UCE data reveal multiple origins of rose gallers in North America: Global phylogeny of Diplolepis Geoffroy (Hymenoptera: Cynipidae)

[Display omitted] •First phylogenomic study of global rose gall wasps (Diplolepis), which employed UCEs.•Two main clades, one with Nearctic stem-galler, and other Holarctic leaf-galler taxa.•Historical biogeographic reconstruction confirms two independent incursions into the Nearctic.•Leaf galling i...

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Published inMolecular phylogenetics and evolution Vol. 153; p. 106949
Main Authors Zhang, Y. Miles, Buffington, Matthew L., Looney, Chris, László, Zoltán, Shorthouse, Joseph D., Ide, Tatsuya, Lucky, Andrea
Format Journal Article
LanguageEnglish
Published United States Elsevier Inc 01.12.2020
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Online AccessGet full text
ISSN1055-7903
1095-9513
1095-9513
DOI10.1016/j.ympev.2020.106949

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Abstract [Display omitted] •First phylogenomic study of global rose gall wasps (Diplolepis), which employed UCEs.•Two main clades, one with Nearctic stem-galler, and other Holarctic leaf-galler taxa.•Historical biogeographic reconstruction confirms two independent incursions into the Nearctic.•Leaf galling is the ancestral state, and shifts to other host organs are relatively rare. Gall wasps in the genus Diplolepis Geoffroy are specialized herbivores that induce galls exclusively on roses. Despite their wide distribution across the Holarctic, little is known about their evolutionary history. Here we present the first phylogenomic tree of global Diplolepis reconstructed using Ultraconserved Elements (UCEs), resulting in a robust phylogeny based on 757 genes. Results support the existence of two principal clades: a Nearctic stem-galler clade, and a Holarctic leaf-galler clade that further splits into two Palearctic groups and one Nearctic group. This topology is congruent with a previous study based on the mitochondrial gene COI, an unexpected result given the common occurrence of mitonuclear discordance in closely related oak gall wasp lineages. Most Diplolepis species were recovered as reciprocally monophyletic, with some notable exceptions such as the D. polita and the D. ignota complex, for which species boundaries remain unresolved. Historical biogeographic reconstruction was unable to pinpoint the origin of Diplolepis, but confirms two independent incursions into the Nearctic. Ancestral state reconstruction analysis highlights the conservatism of gall location on the host plants, as shifts to different host organs are relatively rare. We suggest that Diplolepis were originally leaf gallers, with a Nearctic stem-galler clade undergoing a major plant organ switch onto rose stems. Host organ switch or reversal is uncommon, which suggests a level of conservatism. Our study showcases the resolving power of UCEs at the species level while also suggesting improvements to advance future Cynipoidea phylogenomics. Our results also highlight the additional sampling needed to clarify taxonomic relationships in the Nearctic and eastern Palearctic regions.
AbstractList [Display omitted] •First phylogenomic study of global rose gall wasps (Diplolepis), which employed UCEs.•Two main clades, one with Nearctic stem-galler, and other Holarctic leaf-galler taxa.•Historical biogeographic reconstruction confirms two independent incursions into the Nearctic.•Leaf galling is the ancestral state, and shifts to other host organs are relatively rare. Gall wasps in the genus Diplolepis Geoffroy are specialized herbivores that induce galls exclusively on roses. Despite their wide distribution across the Holarctic, little is known about their evolutionary history. Here we present the first phylogenomic tree of global Diplolepis reconstructed using Ultraconserved Elements (UCEs), resulting in a robust phylogeny based on 757 genes. Results support the existence of two principal clades: a Nearctic stem-galler clade, and a Holarctic leaf-galler clade that further splits into two Palearctic groups and one Nearctic group. This topology is congruent with a previous study based on the mitochondrial gene COI, an unexpected result given the common occurrence of mitonuclear discordance in closely related oak gall wasp lineages. Most Diplolepis species were recovered as reciprocally monophyletic, with some notable exceptions such as the D. polita and the D. ignota complex, for which species boundaries remain unresolved. Historical biogeographic reconstruction was unable to pinpoint the origin of Diplolepis, but confirms two independent incursions into the Nearctic. Ancestral state reconstruction analysis highlights the conservatism of gall location on the host plants, as shifts to different host organs are relatively rare. We suggest that Diplolepis were originally leaf gallers, with a Nearctic stem-galler clade undergoing a major plant organ switch onto rose stems. Host organ switch or reversal is uncommon, which suggests a level of conservatism. Our study showcases the resolving power of UCEs at the species level while also suggesting improvements to advance future Cynipoidea phylogenomics. Our results also highlight the additional sampling needed to clarify taxonomic relationships in the Nearctic and eastern Palearctic regions.
Gall wasps in the genus Diplolepis Geoffroy are specialized herbivores that induce galls exclusively on roses. Despite their wide distribution across the Holarctic, little is known about their evolutionary history. Here we present the first phylogenomic tree of global Diplolepis reconstructed using Ultraconserved Elements (UCEs), resulting in a robust phylogeny based on 757 genes. Results support the existence of two principal clades: a Nearctic stem-galler clade, and a Holarctic leaf-galler clade that further splits into two Palearctic groups and one Nearctic group. This topology is congruent with a previous study based on the mitochondrial gene COI, an unexpected result given the common occurrence of mitonuclear discordance in closely related oak gall wasp lineages. Most Diplolepis species were recovered as reciprocally monophyletic, with some notable exceptions such as the D. polita and the D. ignota complex, for which species boundaries remain unresolved. Historical biogeographic reconstruction was unable to pinpoint the origin of Diplolepis, but confirms two independent incursions into the Nearctic. Ancestral state reconstruction analysis highlights the conservatism of gall location on the host plants, as shifts to different host organs are relatively rare. We suggest that Diplolepis were originally leaf gallers, with a Nearctic stem-galler clade undergoing a major plant organ switch onto rose stems. Host organ switch or reversal is uncommon, which suggests a level of conservatism. Our study showcases the resolving power of UCEs at the species level while also suggesting improvements to advance future Cynipoidea phylogenomics. Our results also highlight the additional sampling needed to clarify taxonomic relationships in the Nearctic and eastern Palearctic regions.Gall wasps in the genus Diplolepis Geoffroy are specialized herbivores that induce galls exclusively on roses. Despite their wide distribution across the Holarctic, little is known about their evolutionary history. Here we present the first phylogenomic tree of global Diplolepis reconstructed using Ultraconserved Elements (UCEs), resulting in a robust phylogeny based on 757 genes. Results support the existence of two principal clades: a Nearctic stem-galler clade, and a Holarctic leaf-galler clade that further splits into two Palearctic groups and one Nearctic group. This topology is congruent with a previous study based on the mitochondrial gene COI, an unexpected result given the common occurrence of mitonuclear discordance in closely related oak gall wasp lineages. Most Diplolepis species were recovered as reciprocally monophyletic, with some notable exceptions such as the D. polita and the D. ignota complex, for which species boundaries remain unresolved. Historical biogeographic reconstruction was unable to pinpoint the origin of Diplolepis, but confirms two independent incursions into the Nearctic. Ancestral state reconstruction analysis highlights the conservatism of gall location on the host plants, as shifts to different host organs are relatively rare. We suggest that Diplolepis were originally leaf gallers, with a Nearctic stem-galler clade undergoing a major plant organ switch onto rose stems. Host organ switch or reversal is uncommon, which suggests a level of conservatism. Our study showcases the resolving power of UCEs at the species level while also suggesting improvements to advance future Cynipoidea phylogenomics. Our results also highlight the additional sampling needed to clarify taxonomic relationships in the Nearctic and eastern Palearctic regions.
Gall wasps in the genus Diplolepis Geoffroy are specialized herbivores that induce galls exclusively on roses. Despite their wide distribution across the Holarctic, little is known about their evolutionary history. Here we present the first phylogenomic tree of global Diplolepis reconstructed using Ultraconserved Elements (UCEs), resulting in a robust phylogeny based on 757 genes. Results support the existence of two principal clades: a Nearctic stem-galler clade, and a Holarctic leaf-galler clade that further splits into two Palearctic groups and one Nearctic group. This topology is congruent with a previous study based on the mitochondrial gene COI, an unexpected result given the common occurrence of mitonuclear discordance in closely related oak gall wasp lineages. Most Diplolepis species were recovered as reciprocally monophyletic, with some notable exceptions such as the D. polita and the D. ignota complex, for which species boundaries remain unresolved. Historical biogeographic reconstruction was unable to pinpoint the origin of Diplolepis, but confirms two independent incursions into the Nearctic. Ancestral state reconstruction analysis highlights the conservatism of gall location on the host plants, as shifts to different host organs are relatively rare. We suggest that Diplolepis were originally leaf gallers, with a Nearctic stem-galler clade undergoing a major plant organ switch onto rose stems. Host organ switch or reversal is uncommon, which suggests a level of conservatism. Our study showcases the resolving power of UCEs at the species level while also suggesting improvements to advance future Cynipoidea phylogenomics. Our results also highlight the additional sampling needed to clarify taxonomic relationships in the Nearctic and eastern Palearctic regions.
