Identifying and classifying opioid‐related overdoses: A validation study
Purpose The study aims to develop and validate algorithms to identify and classify opioid overdoses using claims and other coded data, and clinical text extracted from electronic health records using natural language processing (NLP). Methods Primary data were derived from Kaiser Permanente Northwes...
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| Published in | Pharmacoepidemiology and drug safety Vol. 28; no. 8; pp. 1127 - 1137 |
|---|---|
| Main Authors | , , , , , , , , , |
| Format | Journal Article |
| Language | English |
| Published |
England
Wiley Subscription Services, Inc
01.08.2019
John Wiley and Sons Inc |
| Subjects | |
| Online Access | Get full text |
| ISSN | 1053-8569 1099-1557 1099-1557 |
| DOI | 10.1002/pds.4772 |
Cover
| Abstract | Purpose
The study aims to develop and validate algorithms to identify and classify opioid overdoses using claims and other coded data, and clinical text extracted from electronic health records using natural language processing (NLP).
Methods
Primary data were derived from Kaiser Permanente Northwest (2008–2014), an integrated health care system (~n > 475 000 unique individuals per year). Data included International Classification of Diseases, Ninth Revision (ICD‐9) codes for nonfatal diagnoses, International Classification of Diseases, Tenth Revision (ICD‐10) codes for fatal events, clinical notes, and prescription medication records. We assessed sensitivity, specificity, positive predictive value, and negative predictive value for algorithms relative to medical chart review and conducted assessments of algorithm portability in Kaiser Permanente Washington, Tennessee State Medicaid, and Optum.
Results
Code‐based algorithm performance was excellent for opioid‐related overdoses (sensitivity = 97.2%, specificity = 84.6%) and classification of heroin‐involved overdoses (sensitivity = 91.8%, specificity = 99.0%). Performance was acceptable for code‐based suicide/suicide attempt classifications (sensitivity = 70.7%, specificity = 90.5%); sensitivity improved with NLP (sensitivity = 78.7%, specificity = 91.0%). Performance was acceptable for the code‐based substance abuse‐involved classification (sensitivity = 75.3%, specificity = 79.5%); sensitivity improved with the NLP‐enhanced algorithm (sensitivity = 80.5%, specificity = 76.3%). The opioid‐related overdose algorithm performed well across portability assessment sites, with sensitivity greater than 96% and specificity greater than 84%. Cross‐site sensitivity for heroin‐involved overdose was greater than 87%, specificity greater than or equal to 99%.
Conclusions
Code‐based algorithms developed to detect opioid‐related overdoses and classify them according to heroin involvement perform well. Algorithms for classifying suicides/attempts and abuse‐related opioid overdoses perform adequately for use for research, particularly given the complexity of classifying such overdoses. The NLP‐enhanced algorithms for suicides/suicide attempts and abuse‐related overdoses perform significantly better than code‐based algorithms and are appropriate for use in settings that have data and capacity to use NLP. |
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| AbstractList | PurposeThe study aims to develop and validate algorithms to identify and classify opioid overdoses using claims and other coded data, and clinical text extracted from electronic health records using natural language processing (NLP).MethodsPrimary data were derived from Kaiser Permanente Northwest (2008–2014), an integrated health care system (~n > 475 000 unique individuals per year). Data included International Classification of Diseases, Ninth Revision (ICD‐9) codes for nonfatal diagnoses, International Classification of Diseases, Tenth Revision (ICD‐10) codes for fatal events, clinical notes, and prescription medication records. We assessed sensitivity, specificity, positive predictive value, and negative predictive value for algorithms relative to medical chart review and conducted assessments of algorithm portability in Kaiser Permanente Washington, Tennessee State Medicaid, and Optum.ResultsCode‐based algorithm performance was excellent for opioid‐related overdoses (sensitivity = 97.2%, specificity = 84.6%) and classification of heroin‐involved overdoses (sensitivity = 91.8%, specificity = 99.0%). Performance was acceptable for code‐based suicide/suicide attempt classifications (sensitivity = 70.7%, specificity = 90.5%); sensitivity improved with NLP (sensitivity = 78.7%, specificity = 91.0%). Performance was acceptable for the code‐based substance abuse‐involved classification (sensitivity = 75.3%, specificity = 79.5%); sensitivity improved with the NLP‐enhanced algorithm (sensitivity = 80.5%, specificity = 76.3%). The opioid‐related overdose algorithm performed well across portability assessment sites, with sensitivity greater than 96% and specificity greater than 84%. Cross‐site sensitivity for heroin‐involved overdose was greater than 87%, specificity greater than or equal to 99%.ConclusionsCode‐based algorithms developed to detect opioid‐related overdoses and classify them according to heroin involvement perform well. Algorithms for classifying suicides/attempts and abuse‐related opioid overdoses perform adequately for use for research, particularly given the complexity of classifying such overdoses. The NLP‐enhanced algorithms for suicides/suicide attempts and abuse‐related overdoses perform significantly better than code‐based algorithms and are appropriate for use in settings that have data and capacity to use NLP. The study aims to develop and validate algorithms to identify and classify opioid overdoses using claims and other coded data, and clinical text extracted from electronic health records using natural language processing (NLP).PURPOSEThe study aims to develop and validate algorithms to identify and classify opioid overdoses using claims and other coded data, and clinical text extracted from electronic health records using natural language processing (NLP).Primary data were derived from Kaiser Permanente Northwest (2008-2014), an integrated health care system (~n > 475 000 unique individuals per year). Data included International Classification of Diseases, Ninth Revision (ICD-9) codes for nonfatal diagnoses, International Classification of Diseases, Tenth Revision (ICD-10) codes for fatal events, clinical notes, and prescription medication records. We assessed sensitivity, specificity, positive predictive value, and negative predictive value for algorithms relative to medical chart review and conducted assessments of algorithm portability in Kaiser Permanente Washington, Tennessee State Medicaid, and Optum.METHODSPrimary data were derived from Kaiser Permanente Northwest (2008-2014), an integrated health care system (~n > 475 000 unique individuals per year). Data included International Classification of Diseases, Ninth Revision (ICD-9) codes for nonfatal diagnoses, International Classification of Diseases, Tenth Revision (ICD-10) codes for fatal events, clinical notes, and prescription medication records. We assessed sensitivity, specificity, positive predictive value, and negative predictive value for algorithms relative to medical chart review and conducted assessments of algorithm portability in Kaiser Permanente Washington, Tennessee State Medicaid, and Optum.Code-based algorithm performance was excellent for opioid-related overdoses (sensitivity = 97.2%, specificity = 84.6%) and classification of heroin-involved overdoses (sensitivity = 91.8%, specificity = 99.0%). Performance was acceptable for code-based suicide/suicide attempt classifications (sensitivity = 70.7%, specificity = 90.5%); sensitivity improved with NLP (sensitivity = 78.7%, specificity = 91.0%). Performance was acceptable for the code-based substance abuse-involved classification (sensitivity = 75.3%, specificity = 79.5%); sensitivity improved with the NLP-enhanced algorithm (sensitivity = 80.5%, specificity = 76.3%). The opioid-related overdose algorithm performed well across portability assessment sites, with sensitivity greater than 96% and specificity greater than 84%. Cross-site sensitivity for heroin-involved overdose was greater than 87%, specificity greater than or equal to 99%.RESULTSCode-based algorithm performance was excellent for opioid-related overdoses (sensitivity = 97.2%, specificity = 84.6%) and classification of heroin-involved overdoses (sensitivity = 91.8%, specificity = 99.0%). Performance was acceptable for code-based suicide/suicide attempt classifications (sensitivity = 70.7%, specificity = 90.5%); sensitivity improved with NLP (sensitivity = 78.7%, specificity = 91.0%). Performance was acceptable for the code-based substance abuse-involved classification (sensitivity = 75.3%, specificity = 79.5%); sensitivity improved with the NLP-enhanced algorithm (sensitivity = 80.5%, specificity = 76.3%). The opioid-related overdose algorithm performed well across portability assessment sites, with sensitivity greater than 96% and specificity greater than 84%. Cross-site sensitivity for heroin-involved overdose was greater than 87%, specificity greater than or equal to 99%.Code-based algorithms developed to detect opioid-related overdoses and classify them according to heroin involvement perform well. Algorithms for classifying suicides/attempts and abuse-related opioid overdoses perform adequately for use for research, particularly given the complexity of classifying such overdoses. The NLP-enhanced algorithms for suicides/suicide attempts and