A Direct Algorithm for Optimization Problems With the Huber Penalty
We present a direct (noniterative) algorithm for 1-D quadratic data fitting with neighboring intensity differences penalized by the Huber function. Applications of such an algorithm include 1-D processing of medical signals, such as smoothing of tissue time concentration curves in kinetic data analy...
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| Published in | IEEE transactions on medical imaging Vol. 37; no. 1; pp. 162 - 172 |
|---|---|
| Main Authors | , , |
| Format | Journal Article |
| Language | English |
| Published |
United States
IEEE
01.01.2018
The Institute of Electrical and Electronics Engineers, Inc. (IEEE) |
| Subjects | |
| Online Access | Get full text |
| ISSN | 0278-0062 1558-254X 1558-254X |
| DOI | 10.1109/TMI.2017.2760104 |
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| Abstract | We present a direct (noniterative) algorithm for 1-D quadratic data fitting with neighboring intensity differences penalized by the Huber function. Applications of such an algorithm include 1-D processing of medical signals, such as smoothing of tissue time concentration curves in kinetic data analysis or sinogram preprocessing, and using it as a subproblem solver for 2-D or 3-D image restoration and reconstruction. dynamic programming was used to develop the direct algorithm. The problem was reformulated as a sequence of univariate optimization problems, for k = 1, . .., N, where Nis the number of data points. The solution to the univariate problem at index kis parameterized by the solution at k + 1, except at k = N. Solving the univariate optimization problem at k = N yields the solution to each problem in the sequence using back-tracking. Computational issues and memory cost are discussed in detail. Two numerical studies, tissue concentration curve smoothing and sinogram preprocessing for image reconstruction, are used to validate the direct algorithm and illustrate its practical applications. In the example of 1-D curve smoothing, the efficiency of the direct algorithm is compared with four iterative methods: the iterative coordinate descent, Nesterov's accelerated gradient descent algorithm, FISTA, and an off-the-shelf second order method. The first two methods were applied to the primal problem, the others to the dual problem. The comparisons show that the direct algorithm outperforms all other methods by a significant factor, which rapidly grows with the curvature of the Huber function. The second example, sinogram preprocessing, showed that robustness and speed of the direct algorithm are maintained over a wide range of signal variations, and that noise and streaking artifacts could be reduced with almost no increase in computation time. We also outline how the proposed 1-D solver can be used for imaging applications. |
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| AbstractList | We present a direct (noniterative) algorithm for 1-D quadratic data fitting with neighboring intensity differences penalized by the Huber function. Applications of such an algorithm include 1-D processing of medical signals, such as smoothing of tissue time concentration curves in kinetic data analysis or sinogram preprocessing, and using it as a subproblem solver for 2-D or 3-D image restoration and reconstruction. dynamic programming was used to develop the direct algorithm. The problem was reformulated as a sequence of univariate optimization problems, for , where is the number of data points. The solution to the univariate problem at index is parameterized by the solution at , except at . Solving the univariate optimization problem at yields the solution to each problem in the sequence using back-tracking. Computational issues and memory cost are discussed in detail. Two numerical studies, tissue concentration curve smoothing and sinogram preprocessing for image reconstruction, are used to validate the direct algorithm and illustrate its practical applications. In the example of 1-D curve smoothing, the efficiency of the direct algorithm is compared with four iterative methods: the iterative coordinate descent, Nesterov's accelerated gradient descent algorithm, FISTA, and an off-the-shelf second order method. The first two methods were applied to the primal problem, the others to the dual problem. The comparisons show that the direct algorithm outperforms all other methods by a significant factor, which rapidly grows with the curvature of the Huber function. The second example, sinogram preprocessing, showed that robustness and speed of the direct algorithm are maintained over a wide range of signal variations, and that noise and streaking artifacts could be reduced with almost no increase in computation time. We also outline how the proposed 1-D solver can be used for imaging applications.We present a direct (noniterative) algorithm for 1-D quadratic data fitting with neighboring intensity differences penalized by the Huber function. Applications of such an algorithm include 1-D processing of medical signals, such as smoothing of tissue time concentration curves in kinetic data analysis or sinogram preprocessing, and using it as a subproblem solver for 2-D or 3-D image restoration and reconstruction. dynamic programming was used to develop the direct algorithm. The problem was reformulated as a sequence of univariate optimization problems, for , where is the number of data points. The solution to the univariate problem at index is parameterized by the solution at , except at . Solving the univariate optimization problem at yields the solution to each problem in the sequence using back-tracking. Computational issues and memory cost are discussed in detail. Two numerical studies, tissue concentration curve smoothing and sinogram preprocessing for image reconstruction, are used to validate the direct algorithm and illustrate its practical applications. In the example of 1-D curve smoothing, the efficiency of the direct algorithm is compared with four iterative methods: the iterative coordinate descent, Nesterov's accelerated gradient descent algorithm, FISTA, and an off-the-shelf second order method. The first two methods were applied to the primal problem, the others to the dual problem. The comparisons show that the direct algorithm outperforms all other methods by a significant factor, which rapidly grows with the curvature of the Huber function. The second example, sinogram preprocessing, showed that robustness and speed of the direct algorithm are maintained over a wide range of signal variations, and that noise and streaking artifacts could be reduced with almost no increase in computation time. We also outline how the proposed 1-D solver can be used for imaging applications. We present a direct (noniterative) algorithm for 1-D quadratic data fitting with neighboring intensity differences penalized by the Huber function. Applications of such an algorithm include 1-D processing of medical signals, such as smoothing of tissue time concentration curves in kinetic data analysis or sinogram preprocessing, and using it as a subproblem solver for 2-D or 3-D image restoration and reconstruction. dynamic programming was used to develop the direct algorithm. The