ArticleNumber 106949
Author Buffington, Matthew L.
Shorthouse, Joseph D.
Lucky, Andrea
Ide, Tatsuya
Zhang, Y. Miles
László, Zoltán
Looney, Chris
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  givenname: Andrea
  surname: Lucky
  fullname: Lucky, Andrea
  organization: Entomology and Nematology Department, University of Florida, Gainesville, FL 32611, United States
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Cites_doi 10.1089/cmb.2012.0021
10.1080/00305316.2007.10417504
10.7717/peerj.7755
10.3897/jhr.61.13466
10.1038/nmeth.4285
10.1007/s12600-019-00740-3
10.4039/tce.2013.70
10.1073/pnas.0803076105
10.1111/1755-0998.13006
10.1186/1471-2148-10-174
10.1371/journal.pone.0161531
10.1093/molbev/msw079
10.1093/molbev/msx281
10.1111/2041-210X.12742
10.1111/1755-0998.12328
10.1016/S0169-5347(03)00247-7
10.1086/689399
10.1093/oxfordjournals.molbev.a026334
10.1111/mec.14372
10.1371/journal.pbio.1000179
10.4289/0013-8797-110.1.204
10.21425/F5FBG19694
10.1093/molbev/msaa015
10.1093/bioinformatics/btv646
10.11646/zootaxa.1301.1.1
10.1017/S1755691014000103
10.1111/2041-210X.12988
10.1002/0471142905.hg1804s66
10.1111/jbi.13173
10.1016/S1055-7903(02)00329-9
10.1146/annurev.ento.47.091201.145247
10.1080/10635150390192780
10.1016/j.baae.2005.07.006
10.1093/isd/ixz016
10.1186/s12859-018-2129-y
10.1017/S0007485312000764
10.1101/gr.128124.111
10.1093/aob/mcu245
10.1371/journal.pgen.1008398
10.1093/molbev/msy069
10.1093/molbev/msz257
10.1111/2041-210X.12628
10.1016/j.baae.2005.07.003
10.4039/tce.2019.59
10.1098/rspb.1998.0387
10.1098/rspb.1998.0401
10.3897/zookeys.904.46547
10.17112/FoliaEntHung.2019.80.231
10.7717/peerj.1660
10.1046/j.1365-2583.1999.820185.x
10.1111/j.2041-210X.2011.00169.x
10.1111/j.1365-294X.2012.05683.x
10.1111/1755-0998.13072
10.1093/sysbio/syu056
10.1046/j.1365-3113.1998.00053.x
10.21105/joss.01635
10.1111/j.0014-3820.2002.tb00196.x
10.1093/sysbio/syq010
10.1046/j.1365-2540.1998.00385.x
10.1093/molbev/msz240
10.1371/journal.pone.0123301
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Keywords Biogeography
Ancestral state reconstruction
Ultraconserved elements
Target capture
Phylogenomic
Gall wasp
Language English
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References Castresana (b0080) 2000; 17
Faircloth (b0110) 2015; 32
Liljeblad, Ronquist (b0185) 1998; 23
Stone, Schönrogge (b0340) 2003; 18
Schilthuizen, Stouthamer (b0300) 1998; 81
Zhang, Gates, Shorthouse (b0395) 2014; 146
Bailey, Schonrogge, Cook, Melika, Csoka, Thuroczy, Stone (b0020) 2009; 7
Derkarabetian, Benavides, Giribet (b0105) 2019; 19
Yu, Smith, Zhu, Guan, Lam (b0380) 2017; 8
Beutenmüller (b0035) 1907; 23
Blaimer, Lloyd, Guillory, Brady (b0040) 2016; 11
Stone, G.N., Cook, J.M., 1998. The structure of cynipid oak galls patterns in the evolution of an extended phenotype. Proc. Royal Soc. London B: Biol. Sci. 265, 979–988.
Nicholls, Challis, Mutun, Stone (b0230) 2012; 21
Plantard, O., Shorthouse, J.D., Rasplus, J.-Y., 1998b. Molecular phylogeny of the genus Diplolepis (Hymenoptera: Cynipidae). In: Csóka G, Mattson W.J, Stone G, P.W, P. (Eds.), The Biology of Gall-Inducing Arthropods. United States Department of Agriculture Forest Service General Technical Report NC-199, St. Paul, MN, USA, pp. 247-260.
Bossert, Danforth (b0060) 2018; 9
Burks (b0075) 1979
László, Tóthmérész (b0180) 2013; 103
Revell (b0275) 2012; 3
Borowiec (b0050) 2019; 4
Belizin (b0030) 1957; 36
Melika (b0210) 2006; 1–2
Pujade-Villar, Wang, Zhang, Mata-Casanova, Lobato-Vila, Dénes, László (b0260) 2020; 904
R Core Team, 2020. R: A language and environment for statistical computing.
Askew, Plantard, Gomez, Nieves, Nieves-Aldrey (b0015) 2006; 1301
Zhang, Rabiee, Sayyari, Mirarab (b0390) 2018; 19
Borowiec (b0055) 2016; 4
Brooks, Shorthouse (b0070) 1998; 76
Huelsenbeck, Nielsen, Bollback (b0160) 2003; 52
Guindon, Dufayard, Lefort, Anisimova, Hordijk, Gascuel (b0140) 2010; 59
Magnacca, Brown (b0195) 2010; 10
Vyrzhikovskaja (b0360) 1963; 42
Zhang, Gates, Shorthouse (b0400) 2017; 61
Bankevich, Nurk, Antipov, Gurevich, Dvorkin, Kulikov, Lesin, Nikolenko, Pham, Prjibelski (b0025) 2012; 19
Field, James, Plantard, Rasplus, Mondor, Le Clainche, Solignac (b0120) 1999; 8
Glenn, Nilsen, Kieran, Sanders, Bayona-Vásquez, Finger, Pierson, Bentley, Hoffberg, Louha, Garcia-De Leon, del Rio Portilla, Reed, Anderson, Meece, Aggrey, Rekaya, Alabady, Belanger, Winker, Faircloth (b0130) 2019; 7
Minh, Hahn, Lanfear (b0220) 2020
Hoang, Chernomor, von Haeseler, Minh, Le (b0155) 2017; 35
Fougere-Danezan, Joly, Bruneau, Gao, Zhang (b0125) 2015; 115
Yu, Blair, He (b0385) 2020; 37
Cruaud, Nidelet, Arnal, Weber, Fusu, Gumovsky, Huber, Polaszek, Rasplus (b0095) 2019; 19
Pujade-Villar, Plantard (b0255) 2002
Shorthouse, Leggo, Sliva, Lalonde (b0320) 2005; 6
Rokas, Melika, Abe, Nieves-Aldrey, Cook, Stone (b0280) 2003; 26
Song, Buhay, Whiting, Crandall (b0330) 2008; 105
Xiang, Huang, Hu, Wen, Li, Yi, Chen, Xiang, Ma (b0375) 2017; 34
Hayward, Stone (b0145) 2005; 6
Ronquist, Liljeblad (b0285) 2001; 55
Shorthouse, Rohfritsch (b0325) 1992
Wang, Lam, Xu, Dai, Zhou, Feng, Guo, Dunn, Jones, Bradley (b0365) 2020; 37
Shorthouse (b0305) 1980; 127
Stone, Schönrogge, Atkinson, Bellido, Pujade-Villar (b0345) 2002; 47
Ree, Sanmartín (b0270) 2018; 45
Hearn, Blaxter, Schonrogge, Nieves-Aldrey, Pujade-Villar, Huguet, Drezen, Shorthouse, Stone (b0150) 2019; 15
Minh, Schmidt, Chernomor, Schrempf, Woodhams, Von Haeseler, Lanfear (b0225) 2020; 37
Tagliacollo, Lanfear (b0355) 2018; 35
Antropov, Belokobylskij, Compton, Dlussky, Khalaim, Kolyada, Kozlov, Perfilieva, Rasnitsyn (b0010) 2014; 104
Zhang, László, Looney, Dénes, Hanner, Shorthouse (b0405) 2019; 151
Ronquist, Nieves-Aldrey, Buffington, Liu, Liljeblad, Nylander (b0290) 2015; 10
Shorthouse (b0315) 2010
Pujade-Villar, Peñalver (b0250) 2019; 75
Sayyari, Mirarab (b0295) 2016; 33
Kalyaanamoorthy, Minh, Wong, von Haeseler, Jermiin (b0165) 2017; 14
Mete, Lotfalizadeh (b0215) 2019; 47
Lanfear, Frandsen, Wright, Senfeld, Calcott (b0170) 2016; 34
Nicholls, Melika, Stone (b0235) 2017; 189
Plantard, Rasplus, Mondor, Clainche, Solignac (b0240) 1998; 265
Lotfalizadeh, Rasplus, Delvare (b0190) 2006; 89
Shorthouse, J.D., 1998. Role of Periclistus (Hymenoptera: Cynipidae) inquilines in leaf galls of Diplolepis (Hymenoptera: Cynipidae) on wild roses in Canada. In: Csóka, G., Mattison, W.J., Stone, G.N., Price, P.W. (Eds.), The Biology of Gall-Inducing Arthropods. USA Department of Agriculture, Forest Service, North Central Research Station, St. Paul, MN, USA, pp. 61–81.
