2416
  ident: bib29
  article-title: Presenilin-1 L166P Mutant Human Pluripotent Stem Cell–Derived Neurons Exhibit Partial Loss of γ-Secretase Activity in Endogenous Amyloid-β Generation
  publication-title: Am. J. Pathol.
– volume: 374
  start-page: 1106
  year: 2021
  end-page: 1113
  ident: bib62
  article-title: Impact of neurodegenerative diseases on human adult hippocampal neurogenesis
  publication-title: Science
– volume: 9
  year: 2014
  ident: bib60
  article-title: Widespread Disruption of Functional Brain Organization in Early-Onset Alzheimer’s Disease
  publication-title: PLoS One
– volume: 73
  start-page: 60
  year: 2016
  end-page: 67
  ident: bib2
  article-title: Association of Cerebrospinal Fluid Neurofilament Light Concentration With Alzheimer Disease Progression
  publication-title: JAMA Neurol.
– volume: 376
  start-page: 775
  year: 1995
  end-page: 778
  ident: bib16
  article-title: Familial Alzheimer’s disease in kindreds with missense mutations in a gene on chromosome 1 related to the Alzheimer’s disease type 3 gene
  publication-title: Nature
– year: 2019
  ident: bib22
  article-title: PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data
  publication-title: Database 2019
– volume: 19
  start-page: 159
  year: 2022
  end-page: 170
  ident: bib92
  article-title: CellRank for directed single-cell fate mapping
  publication-title: Nat. Methods
– volume: 8
  start-page: 222
  year: 2020
  ident: bib19
  article-title: Label-free vibrational imaging of different Aβ plaque types in Alzheimer’s disease reveals sequential events in plaque development
  publication-title: Acta Neuropathol. Commun.
– volume: 574
  start-page: 418
  year: 2019
  end-page: 422
  ident: bib28
  article-title: Organoid single-cell genomic atlas uncovers human-specific features of brain development
  publication-title: Nature
– volume: 93
  start-page: 1066
  year: 2017
  end-page: 1081.e8
  ident: bib51
  article-title: Hallmarks of Alzheimer’s Disease in Stem-Cell-Derived Human Neurons Transplanted into Mouse Brain
  publication-title: Neuron
– volume: 17
  start-page: 647
  year: 2023
  end-page: 663
  ident: bib78
  article-title: Glioblastoma and cerebral organoids: development and analysis of an in vitro model for glioblastoma migration
  publication-title: Mol. Oncol.
– volume: 36
  start-page: 411
  year: 2018
  end-page: 420
  ident: bib86
  article-title: Integrating single-cell transcriptomic data across different conditions, technologies, and species
  publication-title: Nat. Biotechnol.
– volume: 34
  start-page: 525
  year: 2016
  end-page: 527
  ident: bib90
  article-title: Near-optimal probabilistic RNA-seq quantification
  publication-title: Nat. Biotechnol.
– volume: 7
  start-page: e45069
  year: 2012
  ident: bib5
  article-title: Astrocyte Senescence as a Component of Alzheimer’s Disease
  publication-title: PLoS One
– volume: 20
  start-page: 163
  year: 2019
  end-page: 172
  ident: bib89
  article-title: Reference-based analysis of lung single-cell sequencing reveals a transitional profibrotic macrophage
  publication-title: Nat. Immunol.
– volume: 37
  start-page: 2485
  year: 2021
  end-page: 2487
  ident: bib88
  article-title: Nebulosa recovers single-cell gene expression signals by kernel density estimation
  publication-title: Bioinformatics
– volume: 38
  start-page: 1408
  year: 2020
  end-page: 1414
  ident: bib91
  article-title: Generalizing RNA velocity to transient cell states through dynamical modeling
  publication-title: Nat. Biotechnol.
– year: 2019
  ident: bib93
  article-title: Creating and Sharing Reproducible Research Code the Workflowr Way
– volume: 68
  start-page: 682
  year: 2010
  end-page: 694
  ident: bib25
  article-title: The Transcription Factor Pax6 Regulates Survival of Dopaminergic Olfactory Bulb Neurons via Crystallin αA
  publication-title: Neuron
– volume: 9
  start-page: 3
  year: 2014
  ident: bib56
  article-title: Stem cell derived basal forebrain cholinergic neurons from Alzheimer’s disease patients are more susceptible to cell death
  publication-title: Mol. Neurodegener.
– start-page: 191
  year: 2021
  end-page: 209
  ident: bib53
  article-title: Chapter 13 - Cholinergic neurodegeneration in Alzheimer disease mouse models
  publication-title: Handbook of Clinical Neurology the Human Hypothalamus: Neuropsychiatric Disorders
– volume: 6
  start-page: eaba5933
  year: 2020
  ident: bib66
  article-title: Dedifferentiation and neuronal repression define familial Alzheimer’s disease
  publication-title: Sci. Adv.
– volume: 234
  start-page: 718
  year: 2005
  end-page: 725
  ident: bib26
  article-title: Comparative analysis of Six3 and Six6 distribution in the developing and adult mouse brain
  publication-title: Dev. Dynam.
– volume: 269
  start-page: 973
  year: 1995
  end-page: 977
  ident: bib15
  article-title: Candidate gene for the chromosome 1 familial Alzheimer’s disease locus
  publication-title: Science
– volume: 162
  start-page: 564
  year: 2015
  end-page: 579
  ident: bib33
  article-title: Deterministic Restriction on Pluripotent State Dissolution by Cell-Cycle Pathways
  publication-title: Cell
– volume: 16
  start-page: 273
  year: 2020
  end-page: 282
  ident: bib20
  article-title: C99 selectively accumulates in vulnerable neurons in Alzheimer’s disease
  publication-title: Alzheimers Dement.
– volume: 13
  start-page: 33
  year: 2018
  ident: bib54
  article-title: iPSC-derived familial Alzheimer’s PSEN2N141I cholinergic neurons exhibit mutation-dependent molecular pathology corrected by insulin signaling
  publication-title: Mol. Neurodegener.
– volume: 21
  start-page: 3158
  year: 2020
  ident: bib40
  article-title: Utility of Animal Models to Understand Human Alzheimer’s Disease, Using the Mastermind Research Approach to Avoid Unnecessary Further Sacrifices of Animals
  publication-title: Int. J. Mol. Sci.
– volume: 86
  start-page: 8045
  year: 1989
  end-page: 8049
  ident: bib47
  article-title: Abnormal processing of multiple proteins in Alzheimer disease
  publication-title: Proc. Natl. Acad. Sci. USA
– volume: 21
  start-page: 293
  year: 2001
  end-page: 301
  ident: bib52
  article-title: Neurofilament proteins NF-L, NF-M and NF-H in brain of patients with Down syndrome and Alzheimer’s disease
  publication-title: Amino Acids
– volume: 88
  start-page: 7552
  year: 1991
  end-page: 7556
  ident: bib44
  article-title: Senile plaque neurites in Alzheimer disease accumulate amyloid precursor protein
  publication-title: Proc. Natl. Acad. Sci. USA
– volume: 79
  start-page: e51
  year: 2018
  ident: bib21
  article-title: Transcription Factor–Mediated Differentiation of Human iPSCs into Neurons
  publication-title: Curr. Protoc. Cell Biol.
