Automated diagnosis of macular edema and central serous retinopathy through robust reconstruction of 3D retinal surfaces
•An automated method is proposed here to diagnose two common macular syndromes by reconstructing 3D retinal surfaces.•To the best of our knowledge, this paper proposes a first ever novel self-diagnosis system to incorporate 3D OCT scans.•The self-diagnosis in our proposed system is based on multilev...
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          | Published in | Computer methods and programs in biomedicine Vol. 137; pp. 1 - 10 | 
|---|---|
| Main Authors | , , , , | 
| Format | Journal Article | 
| Language | English | 
| Published | 
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          Elsevier Ireland Ltd
    
        01.12.2016
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| Subjects | |
| Online Access | Get full text | 
| ISSN | 0169-2607 1872-7565 1872-7565  | 
| DOI | 10.1016/j.cmpb.2016.09.004 | 
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| Abstract | •An automated method is proposed here to diagnose two common macular syndromes by reconstructing 3D retinal surfaces.•To the best of our knowledge, this paper proposes a first ever novel self-diagnosis system to incorporate 3D OCT scans.•The self-diagnosis in our proposed system is based on multilevel support vector machines (SVM) classifier.•90 OCT volumes (30 healthy, 30 CSR and 30 ME) of 73 patients were considered in this research to test the proposed system.
Macular diseases tend to damage macula within human retina due to which the central vision of a person is affected. Macular edema (ME) and central serous retinopathy (CSR) are two of the most common macular diseases. Many researchers worked on automated detection of ME from optical coherence tomography (OCT) and fundus images, whereas few researchers have worked on diagnosing central serous retinopathy. But this paper proposes a fully automated method for the classification of ME and CSR through robust reconstruction of 3D OCT retinal surfaces.
The proposed system uses structure tensors to extract retinal layers from OCT images. The 3D retinal surface is then reconstructed by extracting the brightness scan (B-scan) thickness profile from each coherent tensor. The proposed system extracts 8 distinct features (3 based on retinal thickness profile of right side, 3 based on thickness profile of left side and 2 based on top surface and cyst spaces within retinal layers) from 30 labeled volumes (10 healthy, 10 CSR and 10 ME) which are used to train the supervised support vector machines (SVM) classifier.
In this research we have considered 90 OCT volumes (30 Healthy, 30 CSR and 30 ME) of 73 patients to test the proposed system where our proposed system correctly classified 89 out of 90 cases and has promising receiver operator characteristics (ROC) ratings with accuracy, sensitivity and specificity of 98.88%, 100%, and 96.66% respectively.
The proposed system is quite fast and robust in detecting all the three types of retinal pathologies from volumetric OCT scans. The proposed system is fully automated and provides an early and on fly diagnosis of ME and CSR syndromes. 3D macular thickness surfaces can further be used as decision support parameter in clinical studies to check the volume of cyst. | 
    