Abe, Melika, Stone (b0005) 2007; 41
Branstetter, Longino, Ward, Faircloth, Price (b0065) 2017; 8
Matzke, N.J., 2013. Probabilistic historical biogeography: new models for founder-event speciation, imperfect detection, and fossils allow improved accuracy and model-testing. Frontiers of Biogeography 5.
Chen, Li, Cheng, Zhang, Liu, Wu, Yang, Wang, Zhou (b0085) 2020
Wang, Guo, Liu, Chen (b0370) 2013; 38
Zhang, Williams, Lucky (b0410) 2019; 3
Csóka, G., Stone, G., Melika, G., 2005. Biology, ecology, and evolution of gall-inducing Cynipidae. In: Raman, A., Schaefer, C.W., Withers, T.M. (Eds.), Biology, Ecology, and Evolution of Gall-inducing Arthropods. Enfield, Science Publishers, NH, USA, pp. 573–642.
Matzke (b0205) 2014; 63
Cook, Rokas, Pagel, Stone (b0090) 2002; 56
Faircloth, Branstetter, White, Brady (b0115) 2015; 15
Stone, White, Csóka, Melika, Mutun, Penzes, Sadeghi, Schönrogge, Tavakoli, Nicholls (b0350) 2017; 26
László, Prázsmári (b0175) 2019; 80
Blumenstiel, B., Cibulskis, K., Fisher, S., DeFelice, M., Barry, A., Fennell, T., Abreu, J., Minie, B., Costello, M., Young, G., 2010. Targeted exon sequencing by in‐solution hybrid selection. Current Protocols in Human Genetics 66, 18.14. 11-18.14. 24.
Güçlü, Hayat, Shorthouse, Tozlu (b0135) 2008; 110
Rohland, Reich (bib411) 2012; 22
Stone (10.1016/j.ympev.2020.106949_b0350) 2017; 26
Chen (10.1016/j.ympev.2020.106949_b0085) 2020
Stone (10.1016/j.ympev.2020.106949_b0340) 2003; 18
Güçlü (10.1016/j.ympev.2020.106949_b0135) 2008; 110
Ronquist (10.1016/j.ympev.2020.106949_b0285) 2001; 55
10.1016/j.ympev.2020.106949_b0310
Pujade-Villar (10.1016/j.ympev.2020.106949_b0260) 2020; 904
Antropov (10.1016/j.ympev.2020.106949_b0010) 2014; 104
Guindon (10.1016/j.ympev.2020.106949_b0140) 2010; 59
Liljeblad (10.1016/j.ympev.2020.106949_b0185) 1998; 23
Askew (10.1016/j.ympev.2020.106949_b0015) 2006; 1301
Kalyaanamoorthy (10.1016/j.ympev.2020.106949_b0165) 2017; 14
Nicholls (10.1016/j.ympev.2020.106949_b0230) 2012; 21
Ronquist (10.1016/j.ympev.2020.106949_b0290) 2015; 10
Shorthouse (10.1016/j.ympev.2020.106949_b0325) 1992
Bailey (10.1016/j.ympev.2020.106949_b0020) 2009; 7
Field (10.1016/j.ympev.2020.106949_b0120) 1999; 8
Shorthouse (10.1016/j.ympev.2020.106949_b0320) 2005; 6
Ree (10.1016/j.ympev.2020.106949_b0270) 2018; 45
Yu (10.1016/j.ympev.2020.106949_b0380) 2017; 8
Song (10.1016/j.ympev.2020.106949_b0330) 2008; 105
Beutenmüller (10.1016/j.ympev.2020.106949_b0035) 1907; 23
Brooks (10.1016/j.ympev.2020.106949_b0070) 1998; 76
Wang (10.1016/j.ympev.2020.106949_b0365) 2020; 37
Bankevich (10.1016/j.ympev.2020.106949_b0025) 2012; 19
Xiang (10.1016/j.ympev.2020.106949_b0375) 2017; 34
Mete (10.1016/j.ympev.2020.106949_b0215) 2019; 47
Melika (10.1016/j.ympev.2020.106949_b0210) 2006; 1–2
10.1016/j.ympev.2020.106949_b0245
10.1016/j.ympev.2020.106949_b0045
10.1016/j.ympev.2020.106949_b0200
Schilthuizen (10.1016/j.ympev.2020.106949_b0300) 1998; 81
László (10.1016/j.ympev.2020.106949_b0180) 2013; 103
Borowiec (10.1016/j.ympev.2020.106949_b0050) 2019; 4
Hayward (10.1016/j.ympev.2020.106949_b0145) 2005; 6
Vyrzhikovskaja (10.1016/j.ympev.2020.106949_b0360) 1963; 42
Castresana (10.1016/j.ympev.2020.106949_b0080) 2000; 17
Pujade-Villar (10.1016/j.ympev.2020.106949_b0255) 2002
László (10.1016/j.ympev.2020.106949_b0175) 2019; 80
Nicholls (10.1016/j.ympev.2020.106949_b0235) 2017; 189
Faircloth (10.1016/j.ympev.2020.106949_b0115) 2015; 15
Sayyari (10.1016/j.ympev.2020.106949_b0295) 2016; 33
Borowiec (10.1016/j.ympev.2020.106949_b0055) 2016; 4
Faircloth (10.1016/j.ympev.2020.106949_b0110) 2015; 32
Hoang (10.1016/j.ympev.2020.106949_b0155) 2017; 35
Tagliacollo (10.1016/j.ympev.2020.106949_b0355) 2018; 35
Derkarabetian (10.1016/j.ympev.2020.106949_b0105) 2019; 19
Belizin (10.1016/j.ympev.2020.106949_b0030) 1957; 36
Revell (10.1016/j.ympev.2020.106949_b0275) 2012; 3
Cruaud (10.1016/j.ympev.2020.106949_b0095) 2019; 19
Lotfalizadeh (10.1016/j.ympev.2020.106949_b0190) 2006; 89
Blaimer (10.1016/j.ympev.2020.106949_b0040) 2016; 11
Rokas (10.1016/j.ympev.2020.106949_b0280) 2003; 26
Glenn (10.1016/j.ympev.2020.106949_b0130) 2019; 7
Matzke (10.1016/j.ympev.2020.106949_b0205) 2014; 63
Pujade-Villar (10.1016/j.ympev.2020.106949_b0250) 2019; 75
Stone (10.1016/j.ympev.2020.106949_b0345) 2002; 47
Branstetter (10.1016/j.ympev.2020.106949_b0065) 2017; 8
Fougere-Danezan (10.1016/j.ympev.2020.106949_b0125) 2015; 115
Hearn (10.1016/j.ympev.2020.106949_b0150) 2019; 15
Zhang (10.1016/j.ympev.2020.106949_b0400) 2017; 61
Zhang (10.1016/j.ympev.2020.106949_b0395) 2014; 146
Zhang (10.1016/j.ympev.2020.106949_b0405) 2019; 151
10.1016/j.ympev.2020.106949_b0100
10.1016/j.ympev.2020.106949_b0265
Abe (10.1016/j.ympev.2020.106949_b0005) 2007; 41
Burks (10.1016/j.ympev.2020.106949_b0075) 1979
Magnacca (10.1016/j.ympev.2020.106949_b0195) 2010; 10
Shorthouse (10.1016/j.ympev.2020.106949_b0305) 1980; 127
Zhang (10.1016/j.ympev.2020.106949_b0410) 2019; 3
Minh (10.1016/j.ympev.2020.106949_b0220) 2020
Rohland (10.1016/j.ympev.2020.106949_bib411) 2012; 22
Minh (10.1016/j.ympev.2020.106949_b0225) 2020; 37
Plantard (10.1016/j.ympev.2020.106949_b0240) 1998; 265
Shorthouse (10.1016/j.ympev.2020.106949_b0315) 2010
Wang (10.1016/j.ympev.2020.106949_b0370) 2013; 38
Lanfear (10.1016/j.ympev.2020.106949_b0170) 2016; 34
Bossert (10.1016/j.ympev.2020.106949_b0060) 2018; 9
10.1016/j.ympev.2020.106949_b0335
Cook (10.1016/j.ympev.2020.106949_b0090) 2002; 56
Zhang (10.1016/j.ympev.2020.106949_b0390) 2018; 19
Huelsenbeck (10.1016/j.ympev.2020.106949_b0160) 2003; 52
Yu (10.1016/j.ympev.2020.106949_b0385) 2020; 37
References_xml – volume: 76
  start-page: 365
  year: 1998
  end-page: 381
  ident: b0070
  article-title: Developmental morphology of stem galls of
  publication-title: Can. J. Bot.