– volume: 10
  start-page: 1709
  year: 2015
  end-page: 1727
  ident: bib80
  article-title: Advanced CUBIC protocols for whole-brain and whole-body clearing and imaging
  publication-title: Nat. Protoc.
– volume: 129
  start-page: 756
  year: 2014
  end-page: 769
  ident: bib1
  article-title: Insights into the physiological function of the β-amyloid precursor protein: beyond Alzheimer’s disease
  publication-title: J. Neurochem.
– volume: 72
  start-page: 912
  year: 2015
  end-page: 919
  ident: bib61
  article-title: Brain Imaging and Blood Biomarker Abnormalities in Children With Autosomal Dominant Alzheimer Disease: A Cross-Sectional Study
  publication-title: JAMA Neurol.
– volume: 164
  start-page: 529
  year: 2023
  end-page: 552
  ident: bib38
  article-title: Quantitative proteomics of tau and Aβ in detergent fractions from Alzheimer’s disease brains
  publication-title: J. Neurochem.
– volume: 98
  start-page: 1141
  year: 2018
  end-page: 1154.e7
  ident: bib9
  article-title: APOE4 Causes Widespread Molecular and Cellular Alterations Associated with Alzheimer’s Disease Phenotypes in Human iPSC-Derived Brain Cell Types
  publication-title: Neuron
– volume: 28
  start-page: 1533
  year: 2021
  end-page: 1548.e6
  ident: bib65
  article-title: Age-dependent instability of mature neuronal fate in induced neurons from Alzheimer’s patients
  publication-title: Cell Stem Cell
– volume: 14
  start-page: 823
  year: 2013
  end-page: 838
  ident: bib58
  article-title: Temporal fate specification and neural progenitor competence during development
  publication-title: Nat. Rev. Neurosci.
– volume: 17
  start-page: 170
  year: 2016
  end-page: 182
  ident: bib7
  article-title: Pluripotent stem cells in disease modelling and drug discovery
  publication-title: Nat. Rev. Mol. Cell Biol.
– volume: 19
  start-page: 477
  year: 2018
  ident: bib96
  article-title: Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics
  publication-title: BMC Genom.
– volume: 7
  start-page: 265
  year: 1993
  end-page: 291
  ident: bib48
  article-title: Probing modifications of the neuronal cytoskeleton
  publication-title: Mol. Neurobiol.
– volume: 26
  start-page: 1112
  year: 2019
  end-page: 1127.e9
  ident: bib35
  article-title: REST and Neural Gene Network Dysregulation in iPSC Models of Alzheimer’s Disease
  publication-title: Cell Rep.
– start-page: 1
  year: 2020
  end-page: 23
  ident: bib34
  article-title: Patient-specific Alzheimer-like pathology in trisomy 21 cerebral organoids reveals BACE2 as a gene dose-sensitive AD suppressor in human brain
  publication-title: Mol. Psychiatr.
– volume: 26
  start-page: 1521
  year: 2017
  end-page: 1527
  ident: bib72
  article-title: An Efficient Method for Generation of Knockout Human Embryonic Stem Cells Using CRISPR/Cas9 System
  publication-title: Stem Cell. Dev.
– volume: 40
  year: 2019
  ident: bib79
  article-title: Differentiation of neural rosettes from human pluripotent stem cells in vitro is sequentially regulated on a molecular level and accomplished by the mechanism reminiscent of secondary neurulation
  publication-title: Stem Cell Res.
– volume: 38
  start-page: 1557
  year: 2020
  end-page: 1567
  ident: bib82
  article-title: miR-183/96/182 cluster is an important morphogenetic factor targeting PAX6 expression in differentiating human retinal organoids
  publication-title: Stem Cell.
– volume: 24
  start-page: 67
  year: 2019
  end-page: 87
  ident: bib63
  article-title: The role of adult hippocampal neurogenesis in brain health and disease
  publication-title: Mol. Psychiatr.
– volume: 18
  start-page: 380
  year: 2019
  end-page: 391
  ident: bib83
  article-title: Multiplex Assay for Quantification of Acute Phase Proteins and Immunoglobulin A in Dried Blood Spots
  publication-title: J. Proteome Res.
– volume: 14
  start-page: 101
  year: 2016
  end-page: 115
  ident: bib3
  article-title: Alzheimer’s Disease: Targeting the Cholinergic System
  publication-title: Curr. Neuropharmacol.
– volume: 53
  year: 2021
  ident: bib17
  article-title: Generation of six human iPSC lines from patients with a familial Alzheimer’s disease (n = 3) and sex- and age-matched healthy controls (n = 3)
  publication-title: Stem Cell Res.
– volume: 128
  start-page: 2019
  year: 2001
  ident: 10.1016/j.celrep.2023.113310_bib27
  article-title: Otx genes are required for tissue specification in the developing eye
  publication-title: Development
  doi: 10.1242/dev.128.11.2019
– volume: 14
  start-page: 823
  year: 2013
  ident: 10.1016/j.celrep.2023.113310_bib58
  article-title: Temporal fate specification and neural progenitor competence during development
  publication-title: Nat. Rev. Neurosci.
  doi: 10.1038/nrn3618
– volume: 25
  start-page: 5383
  year: 2006
  ident: 10.1016/j.celrep.2023.113310_bib24
  article-title: Six3 activation of Pax6 expression is essential for mammalian lens induction and specification
  publication-title: EMBO J.
  doi: 10.1038/sj.emboj.7601398
– volume: 30
  start-page: 120
  year: 2023
  ident: 10.1016/j.celrep.2023.113310_bib64
  article-title: Adult hippocampal neurogenesis in Alzheimer’s disease: A roadmap to clinical relevance
  publication-title: Cell Stem Cell
  doi: 10.1016/j.stem.2023.01.002
– volume: 20
  start-page: 163
  year: 2019
  ident: 10.1016/j.celrep.2023.113310_bib89
  article-title: Reference-based analysis of lung single-cell sequencing reveals a transitional profibrotic macrophage
  publication-title: Nat. Immunol.
  doi: 10.1038/s41590-018-0276-y
– volume: 9
  start-page: 671
  year: 2012
  ident: 10.1016/j.celrep.2023.113310_bib81
  article-title: NIH Image to ImageJ: 25 years of image analysis
  publication-title: Nat. Methods
  doi: 10.1038/nmeth.2089
– volume: 37
  start-page: 2485
  year: 2021
  ident: 10.1016/j.celrep.2023.113310_bib88
  article-title: Nebulosa recovers single-cell gene expression signals by kernel density estimation
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btab003
– volume: 62
  start-page: 175
  year: 2018
  ident: 10.1016/j.celrep.2023.113310_bib57
  article-title: Overactive BRCA1 Affects Presenilin 1 in Induced Pluripotent Stem Cell-Derived Neurons in Alzheimer’s Disease
  publication-title: J. Alzheimers Dis.
  doi: 10.3233/JAD-170830
– volume: 24
  start-page: 67
  year: 2019
  ident: 10.1016/j.celrep.2023.113310_bib63
  article-title: The role of adult hippocampal neurogenesis in brain health and disease
  publication-title: Mol. Psychiatr.
  doi: 10.1038/s41380-018-0036-2
– volume: 964
  start-page: 7
  year: 2017
  ident: 10.1016/j.celrep.2023.113310_bib85
  article-title: A review on mass spectrometry-based quantitative proteomics: Targeted and data independent acquisition
  publication-title: Anal. Chim. Acta
  doi: 10.1016/j.aca.2017.01.059
– volume: 6
  start-page: 1130
  year: 2021
  ident: 10.1016/j.celrep.2023.113310_bib70
  article-title: A matrigel-free method to generate matured human cerebral organoids using 3D-Printed microwell arrays
  publication-title: Bioact. Mater.
