Robust spatial fuzzy GMM based MRI segmentation and carotid artery plaque detection in ultrasound images

•A novel approach comprised of fuzzy intelligence and GMM has been proposed for segmentation of brain MRI and carotid artery ultrasound images.•It utilizes statistical, wavelet, and textural features.•Robustness of the approach has been evaluated at Gaussian and Rician noise levels.•Application of t...

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Published inComputer methods and programs in biomedicine Vol. 175; pp. 179 - 192
Main Authors Hassan, Mehdi, Murtza, Iqbal, Hira, Aysha, Ali, Safdar, Kifayat, Kashif
Format Journal Article
LanguageEnglish
Published Ireland Elsevier B.V 01.07.2019
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ISSN0169-2607
1872-7565
1872-7565
DOI10.1016/j.cmpb.2019.04.026

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Abstract •A novel approach comprised of fuzzy intelligence and GMM has been proposed for segmentation of brain MRI and carotid artery ultrasound images.•It utilizes statistical, wavelet, and textural features.•Robustness of the approach has been evaluated at Gaussian and Rician noise levels.•Application of the proposed approach to plaque detection in real carotid artery ultrasound images is assessed.•Benefit for clinical evaluation of the disease in both asymptomatic and symptomatic individuals. In medical image analysis for disease diagnosis, segmentation is one of the challenging tasks. Owing to the inherited degradations in MRI improper segments are produced. Segmentation process is an important step in brain tissue analysis. Moreover, an early detection of plaque in carotid artery using ultrasound images may prevent serious brain strokes. Unfortunately, low quality and noisy ultrasound images are still challenges for accurate segmentation. The objective of this research is to develop a robust segmentation approach for medical images such as brain MRI and carotid artery ultrasound images. In this paper, a novel approach is proposed to address the segmentation challenges of medical images. The proposed approach employed fuzzy intelligence and Gaussian mixture model (GMM). It comprises two phases; firstly, incorporating spatial fuzzy c-means in GMM by exploiting statistical, texture, and wavelet image features. During model development, GMM parameters are estimated in presence of noise by EM algorithm iteratively. Utilizing these parameters, brain MRI images are segmented. In next phase, developed approach is applied to solve a real problem of carotid artery plaque detection using ultrasound images. The dataset of real patients annotated by radiologists has been obtained from Radiology Department, Shifa International Hospital Islamabad, Pakistan. For this, intima-media-thickness values are computed from the proposed segmentation followed by support vector machines for plaque classification (normal/abnormal). The obtained segmentation has been evaluated on standard brain MRI dataset and offers high segmentation accuracy of 99.2%. The proposed approach outperforms in term of segmentation performance range of 3–9% as compared to the state of the art approaches on brain MRI. Furthermore, the proposed approach shows robustness to various levels of Gaussian and Rician image noises. On carotid artery dataset, we have obtained high plaque detection rate in terms of accuracy, sensitivity, specificity, and F-score values of 98.8%, 99.3%, 98.0%, and 97.5% respectively. The proposed approach segments both modalities with high precision and shows robustness at Gaussian and Rician noise levels. Results for brain MRI and ultrasound images indicate its effectiveness and can be used as second opinion in addition to the radiologists. The developed approach is straightforward, efficient, and reproducible. It may benefit to improve the clinical evaluation of the disease in both asymptomatic and symptomatic individuals.