– volume: 8
  start-page: 185
  year: 1999
  end-page: 191
  ident: b0120
  article-title: Distribution and phylogeny of
  publication-title: Insect Mol. Biol.
– volume: 22
  start-page: 939
  year: 2012
  end-page: 946
  ident: bib411
  article-title: Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture
  publication-title: Genome Res.
– volume: 1301
  start-page: 1
  year: 2006
  end-page: 60
  ident: b0015
  article-title: Catalogue of parasitoids and inquilines in galls of Aylacini, Diplolepidini and Pediaspidini (Hym., Cynipidae) in the West Palaearctic
  publication-title: Zootaxa
– volume: 89
  start-page: 73
  year: 2006
  end-page: 85
  ident: b0190
  article-title: Rose gall wasps and their associated fauna (Hymenoptera) in Iran
  publication-title: Redia
– reference: Matzke, N.J., 2013. Probabilistic historical biogeography: new models for founder-event speciation, imperfect detection, and fossils allow improved accuracy and model-testing. Frontiers of Biogeography 5.
– volume: 37
  start-page: 604
  year: 2020
  end-page: 606
  ident: b0385
  article-title: RASP 4: ancestral state reconstruction tool for multiple genes and characters
  publication-title: Mol. Biol. Evol.
– volume: 115
  start-page: 275
  year: 2015
  end-page: 291
  ident: b0125
  article-title: Phylogeny and biogeography of wild roses with specific attention to polyploids
  publication-title: Ann. Bot.
– volume: 4
  start-page: 1635
  year: 2019
  ident: b0050
  article-title: Spruceup: fast and flexible identification, visualization, and removal of outliers from large multiple sequence alignments
  publication-title: J. Open Source Software
– reference: Shorthouse, J.D., 1998. Role of Periclistus (Hymenoptera: Cynipidae) inquilines in leaf galls of Diplolepis (Hymenoptera: Cynipidae) on wild roses in Canada. In: Csóka, G., Mattison, W.J., Stone, G.N., Price, P.W. (Eds.), The Biology of Gall-Inducing Arthropods. USA Department of Agriculture, Forest Service, North Central Research Station, St. Paul, MN, USA, pp. 61–81.
– reference: Plantard, O., Shorthouse, J.D., Rasplus, J.-Y., 1998b. Molecular phylogeny of the genus Diplolepis (Hymenoptera: Cynipidae). In: Csóka G, Mattson W.J, Stone G, P.W, P. (Eds.), The Biology of Gall-Inducing Arthropods. United States Department of Agriculture Forest Service General Technical Report NC-199, St. Paul, MN, USA, pp. 247-260.
– volume: 11
  start-page: e0161531
  year: 2016
  ident: b0040
  article-title: Sequence capture and phylogenetic utility of genomic ultraconserved elements obtained from pinned insect specimens
  publication-title: PLoS ONE
– volume: 19
  start-page: 1531
  year: 2019
  end-page: 1544
  ident: b0105
  article-title: Sequence capture phylogenomics of historical ethanol-preserved museum specimens: Unlocking the rest of the vault
  publication-title: Mol. Ecol. Resour.
– volume: 127
  start-page: 79
  year: 1980
  end-page: 84
  ident: b0305
  article-title: Modification of galls of
  publication-title: Actualités Botaniques
– volume: 23
  start-page: 629
  year: 1907
  end-page: 651
  ident: b0035
  article-title: The North American species of
  publication-title: Bull. Am. Museum Natural History
– volume: 35
  start-page: 1798
  year: 2018
  end-page: 1811
  ident: b0355
  article-title: Estimating improved partitioning schemes for ultraconserved elements
  publication-title: Mol. Biol. Evol.
– volume: 151
  start-page: 717
  year: 2019
  end-page: 727
  ident: b0405
  article-title: DNA barcodes reveal inconsistent species boundaries in
  publication-title: Can. Entomol.
– reference: R Core Team, 2020. R: A language and environment for statistical computing.
– reference: Csóka, G., Stone, G., Melika, G., 2005. Biology, ecology, and evolution of gall-inducing Cynipidae. In: Raman, A., Schaefer, C.W., Withers, T.M. (Eds.), Biology, Ecology, and Evolution of Gall-inducing Arthropods. Enfield, Science Publishers, NH, USA, pp. 573–642.
– volume: 80
  start-page: 231
  year: 2019
  end-page: 235
  ident: b0175
  article-title: Parasitoid community and parasitism in galls of the three Western Palaearctic oligo-and unilocular
  publication-title: Folia Entomologica Hungarica
– volume: 37
  start-page: 1530
  year: 2020
  end-page: 1534
  ident: b0225
  article-title: IQ-TREE 2: New models and efficient methods for phylogenetic inference in the genomic era
  publication-title: Mol. Biol. Evol.
– volume: 17
  start-page: 540
  year: 2000
  end-page: 552
  ident: b0080
  article-title: Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
  publication-title: Mol. Biol. Evol.
– volume: 75
  start-page: e091
  year: 2019
  ident: b0250
  article-title: Revision of the fossil figitid wasps (Insecta: Hymenoptera: Cynipoidea) described from compression deposits during the first half of the 20th century
  publication-title: Estud. Geol.
– volume: 10
  start-page: e0123301
  year: 2015
  ident: b0290
  article-title: Phylogeny, evolution and classification of gall wasps: the plot thickens
  publication-title: PLoS ONE
– volume: 47
  start-page: 361
  year: 2019
  end-page: 374
  ident: b0215
  article-title: Parasitoid wasps associated with
  publication-title: Phytoparasitica
– volume: 8
  start-page: 768
  year: 2017
  end-page: 776
  ident: b0065
  article-title: Enriching the ant tree of life: enhanced UCE bait set for genome-scale phylogenetics of ants and other Hymenoptera
  publication-title: Methods Ecol. Evol.
– volume: 38
  start-page: 317
  year: 2013
  end-page: 327
  ident: b0370
  article-title: Taxonomic study of the genus
  publication-title: Acta Zootaxonomica Sinica
– volume: 104
  start-page: 335
  year: 2014
  end-page: 446
  ident: b0010
  article-title: The wasps, bees and ants (Insecta: Vespida= Hymenoptera) from the insect limestone (Late Eocene) of the Isle of Wight, UK
  publication-title: Earth Environ. Sci. Trans. Royal Soc. Edinburgh
– volume: 7
  start-page: e7755
  year: 2019
  ident: b0130
  article-title: Adapterama I: universal stubs and primers for 384 unique dual-indexed or 147,456 combinatorially-indexed Illumina libraries (iTru & iNext)
  publication-title: PeerJ
– volume: 19
  start-page: 455
  year: 2012
  end-page: 477
  ident: b0025
  article-title: SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing
  publication-title: J. Comput. Biol.
– volume: 81
  start-page: 270
  year: 1998
  end-page: 274
  ident: b0300
  article-title: Distribution of
  publication-title: Heredity
– volume: 1–2
  start-page: 1
  year: 2006
  end-page: 644
  ident: b0210
  article-title: Gall wasps of Ukraine
  publication-title: Cynipidae. Vestnik Zoologii
– volume: 904
  start-page: 131
  year: 2020
  end-page: 146
  ident: b0260
  article-title: A new
  publication-title: ZooKeys
– volume: 15
  year: 2019
  ident: b0150
  article-title: Genomic dissection of an extended phenotype: Oak galling by a cynipid gall wasp
  publication-title: PLoS Genet.
– reference: Stone, G.N., Cook, J.M., 1998. The structure of cynipid oak galls patterns in the evolution of an extended phenotype. Proc. Royal Soc. London B: Biol. Sci. 265, 979–988.
