Bioinformatics matters: The accuracy of plant and soil fungal community data is highly dependent on the metabarcoding pipeline - Pauvert, Charlie; Buée, Marc; Laval, Valérie; Edel-Hermann, Véronique; Fauchery, Laure; Gautier, Angélique; Lesur, Isabelle; Vallance, Jessica; Vacher, Corinne (Fungal ecology, 2019)
Keywords: algorithms; Ascomycota; Basidiomycota; Bioinformatics; computer software; DADA2; DNA barcoding; Environmental DNA; Environmental Sciences; fungal communities; Fungi; Illumina MiSeq; Internal transcribed spacer (ITS); internal transcribed spacers; Life Sciences; LULU; Metabarcoding; soil; soil fungi; USEARCH; Vegetal Biology; VSEARCH; Environmental DNA; Fungi; Internal transcribed spacer (ITS); Metabarcoding; LULU; USEARCH; Illumina MiSeq; DADA2; VSEARCH; Bioinformatics