– volume: 180
  start-page: 2404
  year: 2012
  ident: 10.1016/j.celrep.2023.113310_bib29
  article-title: Presenilin-1 L166P Mutant Human Pluripotent Stem Cell–Derived Neurons Exhibit Partial Loss of γ-Secretase Activity in Endogenous Amyloid-β Generation
  publication-title: Am. J. Pathol.
  doi: 10.1016/j.ajpath.2012.02.012
– volume: 164
  start-page: 603
  year: 2016
  ident: 10.1016/j.celrep.2023.113310_bib6
  article-title: The Cellular Phase of Alzheimer’s Disease
  publication-title: Cell
  doi: 10.1016/j.cell.2015.12.056
– volume: 38
  start-page: 1557
  year: 2020
  ident: 10.1016/j.celrep.2023.113310_bib82
  article-title: miR-183/96/182 cluster is an important morphogenetic factor targeting PAX6 expression in differentiating human retinal organoids
  publication-title: Stem Cell.
  doi: 10.1002/stem.3272
– volume: 11
  start-page: 1
  year: 1969
  ident: 10.1016/j.celrep.2023.113310_bib97
  article-title: Procedures for Detecting Outlying Observations in Samples
  publication-title: Technometrics
  doi: 10.1080/00401706.1969.10490657
– volume: 164
  start-page: 529
  year: 2023
  ident: 10.1016/j.celrep.2023.113310_bib38
  article-title: Quantitative proteomics of tau and Aβ in detergent fractions from Alzheimer’s disease brains
  publication-title: J. Neurochem.
  doi: 10.1111/jnc.15713
– volume: 6
  start-page: eaba5933
  year: 2020
  ident: 10.1016/j.celrep.2023.113310_bib66
  article-title: Dedifferentiation and neuronal repression define familial Alzheimer’s disease
  publication-title: Sci. Adv.
  doi: 10.1126/sciadv.aba5933
– volume: 93
  start-page: 1066
  year: 2017
  ident: 10.1016/j.celrep.2023.113310_bib51
  article-title: Hallmarks of Alzheimer’s Disease in Stem-Cell-Derived Human Neurons Transplanted into Mouse Brain
  publication-title: Neuron
  doi: 10.1016/j.neuron.2017.02.001
– volume: 19
  start-page: 1028
  year: 2005
  ident: 10.1016/j.celrep.2023.113310_bib31
  article-title: Brain lipid-binding protein is a direct target of Notch signaling in radial glial cells
  publication-title: Genes Dev.
  doi: 10.1101/gad.1302105
– volume: 501
  start-page: 373
  year: 2013
  ident: 10.1016/j.celrep.2023.113310_bib18
  article-title: Cerebral organoids model human brain development and microcephaly
  publication-title: Nature
  doi: 10.1038/nature12517
– volume: 11
  start-page: e3985
  year: 2021
  ident: 10.1016/j.celrep.2023.113310_bib71
  article-title: Production of Phenotypically Uniform Human Cerebral Organoids from Pluripotent Stem Cells
  publication-title: Bio. Protoc.
  doi: 10.21769/BioProtoc.3985
– volume: 73
  start-page: 60
  year: 2016
  ident: 10.1016/j.celrep.2023.113310_bib2
  article-title: Association of Cerebrospinal Fluid Neurofilament Light Concentration With Alzheimer Disease Progression
  publication-title: JAMA Neurol.
  doi: 10.1001/jamaneurol.2015.3037
– volume: 18
  start-page: 792
  year: 2022
  ident: 10.1016/j.celrep.2023.113310_bib8
  article-title: Human iPSC-Derived Neural Models for Studying Alzheimer’s Disease: from Neural Stem Cells to Cerebral Organoids
  publication-title: Stem Cell Rev. Rep.
  doi: 10.1007/s12015-021-10254-3
– volume: 21
  start-page: 293
  year: 2001
  ident: 10.1016/j.celrep.2023.113310_bib52
  article-title: Neurofilament proteins NF-L, NF-M and NF-H in brain of patients with Down syndrome and Alzheimer’s disease
  publication-title: Amino Acids
  doi: 10.1007/s007260170015
– volume: 72
  start-page: 912
  year: 2015
  ident: 10.1016/j.celrep.2023.113310_bib61
  article-title: Brain Imaging and Blood Biomarker Abnormalities in Children With Autosomal Dominant Alzheimer Disease: A Cross-Sectional Study
  publication-title: JAMA Neurol.
  doi: 10.1001/jamaneurol.2015.1099
– volume: 11
  year: 2016
  ident: 10.1016/j.celrep.2023.113310_bib12
  article-title: Self-Organizing 3D Human Neural Tissue Derived from Induced Pluripotent Stem Cells Recapitulate Alzheimer’s Disease Phenotypes
  publication-title: PLoS One
  doi: 10.1371/journal.pone.0161969
– volume: 91
  start-page: 56
  year: 2016
  ident: 10.1016/j.celrep.2023.113310_bib39
  article-title: Neurofilament Light Chain in Blood and CSF as Marker of Disease Progression in Mouse Models and in Neurodegenerative Diseases
  publication-title: Neuron
  doi: 10.1016/j.neuron.2016.05.018
– volume: 86
  start-page: 8045
  year: 1989
  ident: 10.1016/j.celrep.2023.113310_bib47
  article-title: Abnormal processing of multiple proteins in Alzheimer disease
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.86.20.8045
– year: 2020
  ident: 10.1016/j.celrep.2023.113310_bib95
– volume: 12
  start-page: 160
  year: 2020
  ident: 10.1016/j.celrep.2023.113310_bib4
  article-title: The pleiotropic role of p53 in functional/dysfunctional neurons: focus on pathogenesis and diagnosis of Alzheimer’s disease
  publication-title: Alzheimer's Res. Ther.
  doi: 10.1186/s13195-020-00732-0
– year: 2021
  ident: 10.1016/j.celrep.2023.113310_bib37
  article-title: Culture Variabilities of Human iPSC-Derived Cerebral Organoids Are a Major Issue for the Modelling of Phenotypes Observed in Alzheimer’s Disease
  publication-title: Stem Cell Rev and Rep
– volume: 1727
  year: 2020
  ident: 10.1016/j.celrep.2023.113310_bib13
  article-title: Back to the origins: Human brain organoids to investigate neurodegeneration
  publication-title: Brain Res.
  doi: 10.1016/j.brainres.2019.146561
– volume: 374
  start-page: 1106
  year: 2021
  ident: 10.1016/j.celrep.2023.113310_bib62
  article-title: Impact of neurodegenerative diseases on human adult hippocampal neurogenesis
  publication-title: Science
  doi: 10.1126/science.abl5163
– volume: 10
  start-page: 1709
  year: 2015
  ident: 10.1016/j.celrep.2023.113310_bib80
  article-title: Advanced CUBIC protocols for whole-brain and whole-body clearing and imaging
  publication-title: Nat. Protoc.