– volume: 8
  start-page: 28
  year: 2017
  end-page: 36
  ident: b0380
  article-title: ggtree: an R package for visualization and annotation of phylogenetic trees with their covariates and other associated data
  publication-title: Methods Ecol. Evol.
– volume: 52
  start-page: 131
  year: 2003
  end-page: 158
  ident: b0160
  article-title: Stochastic mapping of morphological characters
  publication-title: Syst. Biol.
– volume: 146
  start-page: 321
  year: 2014
  end-page: 334
  ident: b0395
  article-title: Testing species limits of Eurytomidae (Hymenoptera) associated with galls induced by
  publication-title: Can. Entomol.
– volume: 55
  start-page: 2503
  year: 2001
  end-page: 2522
  ident: b0285
  article-title: Evolution of the gall wasp-host plant association
  publication-title: Evolution
– volume: 3
  start-page: 217
  year: 2012
  end-page: 223
  ident: b0275
  article-title: phytools: an R package for phylogenetic comparative biology (and other things)
  publication-title: Methods Ecol. Evol.
– start-page: 1045
  year: 1979
  end-page: 1107
  ident: b0075
  article-title: Superfamily Cynipoidea
  publication-title: Catalog of Hymenoptera in America north of Mexico
– volume: 21
  start-page: 4051
  year: 2012
  end-page: 4062
  ident: b0230
  article-title: Mitochondrial barcodes are diagnostic of shared refugia but not species in hybridizing oak gallwasps
  publication-title: Mol. Ecol.
– volume: 61
  start-page: 1
  year: 2017
  end-page: 29
  ident: b0400
  article-title: Revision of Canadian Eurytomidae (Hymenoptera, Chalcidoidea) associated with galls induced by cynipid wasps of the genus
  publication-title: J. Hymenoptera Res.
– volume: 19
  start-page: 702
  year: 2019
  end-page: 710
  ident: b0095
  article-title: Optimized DNA extraction and library preparation for minute arthropods: application to target enrichment in chalcid wasps used for biocontrol
  publication-title: Mol. Ecol. Resour.
– volume: 26
  start-page: 6685
  year: 2017
  end-page: 6703
  ident: b0350
  article-title: Tournament ABC analysis of the western Palaearctic population history of an oak gall wasp, Synergus umbraculus
  publication-title: Mol. Ecol.
– start-page: 135
  year: 2002
  end-page: 142
  ident: b0255
  article-title: About the validity of
  publication-title: Parasitic wasps: Evolution, Systematics, Biodiversity and Biological Control
– volume: 36
  start-page: 925
  year: 1957
  end-page: 934
  ident: b0030
  article-title: Gall wasps (Hymenoptera: Cynipidae) in the USSR fauna developed on roses
  publication-title: Entomologicheskoe Obozrenie
– volume: 41
  start-page: 169
  year: 2007
  end-page: 212
  ident: b0005
  article-title: The diversity and phylogeography of cynipid gallwasps (Hymenoptera: Cynipidae) of the Oriental and Eastern Palearctic regions, and their associated communities
  publication-title: Oriental Insects
– volume: 45
  start-page: 741
  year: 2018
  end-page: 749
  ident: b0270
  article-title: Conceptual and statistical problems with the DEC+ J model of founder-event speciation and its comparison with DEC via model selection
  publication-title: J. Biogeogr.
– year: 2020
  ident: b0085
  article-title: Molecular systematics of Rosoideae (Rosaceae)
  publication-title: Plant Systematics and Evolution 306
– volume: 110
  start-page: 204
  year: 2008
  end-page: 217
  ident: b0135
  article-title: Gall-inducing wasps of the genus
  publication-title: Proc. Entomol. Soc. Wash.
– volume: 32
  start-page: 786
  year: 2015
  end-page: 788
  ident: b0110
  article-title: PHYLUCE is a software package for the analysis of conserved genomic loci
  publication-title: Bioinformatics
– volume: 15
  start-page: 489
  year: 2015
  end-page: 501
  ident: b0115
  article-title: Target enrichment of ultraconserved elements from arthropods provides a genomic perspective on relationships among Hymenoptera
  publication-title: Mol. Ecol. Resour.
– volume: 37
  start-page: 599
  year: 2020
  end-page: 603
  ident: b0365
  article-title: treeio: an R package for phylogenetic tree input and output with richly annotated and associated data
  publication-title: Mol. Biol. Evol.
– reference: Blumenstiel, B., Cibulskis, K., Fisher, S., DeFelice, M., Barry, A., Fennell, T., Abreu, J., Minie, B., Costello, M., Young, G., 2010. Targeted exon sequencing by in‐solution hybrid selection. Current Protocols in Human Genetics 66, 18.14. 11-18.14. 24.
– volume: 7
  start-page: e1000179
  year: 2009
  ident: b0020
  article-title: Host niches and defensive extended phenotypes structure parasitoid wasp communities
  publication-title: PLoS Biol.
– volume: 19
  start-page: 153
  year: 2018
  ident: b0390
  article-title: ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees
  publication-title: BMC Bioinf.
– volume: 56
  start-page: 1821
  year: 2002
  end-page: 1830
  ident: b0090
  article-title: Evolutionary shifts between host oak sections and host-plant organs in
  publication-title: Evolution
– start-page: msaa106
  year: 2020
  ident: b0220
  article-title: New methods to calculate concordance factors for phylogenomic datasets
  publication-title: Mol. Biol. Evol.
– volume: 105
  start-page: 13486
  year: 2008
  end-page: 13491
  ident: b0330
  article-title: Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified
  publication-title: PNAS
– volume: 4
  start-page: e1660
  year: 2016
  ident: b0055
  article-title: AMAS: a fast tool for alignment manipulation and computing of summary statistics
  publication-title: PeerJ
– volume: 34
  start-page: 772
  year: 2016
  end-page: 773
  ident: b0170
  article-title: PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses
  publication-title: Mol. Biol. Evol.
– volume: 14
  start-page: 587
  year: 2017
  ident: b0165
  article-title: ModelFinder: fast model selection for accurate phylogenetic estimates
  publication-title: Nat. Methods
– year: 1992
  ident: b0325
  article-title: Biology of Insect-induced Galls
– volume: 59
  start-page: 307
  year: 2010
  end-page: 321
  ident: b0140
  article-title: New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0
  publication-title: Syst. Biol.
– volume: 35
  start-page: 518
  year: 2017
  end-page: 522
  ident: b0155
  article-title: UFBoot2: Improving the ultrafast bootstrap approximation
  publication-title: Mol. Biol. Evol.
– volume: 265
  start-page: 1075
  year: 1998
  end-page: 1080
  ident: b0240
  article-title: Wolbachia–induced thelytoky in the rose gallwasp
  publication-title: Proc. R. Soc. Lond. B Biol. Sci.
– volume: 10
  start-page: 174
  year: 2010
  ident: b0195
  article-title: Mitochondrial heteroplasmy and DNA barcoding in Hawaiian
  publication-title: BMC Evol. Biol.
– volume: 9
  start-page: 1453
  year: 2018
  end-page: 1460
  ident: b0060
  article-title: On the universality of target-enrichment baits for phylogenomic research
  publication-title: Methods Ecol. Evol.
– volume: 189
  start-page: 67
  year: 2017
  end-page: 77
  ident: b0235
  article-title: Sweet tetra-trophic interactions: multiple evolution of nectar secretion, a defensive extended phenotype in cynipid gall wasps
  publication-title: Am. Nat.
– volume: 23
  start-page: 229
  year: 1998
  end-page: 252
  ident: b0185
  article-title: A phylogenetic analysis of higher-level gall wasp relationships (Hymenoptera: Cynipidae)
  publication-title: Syst. Entomol.
– volume: 63
  start-page: 951
  year: 2014
  end-page: 970
  ident: b0205
  article-title: Model selection in historical biogeography reveals that founder-event speciation is a crucial process in island clades
  publication-title: Syst. Biol.
– volume: 103
  start-page: 326
  year: 2013
  end-page: 335
  ident: b0180
  article-title: The enemy hypothesis: correlates of gall morphology with parasitoid attack rates in two closely related rose cynipid galls
  publication-title: Bull. Entomol. Res.
– volume: 3
  start-page: 3
  year: 2019
  ident: b0410
  article-title: Understanding UCEs: a comprehensive primer on using ultraconserved elements for arthropod phylogenomics
  publication-title: Insect Syst. Diver.
– volume: 6
  start-page: 435
  year: 2005
  end-page: 443
  ident: b0145
  article-title: Oak gall wasp communities: evolution and ecology
  publication-title: Basic Appl. Ecol.