AbstractList •A novel approach comprised of fuzzy intelligence and GMM has been proposed for segmentation of brain MRI and carotid artery ultrasound images.•It utilizes statistical, wavelet, and textural features.•Robustness of the approach has been evaluated at Gaussian and Rician noise levels.•Application of the proposed approach to plaque detection in real carotid artery ultrasound images is assessed.•Benefit for clinical evaluation of the disease in both asymptomatic and symptomatic individuals. In medical image analysis for disease diagnosis, segmentation is one of the challenging tasks. Owing to the inherited degradations in MRI improper segments are produced. Segmentation process is an important step in brain tissue analysis. Moreover, an early detection of plaque in carotid artery using ultrasound images may prevent serious brain strokes. Unfortunately, low quality and noisy ultrasound images are still challenges for accurate segmentation. The objective of this research is to develop a robust segmentation approach for medical images such as brain MRI and carotid artery ultrasound images. In this paper, a novel approach is proposed to address the segmentation challenges of medical images. The proposed approach employed fuzzy intelligence and Gaussian mixture model (GMM). It comprises two phases; firstly, incorporating spatial fuzzy c-means in GMM by exploiting statistical, texture, and wavelet image features. During model development, GMM parameters are estimated in presence of noise by EM algorithm iteratively. Utilizing these parameters, brain MRI images are segmented. In next phase, developed approach is applied to solve a real problem of carotid artery plaque detection using ultrasound images. The dataset of real patients annotated by radiologists has been obtained from Radiology Department, Shifa International Hospital Islamabad, Pakistan. For this, intima-media-thickness values are computed from the proposed segmentation followed by support vector machines for plaque classification (normal/abnormal). The obtained segmentation has been evaluated on standard brain MRI dataset and offers high segmentation accuracy of 99.2%. The proposed approach outperforms in term of segmentation performance range of 3–9% as compared to the state of the art approaches on brain MRI. Furthermore, the proposed approach shows robustness to various levels of Gaussian and Rician image noises. On carotid artery dataset, we have obtained high plaque detection rate in terms of accuracy, sensitivity, specificity, and F-score values of 98.8%, 99.3%, 98.0%, and 97.5% respectively. The proposed approach segments both modalities with high precision and shows robustness at Gaussian and Rician noise levels. Results for brain MRI and ultrasound images indicate its effectiveness and can be used as second opinion in addition to the radiologists. The developed approach is straightforward, efficient, and reproducible. It may benefit to improve the clinical evaluation of the disease in both asymptomatic and symptomatic individuals.
In medical image analysis for disease diagnosis, segmentation is one of the challenging tasks. Owing to the inherited degradations in MRI improper segments are produced. Segmentation process is an important step in brain tissue analysis. Moreover, an early detection of plaque in carotid artery using ultrasound images may prevent serious brain strokes. Unfortunately, low quality and noisy ultrasound images are still challenges for accurate segmentation. The objective of this research is to develop a robust segmentation approach for medical images such as brain MRI and carotid artery ultrasound images.BACKGROUND AND OBJECTIVEIn medical image analysis for disease diagnosis, segmentation is one of the challenging tasks. Owing to the inherited degradations in MRI improper segments are produced. Segmentation process is an important step in brain tissue analysis. Moreover, an early detection of plaque in carotid artery using ultrasound images may prevent serious brain strokes. Unfortunately, low quality and noisy ultrasound images are still challenges for accurate segmentation. The objective of this research is to develop a robust segmentation approach for medical images such as brain MRI and carotid artery ultrasound images.In this paper, a novel approach is proposed to address the segmentation challenges of medical images. The proposed approach employed fuzzy intelligence and Gaussian mixture model (GMM). It comprises two phases; firstly, incorporating spatial fuzzy c-means in GMM by exploiting statistical, texture, and wavelet image features. During model development, GMM parameters are estimated in presence of noise by EM algorithm iteratively. Utilizing these parameters, brain MRI images are segmented. In next phase, developed approach is applied to solve a real problem of carotid artery plaque detection using ultrasound images. The dataset of real patients annotated by radiologists has been obtained from Radiology Department, Shifa International Hospital Islamabad, Pakistan. For this, intima-media-thickness values are computed from the proposed segmentation followed by support vector machines for plaque classification (normal/abnormal).METHODSIn this paper, a novel approach is proposed to address the segmentation challenges of medical images. The proposed approach employed fuzzy intelligence and Gaussian mixture model (GMM). It comprises two phases; firstly, incorporating spatial fuzzy c-means in GMM by exploiting statistical, texture, and wavelet image features. During model development, GMM parameters are estimated in presence of noise by EM algorithm iteratively. Utilizing these parameters, brain MRI images are segmented. In next phase, developed approach is applied to solve a real problem of carotid artery plaque detection using ultrasound images. The dataset of real patients annotated by radiologists has been obtained from Radiology Department, Shifa International Hospital Islamabad, Pakistan. For this, intima-media-thickness values are computed from the proposed segmentation followed by support vector machines for plaque classification (normal/abnormal).The obtained segmentation has been evaluated on standard brain MRI dataset and offers high segmentation accuracy of 99.2%. The proposed approach outperforms in term of segmentation performance range of 3-9% as compared to the state of the art approaches on brain MRI. Furthermore, the proposed approach shows robustness to various levels of Gaussian and Rician image noises. On carotid artery dataset, we have obtained high plaque detection rate in terms of accuracy, sensitivity, specificity, and F-score values of 98.8%, 99.3%, 98.0%, and 97.5% respectively.RESULTSThe obtained segmentation has been evaluated on standard brain MRI dataset and offers high segmentation accuracy of 99.2%. The proposed approach outperforms in term of segmentation performance range of 3-9% as compared to the state of the art approaches on brain MRI. Furthermore, the proposed approach shows robustness to various levels of Gaussian and Rician image noises. On carotid artery dataset, we have obtained high plaque detection rate in terms of accuracy, sensitivity, specificity, and F-score values of 98.8%, 99.3%, 98.0%, and 97.5% respectively.The proposed approach segments both modalities with high precision and shows robustness at Gaussian and Rician noise levels. Results for brain MRI and ultrasound images indicate its effectiveness and can be used as second opinion in addition to the radiologists. The developed approach is straightforward, efficient, and reproducible. It may benefit to improve the clinical evaluation of the disease in both asymptomatic and symptomatic individuals.CONCLUSIONSThe proposed approach segments both modalities with high precision and shows robustness at Gaussian and Rician noise levels. Results for brain MRI and ultrasound images indicate its effectiveness and can be used as second opinion in addition to the radiologists. The developed approach is straightforward, efficient, and reproducible. It may benefit to improve the clinical evaluation of the disease in both asymptomatic and symptomatic individuals.