abuse-related overdoses perform significantly better than code-based algorithms and are appropriate for use in settings that have data and capacity to use NLP.CONCLUSIONSCode-based algorithms developed to detect opioid-related overdoses and classify them according to heroin involvement perform well. Algorithms for classifying suicides/attempts and abuse-related opioid overdoses perform adequately for use for research, particularly given the complexity of classifying such overdoses. The NLP-enhanced algorithms for suicides/suicide attempts and abuse-related overdoses perform significantly better than code-based algorithms and are appropriate for use in settings that have data and capacity to use NLP. Purpose The study aims to develop and validate algorithms to identify and classify opioid overdoses using claims and other coded data, and clinical text extracted from electronic health records using natural language processing (NLP). Methods Primary data were derived from Kaiser Permanente Northwest (2008–2014), an integrated health care system (~n > 475 000 unique individuals per year). Data included International Classification of Diseases, Ninth Revision (ICD‐9) codes for nonfatal diagnoses, International Classification of Diseases, Tenth Revision (ICD‐10) codes for fatal events, clinical notes, and prescription medication records. We assessed sensitivity, specificity, positive predictive value, and negative predictive value for algorithms relative to medical chart review and conducted assessments of algorithm portability in Kaiser Permanente Washington, Tennessee State Medicaid, and Optum. Results Code‐based algorithm performance was excellent for opioid‐related overdoses (sensitivity = 97.2%, specificity = 84.6%) and classification of heroin‐involved overdoses (sensitivity = 91.8%, specificity = 99.0%). Performance was acceptable for code‐based suicide/suicide attempt classifications (sensitivity = 70.7%, specificity = 90.5%); sensitivity improved with NLP (sensitivity = 78.7%, specificity = 91.0%). Performance was acceptable for the code‐based substance abuse‐involved classification (sensitivity = 75.3%, specificity = 79.5%); sensitivity improved with the NLP‐enhanced algorithm (sensitivity = 80.5%, specificity = 76.3%). The opioid‐related overdose algorithm performed well across portability assessment sites, with sensitivity greater than 96% and specificity greater than 84%. Cross‐site sensitivity for heroin‐involved overdose was greater than 87%, specificity greater than or equal to 99%. Conclusions Code‐based algorithms developed to detect opioid‐related overdoses and classify them according to heroin involvement perform well. Algorithms for classifying suicides/attempts and abuse‐related opioid overdoses perform adequately for use for research, particularly given the complexity of classifying such overdoses. The NLP‐enhanced algorithms for suicides/suicide attempts and abuse‐related overdoses perform significantly better than code‐based algorithms and are appropriate for use in settings that have data and capacity to use NLP. The study aims to develop and validate algorithms to identify and classify opioid overdoses using claims and other coded data, and clinical text extracted from electronic health records using natural language processing (NLP). Primary data were derived from Kaiser Permanente Northwest (2008-2014), an integrated health care system (~n > 475 000 unique individuals per year). Data included International Classification of Diseases, Ninth Revision (ICD-9) codes for nonfatal diagnoses, International Classification of Diseases, Tenth Revision (ICD-10) codes for fatal events, clinical notes, and prescription medication records. We assessed sensitivity, specificity, positive predictive value, and negative predictive value for algorithms relative to medical chart review and conducted assessments of algorithm portability in Kaiser Permanente Washington, Tennessee State Medicaid, and Optum. Code-based algorithm performance was excellent for opioid-related overdoses (sensitivity = 97.2%, specificity = 84.6%) and classification of heroin-involved overdoses (sensitivity = 91.8%, specificity = 99.0%). Performance was acceptable for code-based suicide/suicide attempt classifications (sensitivity = 70.7%, specificity = 90.5%); sensitivity improved with NLP (sensitivity = 78.7%, specificity = 91.0%). Performance was acceptable for the code-based substance abuse-involved classification (sensitivity = 75.3%, specificity = 79.5%); sensitivity improved with the NLP-enhanced algorithm (sensitivity = 80.5%, specificity = 76.3%). The opioid-related overdose algorithm performed well across portability assessment sites, with sensitivity greater than 96% and specificity greater than 84%. Cross-site sensitivity for heroin-involved overdose was greater than 87%, specificity greater than or equal to 99%. Code-based algorithms developed to detect opioid-related overdoses and classify them according to heroin involvement perform well. Algorithms for classifying suicides/attempts and abuse-related opioid overdoses perform adequately for use for research, particularly given the complexity of classifying such overdoses. The NLP-enhanced algorithms for suicides/suicide attempts and abuse-related overdoses perform significantly better than code-based algorithms and are appropriate for use in settings that have data and capacity to use NLP. |
