Robust spatial fuzzy GMM based MRI segmentation and carotid artery plaque detection in ultrasound images
•A novel approach comprised of fuzzy intelligence and GMM has been proposed for segmentation of brain MRI and carotid artery ultrasound images.•It utilizes statistical, wavelet, and textural features.•Robustness of the approach has been evaluated at Gaussian and Rician noise levels.•Application of t...
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| Published in | Computer methods and programs in biomedicine Vol. 175; pp. 179 - 192 |
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| Main Authors | , , , , |
| Format | Journal Article |
| Language | English |
| Published |
Ireland
Elsevier B.V
01.07.2019
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| Subjects | |
| Online Access | Get full text |
| ISSN | 0169-2607 1872-7565 1872-7565 |
| DOI | 10.1016/j.cmpb.2019.04.026 |
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| Abstract | •A novel approach comprised of fuzzy intelligence and GMM has been proposed for segmentation of brain MRI and carotid artery ultrasound images.•It utilizes statistical, wavelet, and textural features.•Robustness of the approach has been evaluated at Gaussian and Rician noise levels.•Application of the proposed approach to plaque detection in real carotid artery ultrasound images is assessed.•Benefit for clinical evaluation of the disease in both asymptomatic and symptomatic individuals.
In medical image analysis for disease diagnosis, segmentation is one of the challenging tasks. Owing to the inherited degradations in MRI improper segments are produced. Segmentation process is an important step in brain tissue analysis. Moreover, an early detection of plaque in carotid artery using ultrasound images may prevent serious brain strokes. Unfortunately, low quality and noisy ultrasound images are still challenges for accurate segmentation. The objective of this research is to develop a robust segmentation approach for medical images such as brain MRI and carotid artery ultrasound images.
In this paper, a novel approach is proposed to address the segmentation challenges of medical images. The proposed approach employed fuzzy intelligence and Gaussian mixture model (GMM). It comprises two phases; firstly, incorporating spatial fuzzy c-means in GMM by exploiting statistical, texture, and wavelet image features. During model development, GMM parameters are estimated in presence of noise by EM algorithm iteratively. Utilizing these parameters, brain MRI images are segmented. In next phase, developed approach is applied to solve a real problem of carotid artery plaque detection using ultrasound images. The dataset of real patients annotated by radiologists has been obtained from Radiology Department, Shifa International Hospital Islamabad, Pakistan. For this, intima-media-thickness values are computed from the proposed segmentation followed by support vector machines for plaque classification (normal/abnormal).
The obtained segmentation has been evaluated on standard brain MRI dataset and offers high segmentation accuracy of 99.2%. The proposed approach outperforms in term of segmentation performance range of 3–9% as compared to the state of the art approaches on brain MRI. Furthermore, the proposed approach shows robustness to various levels of Gaussian and Rician image noises. On carotid artery dataset, we have obtained high plaque detection rate in terms of accuracy, sensitivity, specificity, and F-score values of 98.8%, 99.3%, 98.0%, and 97.5% respectively.
The proposed approach segments both modalities with high precision and shows robustness at Gaussian and Rician noise levels. Results for brain MRI and ultrasound images indicate its effectiveness and can be used as second opinion in addition to the radiologists. The developed approach is straightforward, efficient, and reproducible. It may benefit to improve the clinical evaluation of the disease in both asymptomatic and symptomatic individuals. |
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| AbstractList | •A novel approach comprised of fuzzy intelligence and GMM has been proposed for segmentation of brain MRI and carotid artery ultrasound images.•It utilizes statistical, wavelet, and textural features.•Robustness of the approach has been evaluated at Gaussian and Rician noise levels.•Application of the proposed approach to plaque detection in real carotid artery ultrasound images is assessed.•Benefit for clinical evaluation of the disease in both asymptomatic and symptomatic individuals.
In medical image analysis for disease diagnosis, segmentation is one of the challenging tasks. Owing to the inherited degradations in MRI improper segments are produced. Segmentation process is an important step in brain tissue analysis. Moreover, an early detection of plaque in carotid artery using ultrasound images may prevent serious brain strokes. Unfortunately, low quality and noisy ultrasound images are still challenges for accurate segmentation. The objective of this research is to develop a robust segmentation approach for medical images such as brain MRI and carotid artery ultrasound images.
In this paper, a novel approach is proposed to address the segmentation challenges of medical images. The proposed approach employed fuzzy intelligence and Gaussian mixture model (GMM). It comprises two phases; firstly, incorporating spatial fuzzy c-means in GMM by exploiting statistical, texture, and wavelet image features. During model development, GMM parameters are estimated in presence of noise by EM algorithm iteratively. Utilizing these parameters, brain MRI images are segmented. In next phase, developed approach is applied to solve a real problem of carotid artery plaque detection using ultrasound images. The dataset of real patients annotated by radiologists has been obtained from Radiology Department, Shifa International Hospital Islamabad, Pakistan. For this, intima-media-thickness values are computed from the proposed segmentation followed by support vector machines for plaque classification (normal/abnormal).