  doi: 10.1038/nprot.2015.085
– volume: 269
  start-page: 973
  year: 1995
  ident: 10.1016/j.celrep.2023.113310_bib15
  article-title: Candidate gene for the chromosome 1 familial Alzheimer’s disease locus
  publication-title: Science
  doi: 10.1126/science.7638622
– volume: 95
  start-page: 3160
  year: 2023
  ident: 10.1016/j.celrep.2023.113310_bib77
  article-title: Single Cerebral Organoid Mass Spectrometry of Cell-Specific Protein and Glycosphingolipid Traits
  publication-title: Anal. Chem.
  doi: 10.1021/acs.analchem.2c00981
– volume: 79
  start-page: e51
  year: 2018
  ident: 10.1016/j.celrep.2023.113310_bib21
  article-title: Transcription Factor–Mediated Differentiation of Human iPSCs into Neurons
  publication-title: Curr. Protoc. Cell Biol.
  doi: 10.1002/cpcb.51
– volume: 21
  start-page: 224
  year: 2020
  ident: 10.1016/j.celrep.2023.113310_bib94
  article-title: CSS: cluster similarity spectrum integration of single-cell genomics data
  publication-title: Genome Biol.
  doi: 10.1186/s13059-020-02147-4
– volume: 18
  start-page: 380
  year: 2019
  ident: 10.1016/j.celrep.2023.113310_bib83
  article-title: Multiplex Assay for Quantification of Acute Phase Proteins and Immunoglobulin A in Dried Blood Spots
  publication-title: J. Proteome Res.
– volume: 53
  year: 2021
  ident: 10.1016/j.celrep.2023.113310_bib17
  article-title: Generation of six human iPSC lines from patients with a familial Alzheimer’s disease (n = 3) and sex- and age-matched healthy controls (n = 3)
  publication-title: Stem Cell Res.
– volume: 68
  start-page: 682
  year: 2010
  ident: 10.1016/j.celrep.2023.113310_bib25
  article-title: The Transcription Factor Pax6 Regulates Survival of Dopaminergic Olfactory Bulb Neurons via Crystallin αA
  publication-title: Neuron
  doi: 10.1016/j.neuron.2010.09.030
– volume: 3
  start-page: 45
  year: 1993
  ident: 10.1016/j.celrep.2023.113310_bib49
  article-title: Altered tau and neurofilament proteins in neuro-degenerative diseases: diagnostic implications for Alzheimer’s disease and Lewy body dementias
  publication-title: Brain Pathol.
  doi: 10.1111/j.1750-3639.1993.tb00725.x
– start-page: 191
  year: 2021
  ident: 10.1016/j.celrep.2023.113310_bib53
  article-title: Chapter 13 - Cholinergic neurodegeneration in Alzheimer disease mouse models
  doi: 10.1016/B978-0-12-819973-2.00013-7
– volume: 376
  start-page: 775
  year: 1995
  ident: 10.1016/j.celrep.2023.113310_bib16
  article-title: Familial Alzheimer’s disease in kindreds with missense mutations in a gene on chromosome 1 related to the Alzheimer’s disease type 3 gene
  publication-title: Nature
  doi: 10.1038/376775a0
– volume: 5
  start-page: 77
  year: 2017
  ident: 10.1016/j.celrep.2023.113310_bib55
  article-title: CRISPR/Cas9-Correctable mutation-related molecular and physiological phenotypes in iPSC-derived Alzheimer’s PSEN2N141Ineurons
  publication-title: Acta Neuropathol. Commun.
  doi: 10.1186/s40478-017-0475-z
– volume: 14
  start-page: 101
  year: 2016
  ident: 10.1016/j.celrep.2023.113310_bib3
  article-title: Alzheimer’s Disease: Targeting the Cholinergic System
  publication-title: Curr. Neuropharmacol.
  doi: 10.2174/1570159X13666150716165726
– volume: 40
  year: 2019
  ident: 10.1016/j.celrep.2023.113310_bib79
  article-title: Differentiation of neural rosettes from human pluripotent stem cells in vitro is sequentially regulated on a molecular level and accomplished by the mechanism reminiscent of secondary neurulation
  publication-title: Stem Cell Res.
  doi: 10.1016/j.scr.2019.101563
– volume: 574
  start-page: 418
  year: 2019
  ident: 10.1016/j.celrep.2023.113310_bib28
  article-title: Organoid single-cell genomic atlas uncovers human-specific features of brain development
  publication-title: Nature
  doi: 10.1038/s41586-019-1654-9
– volume: 18
  start-page: 1516
  year: 2023
  ident: 10.1016/j.celrep.2023.113310_bib68
  article-title: Familial Alzheimer’s disease-associated PSEN1 mutations affect neurodevelopment through increased Notch signaling
  publication-title: Stem Cell Rep.
  doi: 10.1016/j.stemcr.2023.05.018
– volume: 9
  year: 2014
  ident: 10.1016/j.celrep.2023.113310_bib60
  article-title: Widespread Disruption of Functional Brain Organization in Early-Onset Alzheimer’s Disease
  publication-title: PLoS One
  doi: 10.1371/journal.pone.0102995
– volume: 139
  start-page: 4111
  year: 2012
  ident: 10.1016/j.celrep.2023.113310_bib23
  article-title: In vitro organogenesis in three dimensions: self-organising stem cells
  publication-title: Development
  doi: 10.1242/dev.079590
– volume: 8
  start-page: 222
  year: 2020
  ident: 10.1016/j.celrep.2023.113310_bib19
  article-title: Label-free vibrational imaging of different Aβ plaque types in Alzheimer’s disease reveals sequential events in plaque development
  publication-title: Acta Neuropathol. Commun.
  doi: 10.1186/s40478-020-01091-5
– volume: 17
  start-page: 647
  year: 2023
  ident: 10.1016/j.celrep.2023.113310_bib78
  article-title: Glioblastoma and cerebral organoids: development and analysis of an in vitro model for glioblastoma migration
  publication-title: Mol. Oncol.
  doi: 10.1002/1878-0261.13389
– volume: 7
  start-page: 2320
  year: 2017
  ident: 10.1016/j.celrep.2023.113310_bib75
  article-title: An episomal vector-based CRISPR/Cas9 system for highly efficient gene knockout in human pluripotent stem cells
  publication-title: Sci. Rep.
  doi: 10.1038/s41598-017-02456-y
– volume: 10
  year: 2021
  ident: 10.1016/j.celrep.2023.113310_bib84
  article-title: Targeted mass spectrometry for monitoring of neural differentiation
  publication-title: Biol. Open
  doi: 10.1242/bio.058727
– volume: 36
  start-page: 411
  year: 2018
  ident: 10.1016/j.celrep.2023.113310_bib86
  article-title: Integrating single-cell transcriptomic data across different conditions, technologies, and species
  publication-title: Nat. Biotechnol.
