Genetic confirmation of T2DM meta-analysis variants studied in gestational diabetes mellitus in an Indian population
Meta-analysis is useful for combining the results of different studies statistically to confirm genuine associations in genetics. Based on earlier reports, we aimed to investigate the association between type 2 diabetes mellitus (T2DM) genetic variants identified in a previous meta-analysis in gesta...
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Published in | Diabetes & metabolic syndrome clinical research & reviews Vol. 13; no. 1; pp. 688 - 694 |
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Main Authors | , , , |
Format | Journal Article |
Language | English |
Published |
Netherlands
Elsevier Ltd
01.01.2019
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Online Access | Get full text |
ISSN | 1871-4021 1878-0334 1878-0334 |
DOI | 10.1016/j.dsx.2018.11.035 |
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Abstract | Meta-analysis is useful for combining the results of different studies statistically to confirm genuine associations in genetics. Based on earlier reports, we aimed to investigate the association between type 2 diabetes mellitus (T2DM) genetic variants identified in a previous meta-analysis in gestational diabetes mellitus (GDM) in an Indian woman.
In this study, 137 pregnant women with GDM and 150 pregnant women were selected on the basis of their serum glucose levels. The six single nucleotide polymorphisms (SNPs) of different genes studied had known involvement in pancreatic β-cell function, particular pathways linked to T2DM, and other biological functions. Genomic DNA was isolated from the 287 women for polymerase chain reaction and restriction fragment length polymorphism analyses.
The rs7903146, rs13266634, rs2283228, rs5210 and rs179881 SNPs were found to be positively associated with GDM when calculated for genotype and allele frequencies (p < 0.05), but rs680 (ApaI) variant did not show statistically significant association (p = 0.31). The rs7903146, rs2283228, rs5210 and rs680 variants showed a strong association with oral glucose tolerance test values.
The SNPs studied in this GDM had the same role as those identified in a previous T2DM meta-analysis, and showed positive association in the Indian women. Meta-analyses should be implemented to assess the IGF2 gene in GDM subjects. |
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AbstractList | Meta-analysis is useful for combining the results of different studies statistically to confirm genuine associations in genetics. Based on earlier reports, we aimed to investigate the association between type 2 diabetes mellitus (T2DM) genetic variants identified in a previous meta-analysis in gestational diabetes mellitus (GDM) in an Indian woman.
In this study, 137 pregnant women with GDM and 150 pregnant women were selected on the basis of their serum glucose levels. The six single nucleotide polymorphisms (SNPs) of different genes studied had known involvement in pancreatic β-cell function, particular pathways linked to T2DM, and other biological functions. Genomic DNA was isolated from the 287 women for polymerase chain reaction and restriction fragment length polymorphism analyses.
The rs7903146, rs13266634, rs2283228, rs5210 and rs179881 SNPs were found to be positively associated with GDM when calculated for genotype and allele frequencies (p < 0.05), but rs680 (ApaI) variant did not show statistically significant association (p = 0.31). The rs7903146, rs2283228, rs5210 and rs680 variants showed a strong association with oral glucose tolerance test values.