– volume: 6
  start-page: 423
  year: 2005
  end-page: 434
  ident: b0320
  article-title: Has egg location influenced the radiation of Diplolepis (Hymenoptera: Cynipidae) gall wasps on wild roses?
  publication-title: Basic Appl. Ecol.
– start-page: 251
  year: 2010
  end-page: 279
  ident: b0315
  article-title: Galls induced by cynipid wasps of the genus
  publication-title: Arthropods of the Canadian Grasslands
– volume: 18
  start-page: 512
  year: 2003
  end-page: 522
  ident: b0340
  article-title: The adaptive significance of insect gall morphology
  publication-title: Trends Ecol. Evol.
– volume: 34
  start-page: 262
  year: 2017
  end-page: 281
  ident: b0375
  article-title: Evolution of rosaceae fruit types based on nuclear phylogeny in the context of geological times and genome duplication
  publication-title: Mol. Biol. Evol.
– volume: 47
  start-page: 633
  year: 2002
  end-page: 668
  ident: b0345
  article-title: The population biology of oak gall wasps (Hymenoptera Cynipidae)
  publication-title: Annu. Rev. Entomol.
– volume: 33
  start-page: 1654
  year: 2016
  end-page: 1668
  ident: b0295
  article-title: Fast coalescent-based computation of local branch support from quartet frequencies
  publication-title: Mol. Biol. Evol.
– volume: 26
  start-page: 36
  year: 2003
  end-page: 45
  ident: b0280
  article-title: Lifecycle closure, lineage sorting, and hybridization revealed in a phylogenetic analysis of European oak gallwasps (Hymenoptera: Cynipidae: Cynipini) using mitochondrial sequence data
  publication-title: Mol. Phylogenet. Evol.
– volume: 42
  start-page: 651
  year: 1963
  end-page: 659
  ident: b0360
  article-title: New gall wasps (Hymenoptera, Cynipidae) from dog-rose in central Asia and Kazakhstan
  publication-title: Entomologicheskoe Obozrenie
– volume: 19
  start-page: 455
  year: 2012
  ident: 10.1016/j.ympev.2020.106949_b0025
  article-title: SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing
  publication-title: J. Comput. Biol.
  doi: 10.1089/cmb.2012.0021
– volume: 41
  start-page: 169
  year: 2007
  ident: 10.1016/j.ympev.2020.106949_b0005
  article-title: The diversity and phylogeography of cynipid gallwasps (Hymenoptera: Cynipidae) of the Oriental and Eastern Palearctic regions, and their associated communities
  publication-title: Oriental Insects
  doi: 10.1080/00305316.2007.10417504
– start-page: msaa106
  year: 2020
  ident: 10.1016/j.ympev.2020.106949_b0220
  article-title: New methods to calculate concordance factors for phylogenomic datasets
  publication-title: Mol. Biol. Evol.
– year: 2020
  ident: 10.1016/j.ympev.2020.106949_b0085
  article-title: Molecular systematics of Rosoideae (Rosaceae)
– volume: 7
  start-page: e7755
  year: 2019
  ident: 10.1016/j.ympev.2020.106949_b0130
  article-title: Adapterama I: universal stubs and primers for 384 unique dual-indexed or 147,456 combinatorially-indexed Illumina libraries (iTru & iNext)
  publication-title: PeerJ
  doi: 10.7717/peerj.7755
– volume: 61
  start-page: 1
  year: 2017
  ident: 10.1016/j.ympev.2020.106949_b0400
  article-title: Revision of Canadian Eurytomidae (Hymenoptera, Chalcidoidea) associated with galls induced by cynipid wasps of the genus Diplolepis Geoffroy (Hymenoptera, Cynipidae) and description of a new species
  publication-title: J. Hymenoptera Res.
  doi: 10.3897/jhr.61.13466
– volume: 14
  start-page: 587
  year: 2017
  ident: 10.1016/j.ympev.2020.106949_b0165
  article-title: ModelFinder: fast model selection for accurate phylogenetic estimates
  publication-title: Nat. Methods
  doi: 10.1038/nmeth.4285
– volume: 47
  start-page: 361
  year: 2019
  ident: 10.1016/j.ympev.2020.106949_b0215
  article-title: Parasitoid wasps associated with Diplolepis galls (Hymenoptera: Cynipidae) in Turkey: an updated checklist and report of three non-regular species
  publication-title: Phytoparasitica
  doi: 10.1007/s12600-019-00740-3
– volume: 55
  start-page: 2503
  year: 2001
  ident: 10.1016/j.ympev.2020.106949_b0285
  article-title: Evolution of the gall wasp-host plant association
  publication-title: Evolution
– volume: 146
  start-page: 321
  year: 2014
  ident: 10.1016/j.ympev.2020.106949_b0395
  article-title: Testing species limits of Eurytomidae (Hymenoptera) associated with galls induced by Diplolepis (Hymenoptera: Cynipidae) in Canada using an integrative approach
  publication-title: Can. Entomol.
  doi: 10.4039/tce.2013.70
– volume: 105
  start-page: 13486
  year: 2008
  ident: 10.1016/j.ympev.2020.106949_b0330
  article-title: Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified
  publication-title: PNAS
  doi: 10.1073/pnas.0803076105
– volume: 19
  start-page: 702
  year: 2019
  ident: 10.1016/j.ympev.2020.106949_b0095
  article-title: Optimized DNA extraction and library preparation for minute arthropods: application to target enrichment in chalcid wasps used for biocontrol
  publication-title: Mol. Ecol. Resour.
  doi: 10.1111/1755-0998.13006
– volume: 10
  start-page: 174
  year: 2010
  ident: 10.1016/j.ympev.2020.106949_b0195
  article-title: Mitochondrial heteroplasmy and DNA barcoding in Hawaiian Hylaeus (Nesoprosopis) bees (Hymenoptera: Colletidae)
  publication-title: BMC Evol. Biol.
  doi: 10.1186/1471-2148-10-174
– volume: 11
  start-page: e0161531
  year: 2016
  ident: 10.1016/j.ympev.2020.106949_b0040
  article-title: Sequence capture and phylogenetic utility of genomic ultraconserved elements obtained from pinned insect specimens
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0161531
– volume: 33
  start-page: 1654
  year: 2016
  ident: 10.1016/j.ympev.2020.106949_b0295
  article-title: Fast coalescent-based computation of local branch support from quartet frequencies
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msw079
– ident: 10.1016/j.ympev.2020.106949_b0310
– volume: 35
  start-page: 518
  year: 2017
  ident: 10.1016/j.ympev.2020.106949_b0155
  article-title: UFBoot2: Improving the ultrafast bootstrap approximation
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msx281
– volume: 36
  start-page: 925
  year: 1957
  ident: 10.1016/j.ympev.2020.106949_b0030
  article-title: Gall wasps (Hymenoptera: Cynipidae) in the USSR fauna developed on roses
  publication-title: Entomologicheskoe Obozrenie
– volume: 8
  start-page: 768
  year: 2017
  ident: 10.1016/j.ympev.2020.106949_b0065
  article-title: Enriching the ant tree of life: enhanced UCE bait set for genome-scale phylogenetics of ants and other Hymenoptera
  publication-title: Methods Ecol. Evol.
  doi: 10.1111/2041-210X.12742
– volume: 15
  start-page: 489
  year: 2015
  ident: 10.1016/j.ympev.2020.106949_b0115
  article-title: Target enrichment of ultraconserved elements from arthropods provides a genomic perspective on relationships among Hymenoptera
  publication-title: Mol. Ecol. Resour.
  doi: 10.1111/1755-0998.12328
– volume: 18
  start-page: 512
  year: 2003
  ident: 10.1016/j.ympev.2020.106949_b0340
  article-title: The adaptive significance of insect gall morphology
  publication-title: Trends Ecol. Evol.
  doi: 10.1016/S0169-5347(03)00247-7
– volume: 189
  start-page: 67
  year: 2017
  ident: 10.1016/j.ympev.2020.106949_b0235
  article-title: Sweet tetra-trophic interactions: multiple evolution of nectar secretion, a defensive extended phenotype in cynipid gall wasps
  publication-title: Am. Nat.
  doi: 10.1086/689399
– year: 1992
  ident: 10.1016/j.ympev.2020.106949_b0325
– volume: 17
  start-page: 540
  year: 2000
  ident: 10.1016/j.ympev.2020.106949_b0080
  article-title: Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/oxfordjournals.molbev.a026334
– volume: 26
  start-page: 6685
  year: 2017
  ident: 10.1016/j.ympev.2020.106949_b0350
  article-title: Tournament ABC analysis of the western Palaearctic population history of an oak gall wasp, Synergus umbraculus
  publication-title: Mol. Ecol.