  doi: 10.1038/nbt.4096
– volume: 102
  start-page: 723
  year: 2001
  ident: 10.1016/j.celrep.2023.113310_bib59
  article-title: Alzheimer’s disease as a disorder of mechanisms underlying structural brain self-organization
  publication-title: Neuroscience
  doi: 10.1016/S0306-4522(00)00516-9
– volume: 7
  start-page: 265
  year: 1993
  ident: 10.1016/j.celrep.2023.113310_bib48
  article-title: Probing modifications of the neuronal cytoskeleton
  publication-title: Mol. Neurobiol.
  doi: 10.1007/BF02769179
– volume: 7
  start-page: e45069
  year: 2012
  ident: 10.1016/j.celrep.2023.113310_bib5
  article-title: Astrocyte Senescence as a Component of Alzheimer’s Disease
  publication-title: PLoS One
  doi: 10.1371/journal.pone.0045069
– volume: 8
  year: 2019
  ident: 10.1016/j.celrep.2023.113310_bib32
  article-title: Mechanisms of hyperexcitability in Alzheimer’s disease hiPSC-derived neurons and cerebral organoids vs isogenic controls
  publication-title: Elife
  doi: 10.7554/eLife.50333
– volume: 64
  start-page: 352
  year: 1991
  ident: 10.1016/j.celrep.2023.113310_bib45
  article-title: Comparative epitope analysis of neuronal cytoskeletal proteins in Alzheimer’s disease senile plaque neurites and neuropil threads
  publication-title: Lab. Invest.
– volume: 26
  start-page: 1112
  year: 2019
  ident: 10.1016/j.celrep.2023.113310_bib35
  article-title: REST and Neural Gene Network Dysregulation in iPSC Models of Alzheimer’s Disease
  publication-title: Cell Rep.
  doi: 10.1016/j.celrep.2019.01.023
– volume: 9
  start-page: 3
  year: 2014
  ident: 10.1016/j.celrep.2023.113310_bib56
  article-title: Stem cell derived basal forebrain cholinergic neurons from Alzheimer’s disease patients are more susceptible to cell death
  publication-title: Mol. Neurodegener.
  doi: 10.1186/1750-1326-9-3
– volume: 17
  start-page: 170
  year: 2016
  ident: 10.1016/j.celrep.2023.113310_bib7
  article-title: Pluripotent stem cells in disease modelling and drug discovery
  publication-title: Nat. Rev. Mol. Cell Biol.
  doi: 10.1038/nrm.2015.27
– volume: 38
  start-page: 1408
  year: 2020
  ident: 10.1016/j.celrep.2023.113310_bib91
  article-title: Generalizing RNA velocity to transient cell states through dynamical modeling
  publication-title: Nat. Biotechnol.
  doi: 10.1038/s41587-020-0591-3
– volume: 225
  start-page: 201
  year: 1997
  ident: 10.1016/j.celrep.2023.113310_bib42
  article-title: Abnormal distribution of neurofilament L in neurons with Alzheimer’s disease
  publication-title: Neurosci. Lett.
  doi: 10.1016/S0304-3940(97)00223-1
– start-page: 1
  year: 2020
  ident: 10.1016/j.celrep.2023.113310_bib34
  article-title: Patient-specific Alzheimer-like pathology in trisomy 21 cerebral organoids reveals BACE2 as a gene dose-sensitive AD suppressor in human brain
  publication-title: Mol. Psychiatr.
– volume: 8
  start-page: 7900
  year: 2017
  ident: 10.1016/j.celrep.2023.113310_bib30
  article-title: Early pathogenic event of Alzheimer’s disease documented in iPSCs from patients with PSEN1 mutations
  publication-title: Oncotarget
  doi: 10.18632/oncotarget.13776
– volume: 26
  start-page: 1521
  year: 2017
  ident: 10.1016/j.celrep.2023.113310_bib72
  article-title: An Efficient Method for Generation of Knockout Human Embryonic Stem Cells Using CRISPR/Cas9 System
  publication-title: Stem Cell. Dev.
  doi: 10.1089/scd.2017.0058
– volume: 12
  start-page: 280
  year: 2021
  ident: 10.1016/j.celrep.2023.113310_bib36
  article-title: A logical network-based drug-screening platform for Alzheimer’s disease representing pathological features of human brain organoids
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-020-20440-5
– volume: 28
  start-page: 1533
  year: 2021
  ident: 10.1016/j.celrep.2023.113310_bib65
  article-title: Age-dependent instability of mature neuronal fate in induced neurons from Alzheimer’s patients
  publication-title: Cell Stem Cell
  doi: 10.1016/j.stem.2021.04.004
– volume: 88
  start-page: 7552
  year: 1991
  ident: 10.1016/j.celrep.2023.113310_bib44
  article-title: Senile plaque neurites in Alzheimer disease accumulate amyloid precursor protein
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.88.17.7552
– volume: 28
  start-page: 1
  year: 2016
  ident: 10.1016/j.celrep.2023.113310_bib69
  article-title: Beyond gamma-secretase activity: The multifunctional nature of presenilins in cell signalling pathways
  publication-title: Cell. Signal.
  doi: 10.1016/j.cellsig.2015.10.006
– volume: 9
  start-page: 2329
  year: 2014
  ident: 10.1016/j.celrep.2023.113310_bib76
  article-title: Generation of cerebral organoids from human pluripotent stem cells
  publication-title: Nat. Protoc.
  doi: 10.1038/nprot.2014.158
– volume: 156
  start-page: 100
  year: 1999
  ident: 10.1016/j.celrep.2023.113310_bib41
  article-title: Neurochemical diversity of dystrophic neurites in the early and late stages of Alzheimer’s disease
  publication-title: Exp. Neurol.
  doi: 10.1006/exnr.1998.7010
– volume: 53
  year: 2021
  ident: 10.1016/j.celrep.2023.113310_bib73
  article-title: Generation of three human iPSC lines from patients with a spontaneous late-onset Alzheimer’s disease and three sex- and age-matched healthy controls
  publication-title: Stem Cell Res.
– volume: 375
  start-page: 754
  year: 1995
  ident: 10.1016/j.celrep.2023.113310_bib14
  article-title: Cloning of a gene bearing missense mutations in early-onset familial Alzheimer’s disease
  publication-title: Nature
  doi: 10.1038/375754a0
– volume: 739
  start-page: 79
  year: 1996
  ident: 10.1016/j.celrep.2023.113310_bib46
  article-title: Plaque biogenesis in brain aging and Alzheimer’s disease. I. Progressive changes in phosphorylation states of paired helical filaments and neurofilaments
  publication-title: Brain Res.
  doi: 10.1016/S0006-8993(96)00811-6
– volume: 129
  start-page: 756
  year: 2014
  ident: 10.1016/j.celrep.2023.113310_bib1
  article-title: Insights into the physiological function of the β-amyloid precursor protein: beyond Alzheimer’s disease
  publication-title: J. Neurochem.
  doi: 10.1111/jnc.12675
– volume: 98
  start-page: 1141
  year: 2018
  ident: 10.1016/j.celrep.2023.113310_bib9
  article-title: APOE4 Causes Widespread Molecular and Cellular Alterations Associated with Alzheimer’s Disease Phenotypes in Human iPSC-Derived Brain Cell Types
  publication-title: Neuron
  doi: 10.1016/j.neuron.2018.05.008
– volume: 16
  start-page: 273
  year: 2020
  ident: 10.1016/j.celrep.2023.113310_bib20
  article-title: C99 selectively accumulates in vulnerable neurons in Alzheimer’s disease
  publication-title: Alzheimers Dement.