| Author | Green, Carla A. Perrin, Nancy A. Liang, Caihua Enger, Cheryl L. Coplan, Paul M. Hazlehurst, Brian DeVeaugh‐Geiss, Angela Grijalva, Carlos G. Janoff, Shannon L. Carrell, David S. |
| AuthorAffiliation | 3 Epidemiology, Johnson & Johnson New Brunswick New Jersey 4 Health Research Institute, Kaiser Permanente Washington Seattle Washington 1 Center for Health Research, Kaiser Permanente Northwest Portland Oregon 7 Epidemiology Optum Ann Arbor Michigan 2 Indivior, Inc. North Chesterfield Virginia 8 Adjunct, Perelman School of Medicine University of Pennsylvania Philadelphia Pennsylvania 6 Epidemiology Optum Boston Massachusetts 9 Johns Hopkins School of Nursing Johns Hopkins University Baltimore Maryland 5 Department of Health Policy Vanderbilt University Medical Center Nashville Tennessee |
| AuthorAffiliation_xml | – name: 4 Health Research Institute, Kaiser Permanente Washington Seattle Washington – name: 9 Johns Hopkins School of Nursing Johns Hopkins University Baltimore Maryland – name: 5 Department of Health Policy Vanderbilt University Medical Center Nashville Tennessee – name: 7 Epidemiology Optum Ann Arbor Michigan – name: 8 Adjunct, Perelman School of Medicine University of Pennsylvania Philadelphia Pennsylvania – name: 2 Indivior, Inc. North Chesterfield Virginia – name: 6 Epidemiology Optum Boston Massachusetts – name: 3 Epidemiology, Johnson & Johnson New Brunswick New Jersey – name: 1 Center for Health Research, Kaiser Permanente Northwest Portland Oregon |
| Author_xml | – sequence: 1 givenname: Carla A. orcidid: 0000-0002-0000-4381 surname: Green fullname: Green, Carla A. organization: Center for Health Research, Kaiser Permanente Northwest – sequence: 2 givenname: Nancy A. surname: Perrin fullname: Perrin, Nancy A. organization: Johns Hopkins University – sequence: 3 givenname: Brian orcidid: 0000-0001-9365-3964 surname: Hazlehurst fullname: Hazlehurst, Brian email: brian.hazlehurst@kpchr.org organization: Center for Health Research, Kaiser Permanente Northwest – sequence: 4 givenname: Shannon L. surname: Janoff fullname: Janoff, Shannon L. organization: Center for Health Research, Kaiser Permanente Northwest – sequence: 5 givenname: Angela surname: DeVeaugh‐Geiss fullname: DeVeaugh‐Geiss, Angela – sequence: 6 givenname: David S. orcidid: 0000-0002-8471-0928 surname: Carrell fullname: Carrell, David S. – sequence: 7 givenname: Carlos G. surname: Grijalva fullname: Grijalva, Carlos G. organization: Vanderbilt University Medical Center – sequence: 8 givenname: Caihua orcidid: 0000-0001-6934-3587 surname: Liang fullname: Liang, Caihua organization: Optum – sequence: 9 givenname: Cheryl L. surname: Enger fullname: Enger, Cheryl L. organization: Optum – sequence: 10 givenname: Paul M. surname: Coplan fullname: Coplan, Paul M. organization: University of Pennsylvania |
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The study aims to develop and validate algorithms to identify and classify opioid overdoses using claims and other coded data, and clinical text... The study aims to develop and validate algorithms to identify and classify opioid overdoses using claims and other coded data, and clinical text extracted from... PurposeThe study aims to develop and validate algorithms to identify and classify opioid overdoses using claims and other coded data, and clinical text... |
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| SubjectTerms | abuse Algorithms Analgesics, Opioid - poisoning Classification Drug abuse Drug overdose Drug Overdose - classification Drug Overdose - epidemiology Electronic Health Records - statistics & numerical data Electronic medical records Female Heroin Heroin - poisoning Humans Male methods Middle Aged Narcotics Natural Language Processing opioid overdose Opioid-Related Disorders - complications Opioids Original Report Original Reports Overdose pharmacoepidemiology Sensitivity and Specificity Suicide Suicide - statistics & numerical data Suicide, Attempted - statistics & numerical data Suicides & suicide attempts |
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| Title | Identifying and classifying opioid‐related overdoses: A validation study |
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