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| AbstractList | •An automated method is proposed here to diagnose two common macular syndromes by reconstructing 3D retinal surfaces.•To the best of our knowledge, this paper proposes a first ever novel self-diagnosis system to incorporate 3D OCT scans.•The self-diagnosis in our proposed system is based on multilevel support vector machines (SVM) classifier.•90 OCT volumes (30 healthy, 30 CSR and 30 ME) of 73 patients were considered in this research to test the proposed system.
Macular diseases tend to damage macula within human retina due to which the central vision of a person is affected. Macular edema (ME) and central serous retinopathy (CSR) are two of the most common macular diseases. Many researchers worked on automated detection of ME from optical coherence tomography (OCT) and fundus images, whereas few researchers have worked on diagnosing central serous retinopathy. But this paper proposes a fully automated method for the classification of ME and CSR through robust reconstruction of 3D OCT retinal surfaces.
The proposed system uses structure tensors to extract retinal layers from OCT images. The 3D retinal surface is then reconstructed by extracting the brightness scan (B-scan) thickness profile from each coherent tensor. The proposed system extracts 8 distinct features (3 based on retinal thickness profile of right side, 3 based on thickness profile of left side and 2 based on top surface and cyst spaces within retinal layers) from 30 labeled volumes (10 healthy, 10 CSR and 10 ME) which are used to train the supervised support vector machines (SVM) classifier.
In this research we have considered 90 OCT volumes (30 Healthy, 30 CSR and 30 ME) of 73 patients to test the proposed system where our proposed system correctly classified 89 out of 90 cases and has promising receiver operator characteristics (ROC) ratings with accuracy, sensitivity and specificity of 98.88%, 100%, and 96.66% respectively.
The proposed system is quite fast and robust in detecting all the three types of retinal pathologies from volumetric OCT scans. The proposed system is fully automated and provides an early and on fly diagnosis of ME and CSR syndromes. 3D macular thickness surfaces can further be used as decision support parameter in clinical studies to check the volume of cyst. Highlights • This paper proposes a novel approach to automatically diagnose Macular Edema (ME), Central Serous Retinopathy (CSR) and healthy pathologies from Optical Coherence Tomography (OCT) volumes through robust reconstruction of 3D OCT retinal surfaces. • To the best of our knowledge, this paper proposes a first ever novel approach to incorporate 3D OCT volumes to automatically diagnose and screen ME, CSR and healthy subjects. • The proposed method is fully automated and it uses a Support Vector Machine (SVM) based multilevel classification system to diagnose all the three types of macular pathologies from OCT volumes. Rather than relying on a single B-Scan selected subjectively, the proposed method incorporates all the B-Scan of the OCT volume to reconstruct 3D retinal surfaces which depicts the accurate visualization of retinal thickness within macular pathology. • 90 OCT volumes (30 Healthy, 30 CSR and 30 ME) of 73 patients were considered in this research to test the proposed system where our proposed system correctly classified 89 out of 90 cases with accuracy, sensitivity and specificity of 98.88%, 100%, 96.66% respectively. Macular diseases tend to damage macula within human retina due to which the central vision of a person is affected. Macular edema (ME) and central serous retinopathy (CSR) are two of the most common macular diseases. Many researchers worked on automated detection of ME from optical coherence tomography (OCT) and fundus images, whereas few researchers have worked on diagnosing central serous retinopathy. But this paper proposes a fully automated method for the classification of ME and CSR through robust reconstruction of 3D OCT retinal surfaces.BACKGROUND AND OBJECTIVESMacular diseases tend to damage macula within human retina due to which the central vision of a person is affected. Macular edema (ME) and central serous retinopathy (CSR) are two of the most common macular diseases. Many researchers worked on automated detection of ME from optical coherence tomography (OCT) and fundus images, whereas few researchers have worked on diagnosing central serous retinopathy. But this paper proposes a fully automated method for the classification of ME and CSR through robust reconstruction of 3D OCT retinal surfaces.The proposed system uses structure tensors to extract retinal layers from OCT images. The 3D retinal surface is then reconstructed by extracting the brightness scan (B-scan) thickness profile from each coherent tensor. The proposed system extracts 8 distinct features (3 based on retinal thickness profile of right side, 3 based on thickness profile of left side and 2 based on top surface and cyst spaces within retinal layers) from 30 labeled volumes (10 healthy, 10 CSR and 10 ME) which are used to train the supervised support vector machines (SVM) classifier.METHODSThe proposed system uses structure tensors to extract retinal layers from OCT images. The 3D retinal surface is then reconstructed by extracting the brightness scan (B-scan) thickness profile from each coherent tensor. The proposed system extracts 8 distinct features (3 based on retinal thickness profile of right side, 3 based on thickness profile of left side and 2 based on top surface and cyst spaces within retinal layers) from 30 labeled volumes (10 healthy, 10 CSR and 10 ME) which are used to train the supervised support vector machines (SVM) classifier.In this research we have considered 90 OCT volumes (30 Healthy, 30 CSR and 30 ME) of 73 patients to test the proposed system where our proposed system correctly classified 89 out of 90 cases and has promising receiver operator characteristics (ROC) ratings with accuracy, sensitivity and specificity of 98.88%, 100%, and 96.66% respectively.RESULTSIn this research we have considered 90 OCT volumes (30 Healthy, 30 CSR and 30 ME) of 73 patients to test the proposed system where our proposed system correctly classified 89 out of 90 cases and has promising receiver operator characteristics (ROC) ratings with accuracy, sensitivity and specificity of 98.88%, 100%, and 96.66% respectively.The proposed system is quite fast and robust in detecting all the three types of retinal pathologies from volumetric OCT scans. The proposed system is fully automated and provides an early and on fly diagnosis of ME and CSR syndromes. 3D macular thickness surfaces can further be used as decision support parameter in clinical studies to check the volume of cyst.CONCLUSIONThe proposed system is quite fast and robust in detecting all the three types of retinal pathologies from volumetric OCT scans. The proposed system is fully automated and provides an early and on fly diagnosis of ME and CSR syndromes. 3D macular thickness surfaces can further be used as decision support parameter in clinical studies to check the volume of cyst. Macular diseases tend to damage macula within human retina due to which the central vision of a person is affected. Macular edema (ME) and central serous retinopathy (CSR) are two of the most common macular diseases. Many researchers worked on automated detection of ME from optical coherence tomography (OCT) and fundus images, whereas few researchers have worked on diagnosing central serous retinopathy. But this paper proposes a fully automated method for the classification of ME and CSR through robust reconstruction of 3D OCT retinal surfaces. The proposed system uses structure tensors to extract retinal layers from OCT images. The 3D retinal surface is then reconstructed by extracting the brightness scan (B-scan) thickness profile from each coherent tensor. The proposed system extracts 8 distinct features (3 based on retinal thickness profile of right side, 3 based on thickness profile of left side and 2 based on top surface and cyst spaces within retinal layers) from 30 labeled volumes (10 healthy, 10 CSR and 10 ME) which are used to train the supervised support vector machines (SVM) classifier. In this research we have considered 90 OCT volumes (30 Healthy, 30 CSR and 30 ME) of 73 patients to test the proposed system where our proposed system correctly classified 89 out of 90 cases and has promising receiver operator characteristics (ROC) ratings with accuracy, sensitivity and specificity of 98.88%, 100%, and 96.66% respectively. The proposed system is quite fast and robust in detecting all the three types of retinal pathologies from volumetric OCT scans. The proposed system is fully automated and provides an early and on fly diagnosis of ME and CSR syndromes. 3D macular thickness surfaces can further be used as decision support parameter in clinical studies to check the volume of cyst.  | 
    