The SNPs studied in this GDM had the same role as those identified in a previous T2DM meta-analysis, and showed positive association in the Indian women. Meta-analyses should be implemented to assess the IGF2 gene in GDM subjects. Meta-analysis is useful for combining the results of different studies statistically to confirm genuine associations in genetics. Based on earlier reports, we aimed to investigate the association between type 2 diabetes mellitus (T2DM) genetic variants identified in a previous meta-analysis in gestational diabetes mellitus (GDM) in an Indian woman.BACKGROUNDMeta-analysis is useful for combining the results of different studies statistically to confirm genuine associations in genetics. Based on earlier reports, we aimed to investigate the association between type 2 diabetes mellitus (T2DM) genetic variants identified in a previous meta-analysis in gestational diabetes mellitus (GDM) in an Indian woman.In this study, 137 pregnant women with GDM and 150 pregnant women were selected on the basis of their serum glucose levels. The six single nucleotide polymorphisms (SNPs) of different genes studied had known involvement in pancreatic β-cell function, particular pathways linked to T2DM, and other biological functions. Genomic DNA was isolated from the 287 women for polymerase chain reaction and restriction fragment length polymorphism analyses.MATERIAL AND METHODSIn this study, 137 pregnant women with GDM and 150 pregnant women were selected on the basis of their serum glucose levels. The six single nucleotide polymorphisms (SNPs) of different genes studied had known involvement in pancreatic β-cell function, particular pathways linked to T2DM, and other biological functions. Genomic DNA was isolated from the 287 women for polymerase chain reaction and restriction fragment length polymorphism analyses.The rs7903146, rs13266634, rs2283228, rs5210 and rs179881 SNPs were found to be positively associated with GDM when calculated for genotype and allele frequencies (p < 0.05), but rs680 (ApaI) variant did not show statistically significant association (p = 0.31). The rs7903146, rs2283228, rs5210 and rs680 variants showed a strong association with oral glucose tolerance test values.RESULTSThe rs7903146, rs13266634, rs2283228, rs5210 and rs179881 SNPs were found to be positively associated with GDM when calculated for genotype and allele frequencies (p < 0.05), but rs680 (ApaI) variant did not show statistically significant association (p = 0.31). The rs7903146, rs2283228, rs5210 and rs680 variants showed a strong association with oral glucose tolerance test values.The SNPs studied in this GDM had the same role as those identified in a previous T2DM meta-analysis, and showed positive association in the Indian women. Meta-analyses should be implemented to assess the IGF2 gene in GDM subjects.CONCLUSIONThe SNPs studied in this GDM had the same role as those identified in a previous T2DM meta-analysis, and showed positive association in the Indian women. Meta-analyses should be implemented to assess the IGF2 gene in GDM subjects. |
Author | Rao, Pragna Khan, Imran Ali Jahan, Parveen Hasan, Qurratulain |
Author_xml | – sequence: 1 givenname: Imran Ali surname: Khan fullname: Khan, Imran Ali organization: Department of Genetics and Molecular Medicine, Kamineni Hospitals, LB Nagar, Hyderabad, India – sequence: 2 givenname: Parveen surname: Jahan fullname: Jahan, Parveen organization: Department of Genetics and Biotechnology, Osmania University, Tarnaka, Hyderabad, India – sequence: 3 givenname: Qurratulain surname: Hasan fullname: Hasan, Qurratulain organization: Department of Genetics and Molecular Medicine, Kamineni Hospitals, LB Nagar, Hyderabad, India – sequence: 4 givenname: Pragna orcidid: 0000-0002-1200-889X surname: Rao fullname: Rao, Pragna email: drpragnarao@gmail.com organization: Department of Biochemistry, Kasturba Medical College, Manipal University, Manipal, Karnataka, India |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/30641791$$D View this record in MEDLINE/PubMed |
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Keywords | Gestational diabetes mellitus Oral glucose tolerance test Single nucleotide polymorphisms Pregnant women Non- gestational diabetes mellitus Meta-analysis |
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Snippet | Meta-analysis is useful for combining the results of different studies statistically to confirm genuine associations in genetics. Based on earlier reports, we... |
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SubjectTerms | Blood Glucose Diabetes Mellitus, Type 2 - genetics Diabetes, Gestational - genetics Female Gene Frequency Genotype Gestational diabetes mellitus Humans Insulin-Like Growth Factor II - genetics Meta-analysis Meta-Analysis as Topic Non- gestational diabetes mellitus Oral glucose tolerance test Polymorphism, Single Nucleotide Pregnancy Pregnant women Single nucleotide polymorphisms |
Title | Genetic confirmation of T2DM meta-analysis variants studied in gestational diabetes mellitus in an Indian population |
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