Deep residual inception encoder‐decoder network for amyloid PET harmonization

Introduction Multiple positron emission tomography (PET) tracers are available for amyloid imaging, posing a significant challenge to consensus interpretation and quantitative analysis. We accordingly developed and validated a deep learning model as a harmonization strategy. Method A Residual Incept...

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Published inAlzheimer's & dementia Vol. 18; no. 12; pp. 2448 - 2457
Main Authors Shah, Jay, Gao, Fei, Li, Baoxin, Ghisays, Valentina, Luo, Ji, Chen, Yinghua, Lee, Wendy, Zhou, Yuxiang, Benzinger, Tammie L.S., Reiman, Eric M., Chen, Kewei, Su, Yi, Wu, Teresa
Format Journal Article
LanguageEnglish
Published United States John Wiley and Sons Inc 01.12.2022
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Online AccessGet full text
ISSN1552-5260
1552-5279
1552-5279
DOI10.1002/alz.12564

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Abstract Introduction Multiple positron emission tomography (PET) tracers are available for amyloid imaging, posing a significant challenge to consensus interpretation and quantitative analysis. We accordingly developed and validated a deep learning model as a harmonization strategy. Method A Residual Inception Encoder‐Decoder Neural Network was developed to harmonize images between amyloid PET image pairs made with Pittsburgh Compound‐B and florbetapir tracers. The model was trained using a dataset with 92 subjects with 10‐fold cross validation and its generalizability was further examined using an independent external dataset of 46 subjects. Results Significantly stronger between‐tracer correlations (P < .001) were observed after harmonization for both global amyloid burden indices and voxel‐wise measurements in the training cohort and the external testing cohort. Discussion We proposed and validated a novel encoder‐decoder based deep model to harmonize amyloid PET imaging data from different tracers. Further investigation is ongoing to improve the model and apply to additional tracers.
AbstractList Introduction Multiple positron emission tomography (PET) tracers are available for amyloid imaging, posing a significant challenge to consensus interpretation and quantitative analysis. We accordingly developed and validated a deep learning model as a harmonization strategy. Method A Residual Inception Encoder‐Decoder Neural Network was developed to harmonize images between amyloid PET image pairs made with Pittsburgh Compound‐B and florbetapir tracers. The model was trained using a dataset with 92 subjects with 10‐fold cross validation and its generalizability was further examined using an independent external dataset of 46 subjects. Results Significantly stronger between‐tracer correlations (P < .001) were observed after harmonization for both global amyloid burden indices and voxel‐wise measurements in the training cohort and the external testing cohort. Discussion We proposed and validated a novel encoder‐decoder based deep model to harmonize amyloid PET imaging data from different tracers. Further investigation is ongoing to improve the model and apply to additional tracers.
Multiple positron emission tomography (PET) tracers are available for amyloid imaging, posing a significant challenge to consensus interpretation and quantitative analysis. We accordingly developed and validated a deep learning model as a harmonization strategy. A Residual Inception Encoder-Decoder Neural Network was developed to harmonize images between amyloid PET image pairs made with Pittsburgh Compound-B and florbetapir tracers. The model was trained using a dataset with 92 subjects with 10-fold cross validation and its generalizability was further examined using an independent external dataset of 46 subjects. Significantly stronger between-tracer correlations (P < .001) were observed after harmonization for both global amyloid burden indices and voxel-wise measurements in the training cohort and the external testing cohort. We proposed and validated a novel encoder-decoder based deep model to harmonize amyloid PET imaging data from different tracers. Further investigation is ongoing to improve the model and apply to additional tracers.
Multiple positron emission tomography (PET) tracers are available for amyloid imaging, posing a significant challenge to consensus interpretation and quantitative analysis. We accordingly developed and validated a deep learning model as a harmonization strategy.INTRODUCTIONMultiple positron emission tomography (PET) tracers are available for amyloid imaging, posing a significant challenge to consensus interpretation and quantitative analysis. We accordingly developed and validated a deep learning model as a harmonization strategy.A Residual Inception Encoder-Decoder Neural Network was developed to harmonize images between amyloid PET image pairs made with Pittsburgh Compound-B and florbetapir tracers. The model was trained using a dataset with 92 subjects with 10-fold cross validation and its generalizability was further examined using an independent external dataset of 46 subjects.METHODA Residual Inception Encoder-Decoder Neural Network was developed to harmonize images between amyloid PET image pairs made with Pittsburgh Compound-B and florbetapir tracers. The model was trained using a dataset with 92 subjects with 10-fold cross validation and its generalizability was further examined using an independent external dataset of 46 subjects.Significantly stronger between-tracer correlations (P < .001) were observed after harmonization for both global amyloid burden indices and voxel-wise measurements in the training cohort and the external testing cohort.RESULTSSignificantly stronger between-tracer correlations (P < .001) were observed after harmonization for both global amyloid burden indices and voxel-wise measurements in the training cohort and the external testing cohort.We proposed and validated a novel encoder-decoder based deep model to harmonize amyloid PET imaging data from different tracers. Further investigation is ongoing to improve the model and apply to additional tracers.DISCUSSIONWe proposed and validated a novel encoder-decoder based deep model to harmonize amyloid PET imaging data from different tracers. Further investigation is ongoing to improve the model and apply to additional tracers.
Author Su, Yi
Ghisays, Valentina
Shah, Jay
Luo, Ji
Chen, Kewei
Benzinger, Tammie L.S.
Gao, Fei
Chen, Yinghua
Reiman, Eric M.
Wu, Teresa
Zhou, Yuxiang
Li, Baoxin
Lee, Wendy
AuthorAffiliation 5 Mallinckrodt Institute of Radiology Washington University School of Medicine in St. Louis 510 South Kingshighway Boulevard St. Louis Missouri 63110 USA
1 ASU‐Mayo Center for Innovative Imaging Arizona State University 699 S. Mill Ave. Tempe Arizona 85287 USA
4 Department of Radiology Mayo Clinic at Arizona 5777 E Mayo Blvd Phoenix Arizona 85054 USA
2 School of Computing and Augmented Intelligence Arizona State University 699 S. Mill Ave. Tempe Arizona 85287 USA
3 Banner Alzheimer's Institute 901 E. Willetta Street Phoenix Arizona 85006 USA
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Issue 12
Keywords Alzheimer's disease
Centiloid
amyloid PET
Language English
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This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
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Notes Yi Su and Teresa Wu contributed equally to this work.
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Snippet Introduction Multiple positron emission tomography (PET) tracers are available for amyloid imaging, posing a significant challenge to consensus interpretation...
Multiple positron emission tomography (PET) tracers are available for amyloid imaging, posing a significant challenge to consensus interpretation and...
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SubjectTerms Alzheimer Disease - diagnostic imaging
Alzheimer's disease
Amyloid - metabolism
amyloid PET
Amyloidogenic Proteins
Aniline Compounds
Brain - diagnostic imaging
Brain - metabolism
Centiloid
Humans
Positron-Emission Tomography - methods
Radiopharmaceuticals
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Title Deep residual inception encoder‐decoder network for amyloid PET harmonization
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