| Author | Naz, Samra Akram, M. Usman Khalid, Shehzad Syed, Adeel M. Hassan, Taimur  | 
    
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| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/28110716$$D View this record in MEDLINE/PubMed | 
    
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| Keywords | Structure tensor Central serous retinopathy (CSR) Optical coherence tomography Retinal surfaces Macular edema (ME) Medical image analysis central serous retinopathy (CSR) retinal surfaces macular edema (ME) medical image analysis structure tensor  | 
    
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| Snippet | •An automated method is proposed here to diagnose two common macular syndromes by reconstructing 3D retinal surfaces.•To the best of our knowledge, this paper... Highlights • This paper proposes a novel approach to automatically diagnose Macular Edema (ME), Central Serous Retinopathy (CSR) and healthy pathologies from... Macular diseases tend to damage macula within human retina due to which the central vision of a person is affected. Macular edema (ME) and central serous...  | 
    
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| SubjectTerms | Automation Central Serous Chorioretinopathy - diagnosis Central serous retinopathy (CSR) Humans Imaging, Three-Dimensional Internal Medicine Macular edema (ME) Macular Edema - diagnosis Medical image analysis Optical coherence tomography Other Retina - diagnostic imaging Retinal surfaces Structure tensor Support Vector Machine Tomography, Optical Coherence  | 
    
| Title | Automated diagnosis of macular edema and central serous retinopathy through robust reconstruction of 3D retinal surfaces | 
    
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