HEPeak: an HMM-based exome peak-finding package for RNA epigenome sequencing data - Cui, Xiaodong; Meng, Jia; Rao, Manjeet K; Chen, Yidong; Huang, Yufei (BMC genomics, 2015)
Keywords: Algorithms; Animal Genetics and Genomics; Animals; Biomedical and Life Sciences; Cells, Cultured; Epigenomics - methods; Exome; HEK293 Cells; Humans; Life Sciences; Markov Chains; Mesencephalon - cytology; Methylation; Mice; Microarrays; Microbial Genetics and Genomics; Plant Genetics and Genomics; Proteomics; RNA Processing, Post-Transcriptional; RNA, Messenger - chemistry; RNA, Messenger - metabolism; Sequence Analysis, RNA - methods; Read Count; Peak Region; Hide Markov Model; Methylation Status; Receiver Operating Characteristic