  doi: 10.1111/mec.14372
– volume: 7
  start-page: e1000179
  year: 2009
  ident: 10.1016/j.ympev.2020.106949_b0020
  article-title: Host niches and defensive extended phenotypes structure parasitoid wasp communities
  publication-title: PLoS Biol.
  doi: 10.1371/journal.pbio.1000179
– volume: 110
  start-page: 204
  year: 2008
  ident: 10.1016/j.ympev.2020.106949_b0135
  article-title: Gall-inducing wasps of the genus Diplolepis (Hymenoptera: Cynipidae) on shrub roses of Turkey
  publication-title: Proc. Entomol. Soc. Wash.
  doi: 10.4289/0013-8797-110.1.204
– ident: 10.1016/j.ympev.2020.106949_b0200
  doi: 10.21425/F5FBG19694
– volume: 37
  start-page: 1530
  year: 2020
  ident: 10.1016/j.ympev.2020.106949_b0225
  article-title: IQ-TREE 2: New models and efficient methods for phylogenetic inference in the genomic era
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msaa015
– volume: 32
  start-page: 786
  year: 2015
  ident: 10.1016/j.ympev.2020.106949_b0110
  article-title: PHYLUCE is a software package for the analysis of conserved genomic loci
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/btv646
– volume: 1–2
  start-page: 1
  year: 2006
  ident: 10.1016/j.ympev.2020.106949_b0210
  article-title: Gall wasps of Ukraine
  publication-title: Cynipidae. Vestnik Zoologii
– volume: 1301
  start-page: 1
  year: 2006
  ident: 10.1016/j.ympev.2020.106949_b0015
  article-title: Catalogue of parasitoids and inquilines in galls of Aylacini, Diplolepidini and Pediaspidini (Hym., Cynipidae) in the West Palaearctic
  publication-title: Zootaxa
  doi: 10.11646/zootaxa.1301.1.1
– volume: 38
  start-page: 317
  year: 2013
  ident: 10.1016/j.ympev.2020.106949_b0370
  article-title: Taxonomic study of the genus Diplolepis Geoffroy (Hymenoptera, Cynipidae, Diplolepidini) in China, with descriptions of three new species
  publication-title: Acta Zootaxonomica Sinica
– volume: 104
  start-page: 335
  year: 2014
  ident: 10.1016/j.ympev.2020.106949_b0010
  article-title: The wasps, bees and ants (Insecta: Vespida= Hymenoptera) from the insect limestone (Late Eocene) of the Isle of Wight, UK
  publication-title: Earth Environ. Sci. Trans. Royal Soc. Edinburgh
  doi: 10.1017/S1755691014000103
– volume: 9
  start-page: 1453
  year: 2018
  ident: 10.1016/j.ympev.2020.106949_b0060
  article-title: On the universality of target-enrichment baits for phylogenomic research
  publication-title: Methods Ecol. Evol.
  doi: 10.1111/2041-210X.12988
– ident: 10.1016/j.ympev.2020.106949_b0045
  doi: 10.1002/0471142905.hg1804s66
– volume: 45
  start-page: 741
  year: 2018
  ident: 10.1016/j.ympev.2020.106949_b0270
  article-title: Conceptual and statistical problems with the DEC+ J model of founder-event speciation and its comparison with DEC via model selection
  publication-title: J. Biogeogr.
  doi: 10.1111/jbi.13173
– volume: 26
  start-page: 36
  year: 2003
  ident: 10.1016/j.ympev.2020.106949_b0280
  article-title: Lifecycle closure, lineage sorting, and hybridization revealed in a phylogenetic analysis of European oak gallwasps (Hymenoptera: Cynipidae: Cynipini) using mitochondrial sequence data
  publication-title: Mol. Phylogenet. Evol.
  doi: 10.1016/S1055-7903(02)00329-9
– volume: 47
  start-page: 633
  year: 2002
  ident: 10.1016/j.ympev.2020.106949_b0345
  article-title: The population biology of oak gall wasps (Hymenoptera Cynipidae)
  publication-title: Annu. Rev. Entomol.
  doi: 10.1146/annurev.ento.47.091201.145247
– volume: 52
  start-page: 131
  year: 2003
  ident: 10.1016/j.ympev.2020.106949_b0160
  article-title: Stochastic mapping of morphological characters
  publication-title: Syst. Biol.
  doi: 10.1080/10635150390192780
– volume: 6
  start-page: 423
  year: 2005
  ident: 10.1016/j.ympev.2020.106949_b0320
  article-title: Has egg location influenced the radiation of Diplolepis (Hymenoptera: Cynipidae) gall wasps on wild roses?
  publication-title: Basic Appl. Ecol.
  doi: 10.1016/j.baae.2005.07.006
– volume: 3
  start-page: 3
  year: 2019
  ident: 10.1016/j.ympev.2020.106949_b0410
  article-title: Understanding UCEs: a comprehensive primer on using ultraconserved elements for arthropod phylogenomics
  publication-title: Insect Syst. Diver.
  doi: 10.1093/isd/ixz016
– volume: 19
  start-page: 153
  year: 2018
  ident: 10.1016/j.ympev.2020.106949_b0390
  article-title: ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees
  publication-title: BMC Bioinf.
  doi: 10.1186/s12859-018-2129-y
– volume: 76
  start-page: 365
  year: 1998
  ident: 10.1016/j.ympev.2020.106949_b0070
  article-title: Developmental morphology of stem galls of Diplolepis nodulosa (Hymenoptera: Cynipidae) and those modified by the inquiline Periclistus pirata (Hymenoptera: Cynipidae) on Rosa blanda (Rosaceae)
  publication-title: Can. J. Bot.
– volume: 103
  start-page: 326
  year: 2013
  ident: 10.1016/j.ympev.2020.106949_b0180
  article-title: The enemy hypothesis: correlates of gall morphology with parasitoid attack rates in two closely related rose cynipid galls
  publication-title: Bull. Entomol. Res.
  doi: 10.1017/S0007485312000764
– volume: 22
  start-page: 939
  year: 2012
  ident: 10.1016/j.ympev.2020.106949_bib411
  article-title: Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture
  publication-title: Genome Res.
  doi: 10.1101/gr.128124.111
– start-page: 251
  year: 2010
  ident: 10.1016/j.ympev.2020.106949_b0315
  article-title: Galls induced by cynipid wasps of the genus Diplolepis (Hymenoptera: Cynipidae) on the roses of Canada’s grasslands
– volume: 34
  start-page: 772
  year: 2016
  ident: 10.1016/j.ympev.2020.106949_b0170
  article-title: PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses
  publication-title: Mol. Biol. Evol.
– volume: 115
  start-page: 275
  year: 2015
  ident: 10.1016/j.ympev.2020.106949_b0125
  article-title: Phylogeny and biogeography of wild roses with specific attention to polyploids
  publication-title: Ann. Bot.
  doi: 10.1093/aob/mcu245
– volume: 15
  year: 2019
  ident: 10.1016/j.ympev.2020.106949_b0150
  article-title: Genomic dissection of an extended phenotype: Oak galling by a cynipid gall wasp
  publication-title: PLoS Genet.
  doi: 10.1371/journal.pgen.1008398
– volume: 35
  start-page: 1798
  year: 2018
  ident: 10.1016/j.ympev.2020.106949_b0355
  article-title: Estimating improved partitioning schemes for ultraconserved elements
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msy069
– ident: 10.1016/j.ympev.2020.106949_b0265
– volume: 89
  start-page: 73
  year: 2006
  ident: 10.1016/j.ympev.2020.106949_b0190
  article-title: Rose gall wasps and their associated fauna (Hymenoptera) in Iran
  publication-title: Redia
– volume: 42
  start-page: 651
  year: 1963
  ident: 10.1016/j.ympev.2020.106949_b0360
  article-title: New gall wasps (Hymenoptera, Cynipidae) from dog-rose in central Asia and Kazakhstan
  publication-title: Entomologicheskoe Obozrenie
– volume: 37
  start-page: 604
  year: 2020
  ident: 10.1016/j.ympev.2020.106949_b0385
  article-title: RASP 4: ancestral state reconstruction tool for multiple genes and characters
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msz257
– ident: 10.1016/j.ympev.2020.106949_b0100
– volume: 8
  start-page: 28
  year: 2017
  ident: 10.1016/j.ympev.2020.106949_b0380
  article-title: ggtree: an R package for visualization and annotation of phylogenetic trees with their covariates and other associated data
  publication-title: Methods Ecol. Evol.
  doi: 10.1111/2041-210X.12628
– volume: 34
  start-page: 262
  year: 2017
  ident: 10.1016/j.ympev.2020.106949_b0375
  article-title: Evolution of rosaceae fruit types based on nuclear phylogeny in the context of geological times and genome duplication
  publication-title: Mol. Biol. Evol.