  doi: 10.1016/j.jalz.2019.09.002
– volume: 104
  start-page: 256
  year: 2019
  ident: 10.1016/j.celrep.2023.113310_bib74
  article-title: A Large Panel of Isogenic APP and PSEN1 Mutant Human iPSC Neurons Reveals Shared Endosomal Abnormalities Mediated by APP β-CTFs, Not Aβ
  publication-title: Neuron
  doi: 10.1016/j.neuron.2019.07.010
– volume: 234
  start-page: 718
  year: 2005
  ident: 10.1016/j.celrep.2023.113310_bib26
  article-title: Comparative analysis of Six3 and Six6 distribution in the developing and adult mouse brain
  publication-title: Dev. Dynam.
  doi: 10.1002/dvdy.20463
– volume: 62
  start-page: 1
  year: 1994
  ident: 10.1016/j.celrep.2023.113310_bib43
  article-title: Alterations in neurofilament protein immunoreactivity in human hippocampal neurons related to normal aging and Alzheimer’s disease
  publication-title: Neuroscience
  doi: 10.1016/0306-4522(94)90310-7
– volume: 9
  year: 2020
  ident: 10.1016/j.celrep.2023.113310_bib87
  article-title: SoupX removes ambient RNA contamination from droplet-based single-cell RNA sequencing data
  publication-title: GigaScience
  doi: 10.1093/gigascience/giaa151
– volume: 162
  start-page: 564
  year: 2015
  ident: 10.1016/j.celrep.2023.113310_bib33
  article-title: Deterministic Restriction on Pluripotent State Dissolution by Cell-Cycle Pathways
  publication-title: Cell
  doi: 10.1016/j.cell.2015.07.001
– volume: 13
  start-page: 33
  year: 2018
  ident: 10.1016/j.celrep.2023.113310_bib54
  article-title: iPSC-derived familial Alzheimer’s PSEN2N141I cholinergic neurons exhibit mutation-dependent molecular pathology corrected by insulin signaling
  publication-title: Mol. Neurodegener.
  doi: 10.1186/s13024-018-0265-5
– volume: 19
  start-page: 159
  year: 2022
  ident: 10.1016/j.celrep.2023.113310_bib92
  article-title: CellRank for directed single-cell fate mapping
  publication-title: Nat. Methods
  doi: 10.1038/s41592-021-01346-6
– year: 2019
  ident: 10.1016/j.celrep.2023.113310_bib22
  article-title: PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data
  publication-title: Database 2019
– volume: 88
  start-page: 1
  year: 1994
  ident: 10.1016/j.celrep.2023.113310_bib50
  article-title: Characterization of a shared epitope in cortical Lewy body fibrils and Alzheimer paired helical filaments
  publication-title: Acta Neuropathol.
  doi: 10.1007/BF00294352
– volume: 21
  start-page: 3158
  year: 2020
  ident: 10.1016/j.celrep.2023.113310_bib40
  article-title: Utility of Animal Models to Understand Human Alzheimer’s Disease, Using the Mastermind Research Approach to Avoid Unnecessary Further Sacrifices of Animals
  publication-title: Int. J. Mol. Sci.
  doi: 10.3390/ijms21093158
– volume: 34
  start-page: 525
  year: 2016
  ident: 10.1016/j.celrep.2023.113310_bib90
  article-title: Near-optimal probabilistic RNA-seq quantification
  publication-title: Nat. Biotechnol.
  doi: 10.1038/nbt.3519
– year: 2019
  ident: 10.1016/j.celrep.2023.113310_bib93
– volume: 621
  start-page: 365
  year: 2023
  ident: 10.1016/j.celrep.2023.113310_bib67
  article-title: Inferring and perturbing cell fate regulomes in human brain organoids
  publication-title: Nature
  doi: 10.1038/s41586-022-05279-8
– volume: 34
  year: 2021
  ident: 10.1016/j.celrep.2023.113310_bib11
  article-title: Familial Alzheimer’s Disease Mutations in PSEN1 Lead to Premature Human Stem Cell Neurogenesis
  publication-title: Cell Rep.
  doi: 10.1016/j.celrep.2020.108615
– volume: 19
  start-page: 477
  year: 2018
  ident: 10.1016/j.celrep.2023.113310_bib96
  article-title: Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics
  publication-title: BMC Genom.
  doi: 10.1186/s12864-018-4772-0
– volume: 11
  start-page: 5540
  year: 2020
  ident: 10.1016/j.celrep.2023.113310_bib10
  article-title: APOE4 exacerbates synapse loss and neurodegeneration in Alzheimer’s disease patient iPSC-derived cerebral organoids
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-020-19264-0
SSID ssj0000601194
Score 2.4826818
Snippet During the past two decades, induced pluripotent stem cells (iPSCs) have been widely used to study human neural development and disease. Especially in the...
SourceID doaj
unpaywall
proquest
pubmed
crossref
elsevier
SourceType Open Website
Open Access Repository
Aggregation Database
Index Database
Enrichment Source
Publisher
StartPage 113310
SubjectTerms Alzheimer Disease - genetics
Alzheimer Disease - pathology
Alzheimer’s disease
cerebral organoids
CP: Developmental biology
CP: Neuroscience
development
Humans
induced pluripotent stem cells
Induced Pluripotent Stem Cells - pathology
Mutation - genetics
Neurons
Organoids - pathology
Presenilin-1 - genetics