The obtained segmentation has been evaluated on standard brain MRI dataset and offers high segmentation accuracy of 99.2%. The proposed approach outperforms in term of segmentation performance range of 3–9% as compared to the state of the art approaches on brain MRI. Furthermore, the proposed approach shows robustness to various levels of Gaussian and Rician image noises. On carotid artery dataset, we have obtained high plaque detection rate in terms of accuracy, sensitivity, specificity, and F-score values of 98.8%, 99.3%, 98.0%, and 97.5% respectively.
The proposed approach segments both modalities with high precision and shows robustness at Gaussian and Rician noise levels. Results for brain MRI and ultrasound images indicate its effectiveness and can be used as second opinion in addition to the radiologists. The developed approach is straightforward, efficient, and reproducible. It may benefit to improve the clinical evaluation of the disease in both asymptomatic and symptomatic individuals. In medical image analysis for disease diagnosis, segmentation is one of the challenging tasks. Owing to the inherited degradations in MRI improper segments are produced. Segmentation process is an important step in brain tissue analysis. Moreover, an early detection of plaque in carotid artery using ultrasound images may prevent serious brain strokes. Unfortunately, low quality and noisy ultrasound images are still challenges for accurate segmentation. The objective of this research is to develop a robust segmentation approach for medical images such as brain MRI and carotid artery ultrasound images.BACKGROUND AND OBJECTIVEIn medical image analysis for disease diagnosis, segmentation is one of the challenging tasks. Owing to the inherited degradations in MRI improper segments are produced. Segmentation process is an important step in brain tissue analysis. Moreover, an early detection of plaque in carotid artery using ultrasound images may prevent serious brain strokes. Unfortunately, low quality and noisy ultrasound images are still challenges for accurate segmentation. The objective of this research is to develop a robust segmentation approach for medical images such as brain MRI and carotid artery ultrasound images.In this paper, a novel approach is proposed to address the segmentation challenges of medical images. The proposed approach employed fuzzy intelligence and Gaussian mixture model (GMM). It comprises two phases; firstly, incorporating spatial fuzzy c-means in GMM by exploiting statistical, texture, and wavelet image features. During model development, GMM parameters are estimated in presence of noise by EM algorithm iteratively. Utilizing these parameters, brain MRI images are segmented. In next phase, developed approach is applied to solve a real problem of carotid artery plaque detection using ultrasound images. The dataset of real patients annotated by radiologists has been obtained from Radiology Department, Shifa International Hospital Islamabad, Pakistan. For this, intima-media-thickness values are computed from the proposed segmentation followed by support vector machines for plaque classification (normal/abnormal).METHODSIn this paper, a novel approach is proposed to address the segmentation challenges of medical images. The proposed approach employed fuzzy intelligence and Gaussian mixture model (GMM). It comprises two phases; firstly, incorporating spatial fuzzy c-means in GMM by exploiting statistical, texture, and wavelet image features. During model development, GMM parameters are estimated in presence of noise by EM algorithm iteratively. Utilizing these parameters, brain MRI images are segmented. In next phase, developed approach is applied to solve a real problem of carotid artery plaque detection using ultrasound images. The dataset of real patients annotated by radiologists has been obtained from Radiology Department, Shifa International Hospital Islamabad, Pakistan. For this, intima-media-thickness values are computed from the proposed segmentation followed by support vector machines for plaque classification (normal/abnormal).The obtained segmentation has been evaluated on standard brain MRI dataset and offers high segmentation accuracy of 99.2%. The proposed approach outperforms in term of segmentation performance range of 3-9% as compared to the state of the art approaches on brain MRI. Furthermore, the proposed approach shows robustness to various levels of Gaussian and Rician image noises. On carotid artery dataset, we have obtained high plaque detection rate in terms of accuracy, sensitivity, specificity, and F-score values of 98.8%, 99.3%, 98.0%, and 97.5% respectively.RESULTSThe obtained segmentation has been evaluated on standard brain MRI dataset and offers high segmentation accuracy of 99.2%. The proposed approach outperforms in term of segmentation performance range of 3-9% as compared to the state of the art approaches on brain MRI. Furthermore, the proposed approach shows robustness to various levels of Gaussian and Rician image noises. On carotid artery dataset, we have obtained high plaque detection rate in terms of accuracy, sensitivity, specificity, and F-score values of 98.8%, 99.3%, 98.0%, and 97.5% respectively.The proposed approach segments both modalities with high precision and shows robustness at Gaussian and Rician noise levels. Results for brain MRI and ultrasound images indicate its effectiveness