problem was reformulated as a sequence of univariate optimization problems, for k = 1, . .., N, where Nis the number of data points. The solution to the univariate problem at index kis parameterized by the solution at k + 1, except at k = N. Solving the univariate optimization problem at k = N yields the solution to each problem in the sequence using back-tracking. Computational issues and memory cost are discussed in detail. Two numerical studies, tissue concentration curve smoothing and sinogram preprocessing for image reconstruction, are used to validate the direct algorithm and illustrate its practical applications. In the example of 1-D curve smoothing, the efficiency of the direct algorithm is compared with four iterative methods: the iterative coordinate descent, Nesterov's accelerated gradient descent algorithm, FISTA, and an off-the-shelf second order method. The first two methods were applied to the primal problem, the others to the dual problem. The comparisons show that the direct algorithm outperforms all other methods by a significant factor, which rapidly grows with the curvature of the Huber function. The second example, sinogram preprocessing, showed that robustness and speed of the direct algorithm are maintained over a wide range of signal variations, and that noise and streaking artifacts could be reduced with almost no increase in computation time. We also outline how the proposed 1-D solver can be used for imaging applications. We present a direct (noniterative) algorithm for one dimensional (1-D) quadratic data fitting with neighboring intensity differences penalized by the Huber function. Applications of such an algorithm include 1-D processing of medical signals, such as smoothing of tissue time concentration curves in kinetic data analysis or sinogram preprocessing, and using it as a subproblem solver for 2-D or 3-D image restoration and reconstruction. Dynamic programming (DP) was used to develop the direct algorithm. The problem was reformulated as a sequence of univariate optimization problems, for k = 1, ···, N, where N is the number of data points. The solution to the univariate problem at index k is parameterized by the solution at k + 1, except at k = N. Solving the univariate optimization problem at k = N yields the solution to each problem in the sequence using backtracking. Computational issues and memory cost are discussed in detail. Two numerical studies, tissue concentration curve smoothing and sinogram preprocessing for image reconstruction, are used to validate the direct algorithm and illustrate its practical applications. In the example of 1-D curve smoothing, the efficiency of the direct algorithm is compared with four iterative methods: the iterative coordinate descent, Nesterov’s accelerated gradient descent algorithm, FISTA, and an off-the-shelf second order method. The first two methods were applied to the primal problem, the others to the dual problem. The comparisons show that the direct algorithm outperforms all other methods by a significant factor, which rapidly grows with the curvature of the Huber function. The second example, sinogram preprocessing, showed that robustness and speed of the direct algorithm are maintained over a wide range of signal variations, and that noise and streaking artifacts could be reduced with almost no increase in computation time. We also outline the application of the proposed 1-D solver for imaging applications. We present a direct (noniterative) algorithm for 1-D quadratic data fitting with neighboring intensity differences penalized by the Huber function. Applications of such an algorithm include 1-D processing of medical signals, such as smoothing of tissue time concentration curves in kinetic data analysis or sinogram preprocessing, and using it as a subproblem solver for 2-D or 3-D image restoration and reconstruction. dynamic programming was used to develop the direct algorithm. The problem was reformulated as a sequence of univariate optimization problems, for , where is the number of data points. The solution to the univariate problem at index is parameterized by the solution at , except at . Solving the univariate optimization problem at yields the solution to each problem in the sequence using back-tracking. Computational issues and memory cost are discussed in detail. Two numerical studies, tissue concentration curve smoothing and sinogram preprocessing for image reconstruction, are used to validate the direct algorithm and illustrate its practical applications. In the example of 1-D curve smoothing, the efficiency of the direct algorithm is compared with four iterative methods: the iterative coordinate descent, Nesterov's accelerated gradient descent algorithm, FISTA, and an off-the-shelf second order method. The first two methods were applied to the primal problem, the others to the dual problem. The comparisons show that the direct algorithm outperforms all other methods by a significant factor, which rapidly grows with the curvature of the Huber function. The second example, sinogram preprocessing, showed that robustness and speed of the direct algorithm are maintained over a wide range of signal variations, and that noise and streaking artifacts could be reduced with almost no increase in computation time. We also outline how the proposed 1-D solver can be used for imaging applications. |
| Author | Noo, Frederic Tsui, Benjamin M. W. Xu, Jingyan |
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| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/28981412$$D View this record in MEDLINE/PubMed |
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| References | ref13 ref12 ref15 ref14 zhang (ref3) 2013 ref31 ref30 ref11 ref32 ref10 nesterov (ref19) 1983; 27 gifford (ref7) 2002; 3 ref2 ref1 ref16 ref18 burger (ref26) 2013 ref24 condat (ref5) 2012 ref23 nocedal (ref17) 2006 ref25 ref20 ref22 ref28 dreyfus (ref21) 1977 ref27 ref29 ref8 ref9 ref4 ref6 |
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| Snippet | We present a direct (noniterative) algorithm for 1-D quadratic data fitting with neighboring intensity differences penalized by the Huber function.... We present a direct (noniterative) algorithm for one dimensional (1-D) quadratic data fitting with neighboring intensity differences penalized by the Huber... |
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| SubjectTerms | Abdomen - diagnostic imaging Algorithm design and analysis Algorithms Computer applications Computer memory Curvature Data analysis Data points Data processing Denoising Dynamic programming Heuristic algorithms Huber penalty Humans Image processing Image Processing, Computer-Assisted - methods Image reconstruction Image restoration Imaging Information processing Iterative methods Mathematical analysis Minimization Models, Statistical Optimization Phantoms, Imaging Preprocessing robust estimation Robustness (mathematics) Signal processing Signal processing algorithms Signal Processing, Computer-Assisted Smoothing Smoothing methods Tissues total variation |
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| Title | A Direct Algorithm for Optimization Problems With the Huber Penalty |
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