Presenilin-2 - genetics
single-cell mRNA sequencing
SummonAdditionalLinks – databaseName: DOAJ Directory of Open Access Journals
  dbid: DOA
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV1Lb9QwELZQpQo4IN5dKMhIXEOTeJJsjm3VqkKiQoJKvVl-jNVFabbaR1E58R848ff4JZ2Jk2URh-XANfF7xp7PHvsbId66FMcYxiapyDonkAWbWE8bV-_AkAEMBXb0xR9Oy5MzeH9enK-F-uI7YZEeOA7cXqmygAVy9DuEwtYWCswrQs1g2Pghr75kxtY2U3ENZi4zGN7KdRe6HDYzZIrKXHEkE8WPZtdsUUfZ_4dJ-hty3hd3l-2VuflqmmbNDB0_FA96_Cj3Y7sfiTvYPhbbMaLkzRPx4xBn7ApuZBeuaTrxc-lJya7RS35JInse1bnkA1i533y7wMklzn59_0kJo7Mm_vr46eg028vl5TI66-fywlwjFRbiEikXnci4QD5TJAsoTetl532nyvzvy0hPxdnx0efDk6SPu5A4qGCRKESwmatptpPYDCEYqyxBF8xtVRNCgNykuU2DgTLYzBfBeVenDgMAGOWDeia22mmLO0KGmuAXZqWnnQt452i_nRZGBQI1zkOqRkINEtCuJyXn2BiNHm6ffdFRbprlpqPcRiJZ5bqKpBwb0h-wcFdpmVK7-0Ci0L2i6U2KNhLVoBq6RycRdVBRkw3Vvxk0SdPkZY-MaXG6nOuchiOtq7qsRuJ5VLFVI1U1LqGqKfe7lc79U29f_I_evhT3uEh-dZmPd8XWYrbEVwS_FvZ1N9NuAT24Lio
  priority: 102
  providerName: Directory of Open Access Journals
– databaseName: ScienceDirect Free and Delayed Access Titles
  dbid: IXB
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1La9wwEBYhUNoeSt_ZvlChV3dtS7bWx2RJCIWGQhrYm9FjRLY43mUfKemp_6Gn_r3-ks5ItpvQQ0qPliVZ9oxnvtFoZhh7Z1OYgJ_oRKF2TmTmTWIcGq7OSo0K0BcQ0hd_PCmPz-SHWTHbYdM-FoaOVXayP8r0IK27lnH3NcfL-Xx8mqPtgtpJIYgmk4rsdiFVCOKbHQz7LJRvJAv1EKl_QgP6CLpwzMtCswJKXJkLqm8iKJT2moYKifxvKKq_geh9dnfbLvXVV90015TT0UP2oEOVfD8u_BHbgfYxuxPrTF49YT-msCIHccNDEafF3K25Q9a7BMcpvoR32VXXnLZl-X7z7RzmF7D69f0ndowunHjr0-nhSTbO-cU2uvDX_FxfAk7mo-Dkm0BImpB2GlEvct06Hnzy-DD354jSU3Z2dPh5epx01RgSK5XcJAJAmsxWKAOQmBpxjREGAQ3kRlWIG2Su09ykXsvSm8wV3jpbpRa8lFIL58UzttsuWthj3FcIyiArHdoz0lmLVnhaaOER6lgnUzFioqdAbbtU5VQxo6n7M2lf6ki3muhWR7qNWDKMWsZUHbf0PyDiDn0p0XZoQFLUHafVpcg8FEDFF0EWpjKygFyh0SY1YS8YMdWzRn2Db3Gq-S2Pf9tzUo2_NPlpdAuL7brO8XOklapKNWLPI4sNixRqUkpV4ej3A8_909u--O-FvmT36IoCMPPJK7a7WW3hNSKxjXkTfrXfCZkx2g
  priority: 102
  providerName: Elsevier
– databaseName: Unpaywall
  dbid: UNPAY
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwlV3JbtswECVSB0XbQ_fF3cACvcqWSEqyjm6QIChQI2hqID0JXIaIU0c2vKRITv2Hnvp7_ZLOiJKbIoekR9sktfCZ84acmcfYexvDAPxARzla50gl3kTGoePqrNJoAH0KdfniT6Nsf6w-HqVHW6wVLqSoStqxrtfo5t31DwV6KWiHcqTL5DzF_bnzt9h2RmdKHbY9Hh0Mv5KInKDwLFGLigm0vBHaoqxNl6tjunDoBVCVSiFJzERS3uwlc1RX7f_HKl1lnffYnXU11-ff9XR6yRLtPWCf23yeEIDyrbdemZ69uFre8eYP-ZDdb3gpH4Z2j9gWVI_Z7aBUef6E_dyBBR0xT3ktAzWbuCV3CN4zcJwyVHhTn3XJaWOXD6cXxzA5hcXvH7-wYTgECj8dHO6Okr7gp-sQBLDkx_oMcDAfll6-qqFAA9JeJVpWrivH61N9vJj7G-T0lI33dr_s7EeNnkNkVa5WkQRQJrEFriIIB43MyEiDlAiEyQtkHkroWJjYa5V5k7jUW2eL2IJXSmnpvHzGOtWsgheM-wJpHSSZQ49IOWvRj49TLT2SJetULLtMttNa2qbYOWluTMs2qu2kDGAoCQxlAEOXRZte81Ds45r2Hwgxm7ZUqrv-AqeibCa2zGTiIQWSbwSVmsKoFESObp_SxN6gy_IWb2XDegKbwaEm11z-XQvPEhcFgpSuYLZelgJfR1zkRZZ32fOA281NynyQqbzA3r0NkG_0tC__t8Mrdpc-UeamGLxmndViDW-Qwq3M2-ZP-wdyr0Ll
  priority: 102
  providerName: Unpaywall
Title Cerebral organoids derived from patients with Alzheimer’s disease with PSEN1/2 mutations have defective tissue patterning and altered development
URI https://dx.doi.org/10.1016/j.celrep.2023.113310
https://www.ncbi.nlm.nih.gov/pubmed/37864790
https://www.proquest.com/docview/2880097967
http://www.cell.com/article/S2211124723013220/pdf
https://doaj.org/article/631fe5e0589e45b9b45e276424a7431e
UnpaywallVersion publishedVersion
Volume 42
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
journalDatabaseRights – providerCode: PRVAFT
  databaseName: Open Access Digital Library
  customDbUrl:
  eissn: 2211-1247
  dateEnd: 99991231
  omitProxy: true
  ssIdentifier: ssj0000601194
  issn: 2211-1247
  databaseCode: KQ8
  dateStart: 20120101
  isFulltext: true
  titleUrlDefault: http://grweb.coalliance.org/oadl/oadl.html
  providerName: Colorado Alliance of Research Libraries
– providerCode: PRVAFT
  databaseName: Open Access Digital Library
  customDbUrl:
  eissn: 2211-1247
  dateEnd: 99991231
  omitProxy: true
  ssIdentifier: ssj0000601194
  issn: 2211-1247
  databaseCode: KQ8
  dateStart: 20120126
  isFulltext: true
  titleUrlDefault: http://grweb.coalliance.org/oadl/oadl.html
  providerName: Colorado Alliance of Research Libraries
– providerCode: PRVAON
  databaseName: DOAJ Directory of Open Access Journals
  customDbUrl:
  eissn: 2211-1247
  dateEnd: 99991231
  omitProxy: true
  ssIdentifier: ssj0000601194
  issn: 2211-1247
  databaseCode: DOA
  dateStart: 20120101
  isFulltext: true
  titleUrlDefault: https://www.doaj.org/
  providerName: Directory of Open Access Journals
– providerCode: PRVESC
  databaseName: Elsevier Free Content
  customDbUrl:
  eissn: 2211-1247
  dateEnd: 99991231
  omitProxy: true
  ssIdentifier: ssj0000601194
  issn: 2211-1247
  databaseCode: IXB
  dateStart: 20120126
  isFulltext: true