– volume: 6
  start-page: 435
  year: 2005
  ident: 10.1016/j.ympev.2020.106949_b0145
  article-title: Oak gall wasp communities: evolution and ecology
  publication-title: Basic Appl. Ecol.
  doi: 10.1016/j.baae.2005.07.003
– volume: 151
  start-page: 717
  year: 2019
  ident: 10.1016/j.ympev.2020.106949_b0405
  article-title: DNA barcodes reveal inconsistent species boundaries in Diplolepis rose gall wasps and their Periclistus inquilines (Hymenoptera: Cynipidae)
  publication-title: Can. Entomol.
  doi: 10.4039/tce.2019.59
– ident: 10.1016/j.ympev.2020.106949_b0335
  doi: 10.1098/rspb.1998.0387
– volume: 265
  start-page: 1075
  year: 1998
  ident: 10.1016/j.ympev.2020.106949_b0240
  article-title: Wolbachia–induced thelytoky in the rose gallwasp Diplolepis spinosissimae (Giraud) (Hymenoptera: Cynipidae), and its consequences on the genetic structure of its host
  publication-title: Proc. R. Soc. Lond. B Biol. Sci.
  doi: 10.1098/rspb.1998.0401
– volume: 904
  start-page: 131
  year: 2020
  ident: 10.1016/j.ympev.2020.106949_b0260
  article-title: A new Diplolepis Geoffroy (Hymenoptera, Cynipidae, Diplolepidini) species from China: a rare example of a rose gall-inducer of economic significance
  publication-title: ZooKeys
  doi: 10.3897/zookeys.904.46547
– volume: 80
  start-page: 231
  year: 2019
  ident: 10.1016/j.ympev.2020.106949_b0175
  article-title: Parasitoid community and parasitism in galls of the three Western Palaearctic oligo-and unilocular Diplolepis species (Hymenoptera: Cynipidae)
  publication-title: Folia Entomologica Hungarica
  doi: 10.17112/FoliaEntHung.2019.80.231
– volume: 4
  start-page: e1660
  year: 2016
  ident: 10.1016/j.ympev.2020.106949_b0055
  article-title: AMAS: a fast tool for alignment manipulation and computing of summary statistics
  publication-title: PeerJ
  doi: 10.7717/peerj.1660
– volume: 8
  start-page: 185
  year: 1999
  ident: 10.1016/j.ympev.2020.106949_b0120
  article-title: Distribution and phylogeny of Wolbachia inducing thelytoky in Rhoditini and ‘Aylacini’ (Hymenoptera: Cynipidae)
  publication-title: Insect Mol. Biol.
  doi: 10.1046/j.1365-2583.1999.820185.x
– volume: 75
  start-page: e091
  year: 2019
  ident: 10.1016/j.ympev.2020.106949_b0250
  article-title: Revision of the fossil figitid wasps (Insecta: Hymenoptera: Cynipoidea) described from compression deposits during the first half of the 20th century
  publication-title: Estud. Geol.
– volume: 3
  start-page: 217
  year: 2012
  ident: 10.1016/j.ympev.2020.106949_b0275
  article-title: phytools: an R package for phylogenetic comparative biology (and other things)
  publication-title: Methods Ecol. Evol.
  doi: 10.1111/j.2041-210X.2011.00169.x
– volume: 21
  start-page: 4051
  year: 2012
  ident: 10.1016/j.ympev.2020.106949_b0230
  article-title: Mitochondrial barcodes are diagnostic of shared refugia but not species in hybridizing oak gallwasps
  publication-title: Mol. Ecol.
  doi: 10.1111/j.1365-294X.2012.05683.x
– volume: 23
  start-page: 629
  year: 1907
  ident: 10.1016/j.ympev.2020.106949_b0035
  article-title: The North American species of Rhodites and their galls
  publication-title: Bull. Am. Museum Natural History
– volume: 19
  start-page: 1531
  year: 2019
  ident: 10.1016/j.ympev.2020.106949_b0105
  article-title: Sequence capture phylogenomics of historical ethanol-preserved museum specimens: Unlocking the rest of the vault
  publication-title: Mol. Ecol. Resour.
  doi: 10.1111/1755-0998.13072
– volume: 63
  start-page: 951
  year: 2014
  ident: 10.1016/j.ympev.2020.106949_b0205
  article-title: Model selection in historical biogeography reveals that founder-event speciation is a crucial process in island clades
  publication-title: Syst. Biol.
  doi: 10.1093/sysbio/syu056
– volume: 23
  start-page: 229
  year: 1998
  ident: 10.1016/j.ympev.2020.106949_b0185
  article-title: A phylogenetic analysis of higher-level gall wasp relationships (Hymenoptera: Cynipidae)
  publication-title: Syst. Entomol.
  doi: 10.1046/j.1365-3113.1998.00053.x
– volume: 4
  start-page: 1635
  year: 2019
  ident: 10.1016/j.ympev.2020.106949_b0050
  article-title: Spruceup: fast and flexible identification, visualization, and removal of outliers from large multiple sequence alignments
  publication-title: J. Open Source Software
  doi: 10.21105/joss.01635
– ident: 10.1016/j.ympev.2020.106949_b0245
– volume: 56
  start-page: 1821
  year: 2002
  ident: 10.1016/j.ympev.2020.106949_b0090
  article-title: Evolutionary shifts between host oak sections and host-plant organs in Andricus gallwasps
  publication-title: Evolution
  doi: 10.1111/j.0014-3820.2002.tb00196.x
– start-page: 135
  year: 2002
  ident: 10.1016/j.ympev.2020.106949_b0255
  article-title: About the validity of Diplolepis fructuum (Rübsaamen) and some new synonyms in Diplolepis nervosa (Curtis) (Hymenoptera: Cynipidae: Diplolepidini)
– volume: 59
  start-page: 307
  year: 2010
  ident: 10.1016/j.ympev.2020.106949_b0140
  article-title: New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0
  publication-title: Syst. Biol.
  doi: 10.1093/sysbio/syq010
– start-page: 1045
  year: 1979
  ident: 10.1016/j.ympev.2020.106949_b0075
  article-title: Superfamily Cynipoidea
– volume: 127
  start-page: 79
  year: 1980
  ident: 10.1016/j.ympev.2020.106949_b0305
  article-title: Modification of galls of Diplolepis polita by the inquiline Periclistus pirata. Bulletin de la Société Botanique de France
  publication-title: Actualités Botaniques
– volume: 81
  start-page: 270
  year: 1998
  ident: 10.1016/j.ympev.2020.106949_b0300
  article-title: Distribution of Wolbachia among the guild associated with the parthenogenetic gall wasp Diplolepis rosae
  publication-title: Heredity
  doi: 10.1046/j.1365-2540.1998.00385.x
– volume: 37
  start-page: 599
  year: 2020
  ident: 10.1016/j.ympev.2020.106949_b0365
  article-title: treeio: an R package for phylogenetic tree input and output with richly annotated and associated data
  publication-title: Mol. Biol. Evol.
  doi: 10.1093/molbev/msz240
– volume: 10
  start-page: e0123301
  year: 2015
  ident: 10.1016/j.ympev.2020.106949_b0290
  article-title: Phylogeny, evolution and classification of gall wasps: the plot thickens
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0123301
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Snippet [Display omitted] •First phylogenomic study of global rose gall wasps (Diplolepis), which employed UCEs.•Two main clades, one with Nearctic stem-galler, and...
Gall wasps in the genus Diplolepis Geoffroy are specialized herbivores that induce galls exclusively on roses. Despite their wide distribution across the...
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SubjectTerms Ancestral state reconstruction
Animals
Biogeography
Conserved Sequence - genetics
Diplolepis
Gall wasp
galls
Genes, Mitochondrial - genetics
herbivores
host plants
leaves
mitochondrial genes
monophyly
Nearctic region
North America
Palearctic region
Phylogenomic
Phylogeny
Rosa
Rosa - parasitology
stems
Target capture
topology
Ultraconserved elements
Wasps - classification
Wasps - genetics
Title UCE data reveal multiple origins of rose gallers in North America: Global phylogeny of Diplolepis Geoffroy (Hymenoptera: Cynipidae)
URI https://dx.doi.org/10.1016/j.ympev.2020.106949
https://www.ncbi.nlm.nih.gov/pubmed/32866614
https://www.proquest.com/docview/2439622317
https://www.proquest.com/docview/2477632390
Volume 153
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