and can be used as second opinion in addition to the radiologists. The developed approach is straightforward, efficient, and reproducible. It may benefit to improve the clinical evaluation of the disease in both asymptomatic and symptomatic individuals.CONCLUSIONSThe proposed approach segments both modalities with high precision and shows robustness at Gaussian and Rician noise levels. Results for brain MRI and ultrasound images indicate its effectiveness and can be used as second opinion in addition to the radiologists. The developed approach is straightforward, efficient, and reproducible. It may benefit to improve the clinical evaluation of the disease in both asymptomatic and symptomatic individuals. In medical image analysis for disease diagnosis, segmentation is one of the challenging tasks. Owing to the inherited degradations in MRI improper segments are produced. Segmentation process is an important step in brain tissue analysis. Moreover, an early detection of plaque in carotid artery using ultrasound images may prevent serious brain strokes. Unfortunately, low quality and noisy ultrasound images are still challenges for accurate segmentation. The objective of this research is to develop a robust segmentation approach for medical images such as brain MRI and carotid artery ultrasound images. In this paper, a novel approach is proposed to address the segmentation challenges of medical images. The proposed approach employed fuzzy intelligence and Gaussian mixture model (GMM). It comprises two phases; firstly, incorporating spatial fuzzy c-means in GMM by exploiting statistical, texture, and wavelet image features. During model development, GMM parameters are estimated in presence of noise by EM algorithm iteratively. Utilizing these parameters, brain MRI images are segmented. In next phase, developed approach is applied to solve a real problem of carotid artery plaque detection using ultrasound images. The dataset of real patients annotated by radiologists has been obtained from Radiology Department, Shifa International Hospital Islamabad, Pakistan. For this, intima-media-thickness values are computed from the proposed segmentation followed by support vector machines for plaque classification (normal/abnormal). The obtained segmentation has been evaluated on standard brain MRI dataset and offers high segmentation accuracy of 99.2%. The proposed approach outperforms in term of segmentation performance range of 3-9% as compared to the state of the art approaches on brain MRI. Furthermore, the proposed approach shows robustness to various levels of Gaussian and Rician image noises. On carotid artery dataset, we have obtained high plaque detection rate in terms of accuracy, sensitivity, specificity, and F-score values of 98.8%, 99.3%, 98.0%, and 97.5% respectively. The proposed approach segments both modalities with high precision and shows robustness at Gaussian and Rician noise levels. Results for brain MRI and ultrasound images indicate its effectiveness and can be used as second opinion in addition to the radiologists. The developed approach is straightforward, efficient, and reproducible. It may benefit to improve the clinical evaluation of the disease in both asymptomatic and symptomatic individuals. |
| Author | Kifayat, Kashif Ali, Safdar Murtza, Iqbal Hassan, Mehdi Hira, Aysha |
| Author_xml | – sequence: 1 givenname: Mehdi surname: Hassan fullname: Hassan, Mehdi email: mehdi.hassan@mail.au.edu.pk organization: Department of Computer Science, Air University Sector E-9, PAF Complex, Islamabad, Pakistan – sequence: 2 givenname: Iqbal surname: Murtza fullname: Murtza, Iqbal organization: Department of Computer Science, Air University Sector E-9, PAF Complex, Islamabad, Pakistan – sequence: 3 givenname: Aysha surname: Hira fullname: Hira, Aysha organization: Department of Computer Science, Air University Sector E-9, PAF Complex, Islamabad, Pakistan – sequence: 4 givenname: Safdar surname: Ali fullname: Ali, Safdar organization: Directorate General National Repository, Islamabad, Pakistan – sequence: 5 givenname: Kashif surname: Kifayat fullname: Kifayat, Kashif organization: Department of Computer Science, Air University Sector E-9, PAF Complex, Islamabad, Pakistan |
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| Keywords | Expectation maximization SVM Soft clustering GMM Carotid Plaque |
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| Snippet | •A novel approach comprised of fuzzy intelligence and GMM has been proposed for segmentation of brain MRI and carotid artery ultrasound images.•It utilizes... In medical image analysis for disease diagnosis, segmentation is one of the challenging tasks. Owing to the inherited degradations in MRI improper segments are... |
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| SubjectTerms | Adult Aged Algorithms Brain - diagnostic imaging Carotid Arteries - diagnostic imaging Carotid Plaque Carotid Stenosis - diagnostic imaging Databases, Factual Expectation maximization False Positive Reactions Fuzzy Logic GMM Humans Image Processing, Computer-Assisted - methods Magnetic Resonance Imaging Middle Aged Models, Statistical Normal Distribution Reproducibility of Results Soft clustering SVM Ultrasonography |
| Title | Robust spatial fuzzy GMM based MRI segmentation and carotid artery plaque detection in ultrasound images |
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