  titleUrlDefault: https://www.sciencedirect.com
  providerName: Elsevier
– providerCode: PRVBFR
  databaseName: Free Medical Journals
  customDbUrl:
  eissn: 2211-1247
  dateEnd: 99991231
  omitProxy: true
  ssIdentifier: ssj0000601194
  issn: 2211-1247
  databaseCode: DIK
  dateStart: 20120101
  isFulltext: true
  titleUrlDefault: http://www.freemedicaljournals.com
  providerName: Flying Publisher
– providerCode: PRVFQY
  databaseName: GFMER Free Medical Journals
  customDbUrl:
  eissn: 2211-1247
  dateEnd: 99991231
  omitProxy: true
  ssIdentifier: ssj0000601194
  issn: 2211-1247
  databaseCode: GX1
  dateStart: 0
  isFulltext: true
  titleUrlDefault: http://www.gfmer.ch/Medical_journals/Free_medical.php
  providerName: Geneva Foundation for Medical Education and Research
– providerCode: PRVLSH
  databaseName: Elsevier Journals
  customDbUrl:
  mediaType: online
  eissn: 2211-1247
  dateEnd: 99991231
  omitProxy: true
  ssIdentifier: ssj0000601194
  issn: 2211-1247
  databaseCode: AKRWK
  dateStart: 20120126
  isFulltext: true
  providerName: Library Specific Holdings
– providerCode: PRVFZP
  databaseName: Scholars Portal Journals: Open Access
  customDbUrl:
  eissn: 2211-1247
  dateEnd: 20250930
  omitProxy: true
  ssIdentifier: ssj0000601194
  issn: 2211-1247
  databaseCode: M48
  dateStart: 20120101
  isFulltext: true
  titleUrlDefault: http://journals.scholarsportal.info
  providerName: Scholars Portal
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwjV1Lb9NAEF6VVohyQLwbHtEiITi52Ou1HR8QSqtWBalRJYgUTtY-ZtUg10nzKIR_wT9mxmunVIDaiw_xPpyd2Z1vdnbnY-y1CaEHrqeCDK1zICOnA23RcbVGKjSALoE6ffHxID0ayk-jZLTB2kB7M4Dzf7p2xCc1nJW7P85XH3DCv788q2WgnAFlnxQxkZQgZHkzPQ-IWopCsA3Pxi22heZKkOofNz6AX64p7RlFn4Wg411CZu0Vu_-0fcWE1Zn-r1iyv5HqXXZnWU3V6rsqyz-s1-F9dq-Bnbzv9eQB24DqIbvtiShXj9ivfZhRBLnkNcvTZGzn3KJuXoDldAGFN-lX55z2bXm__HkK4zOYvcViPsLjX5x8PhhE7wQ_W_oI_5yfqgvAppxfV_miljM1RxuRaDa5qiyvQ_bYlb08wfSYDQ8PvuwfBQ1ZQ2BkJhdBDCB1ZHJcIlDWCmGPjjXiHRA6yxFWSKFCoUOnZOp0ZBNnrMlDA05KqWLr4idss5pUsMO4yxGzQZRadHekNQad9DBRsUMkZKwM4w6L2_EvTJPJnAg1yqI9svat8FIrSGqFl1qHBetaU5_J45ryeyTadVnKw13_gIIommldpHHkIAHiZgSZ6FzLBESGPp1UBM2gw7JWMYoG0niogk2Nr-n-VatHBc54CuOoCibLeSFwOMI8y9Osw556BVt_ZJz1UpnlWHt3rXE3-rfPbtDdc7ZNNegmpui9YJuL2RJeIiRb6G69lYHPj6O9bj29umxrODjpf_0NszI4og
linkProvider Scholars Portal
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwnV1Lb9QwELaqIlQ4IN4sTyNxDZvETrI5tqtWW2hXSG2l3iw_xupWaXa1j6Jy4j9w4u_xS5iJk6UVhyKuiV_xTGa-8XhmGPtgYxiAH-ioQO0cycSbyDg0XJ2VGhWgz6BJX3w4zkcn8tNpdrrBhl0sDF2rbGV_kOmNtG6f9Nvd7M8mk_5RirYLaqcCQTSZVGi338H5YrrXtX-6sz5ooYQjSVMQkTpE1KMLoWvueVmo5kCZK1NBBU4ExdJeU1FNJv8bmupvJHqfba3qmb76qqvqmnbae8getLCSb4eVP2IbUD9md0Ohyasn7McQ5uQhrnhTxWk6cQvukPcuwXEKMOFtetUFp3NZvl19O4PJBcx_ff-JDYMPJ7z6crQ7Tvopv1gFH_6Cn-lLwMF8kJx82VCSBqSjRlSMXNeON055nMz9uaP0lJ3s7R4PR1FbjiGyspDLSABIk9gShQBSUyOwMcIgooHUFCUCB5nqODWx1zL3JnGZt86WsQUvpdTCefGMbdbTGl4w7ktEZZDkDg0a6axFMzzOtPCIdayTsegx0VFA2TZXOZXMqFR3Ke1cBbopopsKdOuxaN1rFnJ13NJ-h4i7bkuZtpsHSArVsprKReIhA6q-CDIzpZEZpAVabVIT-IIeKzrWUDcYF4ea3DL9-46TFP7T5KjRNUxXC5XidsRlUeZFjz0PLLZepCgGuSxK7P1xzXP_9LUv_3uh79jW6PjwQB3sjz-_YvfoDUVjpoPXbHM5X8EbhGVL87b57X4DZLI0-w
linkToUnpaywall http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwlV3JbtswECVSB0XbQ_fF3cACvcqWSEqyjm6QIChQI2hqID0JXIaIU0c2vKRITv2Hnvp7_ZLOiJKbIoekR9sktfCZ84acmcfYexvDAPxARzla50gl3kTGoePqrNJoAH0KdfniT6Nsf6w-HqVHW6wVLqSoStqxrtfo5t31DwV6KWiHcqTL5DzF_bnzt9h2RmdKHbY9Hh0Mv5KInKDwLFGLigm0vBHaoqxNl6tjunDoBVCVSiFJzERS3uwlc1RX7f_HKl1lnffYnXU11-ff9XR6yRLtPWCf23yeEIDyrbdemZ69uFre8eYP-ZDdb3gpH4Z2j9gWVI_Z7aBUef6E_dyBBR0xT3ktAzWbuCV3CN4zcJwyVHhTn3XJaWOXD6cXxzA5hcXvH7-wYTgECj8dHO6Okr7gp-sQBLDkx_oMcDAfll6-qqFAA9JeJVpWrivH61N9vJj7G-T0lI33dr_s7EeNnkNkVa5WkQRQJrEFriIIB43MyEiDlAiEyQtkHkroWJjYa5V5k7jUW2eL2IJXSmnpvHzGOtWsgheM-wJpHSSZQ49IOWvRj49TLT2SJetULLtMttNa2qbYOWluTMs2qu2kDGAoCQxlAEOXRZte81Ds45r2Hwgxm7ZUqrv-AqeibCa2zGTiIQWSbwSVmsKoFESObp_SxN6gy_IWb2XDegKbwaEm11z-XQvPEhcFgpSuYLZelgJfR1zkRZZ32fOA281NynyQqbzA3r0NkG_0tC__t8Mrdpc-UeamGLxmndViDW-Qwq3M2-ZP-wdyr0Ll
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Cerebral+organoids+derived+from+patients+with+Alzheimer%27s+disease+with+PSEN1%2F2+mutations+have+defective+tissue+patterning+and+altered+development&rft.jtitle=Cell+reports+%28Cambridge%29&rft.au=Vanova%2C+Tereza&rft.au=Sedmik%2C+Jiri&rft.au=Raska%2C+Jan&rft.au=Amruz+Cerna%2C+Katerina&rft.date=2023-11-28&rft.issn=2211-1247&rft.eissn=2211-1247&rft.volume=42&rft.issue=11&rft.spage=113310&rft_id=info:doi/10.1016%2Fj.celrep.2023.113310&rft.externalDBID=NO_FULL_TEXT
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=2211-1247&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=2211-1247&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=2211-1247&client=summon