In medical image analysis for disease diagnosis, segmentation is one of the challenging tasks. Owing to the inherited degradations in MRI improper segments are produced. Segmentation process is an important step in brain tissue analysis. Moreover, an early detection of plaque in carotid artery using ultrasound images may prevent serious brain strokes. Unfortunately, low quality and noisy ultrasound images are still challenges for accurate segmentation. The objective of this research is to develop a robust segmentation approach for medical images such as brain MRI and carotid artery ultrasound images. In this paper, a novel approach is proposed to address the segmentation challenges of medical images. The proposed approach employed fuzzy intelligence and Gaussian mixture model (GMM). It comprises two phases; firstly, incorporating spatial fuzzy c-means in GMM by exploiting statistical, texture, and wavelet image features. During model development, GMM parameters are estimated in presence of noise by EM algorithm iteratively. Utilizing these parameters, brain MRI images are segmented. In next phase, developed approach is applied to solve a real problem of carotid artery plaque detection using ultrasound images. The dataset of real patients annotated by radiologists has been obtained from Radiology Department, Shifa International Hospital Islamabad, Pakistan. For this, intima-media-thickness values are computed from the proposed segmentation followed by support vector machines for plaque classification (normal/abnormal). The obtained segmentation has been evaluated on standard brain MRI dataset and offers high segmentation accuracy of 99.2%. The proposed approach outperforms in term of segmentation performance range of 3-9% as compared to the state of the art approaches on brain MRI. Furthermore, the proposed approach shows robustness to various levels of Gaussian and Rician image noises. On carotid artery dataset, we have obtained high plaque detection rate in terms of accuracy, sensitivity, specificity, and F-score values of 98.8%, 99.3%, 98.0%, and 97.5% respectively. The proposed approach segments both modalities with high precision and shows robustness at Gaussian and Rician noise levels. Results for brain MRI and ultrasound images indicate its effectiveness and can be used as second opinion in addition to the radiologists. The developed approach is straightforward, efficient, and reproducible. It may benefit to improve the clinical evaluation of the disease in both asymptomatic and symptomatic individuals.
Author Kifayat, Kashif
Ali, Safdar
Murtza, Iqbal
Hassan, Mehdi
Hira, Aysha
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Keywords Expectation maximization
SVM
Soft clustering
GMM
Carotid Plaque
Language English
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SSID ssj0002556
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Snippet •A novel approach comprised of fuzzy intelligence and GMM has been proposed for segmentation of brain MRI and carotid artery ultrasound images.•It utilizes...
In medical image analysis for disease diagnosis, segmentation is one of the challenging tasks. Owing to the inherited degradations in MRI improper segments are...
SourceID proquest
pubmed
crossref
elsevier
SourceType Aggregation Database
Index Database
Enrichment Source
Publisher
StartPage 179
SubjectTerms Adult
Aged
Algorithms
Brain - diagnostic imaging
Carotid Arteries - diagnostic imaging
Carotid Plaque
Carotid Stenosis - diagnostic imaging
Databases, Factual
Expectation maximization
False Positive Reactions
Fuzzy Logic
GMM
Humans
Image Processing, Computer-Assisted - methods
Magnetic Resonance Imaging
Middle Aged
Models, Statistical
Normal Distribution
Reproducibility of Results
Soft clustering
SVM
Ultrasonography
Title Robust spatial fuzzy GMM based MRI segmentation and carotid artery plaque detection in ultrasound images
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https://dx.doi.org/10.1016/j.cmpb.2019.04.026
https://www.ncbi.nlm.nih.gov/pubmed/31104706
https://www.proquest.com/docview/2232085983
Volume 175
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