Chemical aspects of hydrogen sulfide measurements in physiological samples

Owing to recent discoveries of many hydrogen sulfide-mediated physiological processes, sulfide biology is in the focus of scientific research. However, the promiscuous chemical properties of sulfide pose complications for biological studies, which led to accumulation of controversial observations in...

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Published inBiochimica et biophysica acta Vol. 1840; no. 2; pp. 876 - 891
Main Authors Nagy, Péter, Pálinkás, Zoltán, Nagy, Attila, Budai, Barna, Tóth, Imre, Vasas, Anita
Format Journal Article
LanguageEnglish
Published Netherlands Elsevier B.V 01.02.2014
Subjects
Online AccessGet full text
ISSN0304-4165
0006-3002
1872-8006
DOI10.1016/j.bbagen.2013.05.037

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Abstract Owing to recent discoveries of many hydrogen sulfide-mediated physiological processes, sulfide biology is in the focus of scientific research. However, the promiscuous chemical properties of sulfide pose complications for biological studies, which led to accumulation of controversial observations in the literature. We intend to provide an overview of fundamental thermodynamic and kinetic features of sulfide redox- and coordination-chemical reactions and protonation equilibria in relation to its biological functions. In light of these chemical properties we review the strengths and limitations of the most commonly used sulfide detection methods and recently developed fluorescent probes. We also give a personal perspective on blood and tissue sulfide measurements based on proposed biomolecule–sulfide interactions and point out important chemical aspects of handling sulfide reagent solutions. The diverse chemistries of sulfide detection methods resulted in orders of magnitude differences in measured physiological sulfide levels. Investigations that were aimed to dissect the underlying molecular reasons responsible for these controversies made the important recognition that there are large sulfide reserves in biological systems. These sulfide pools are tightly regulated in a dynamic manner and they are likely to play a major role in regulation of endogenous-sulfide-mediated biological functions and avoiding toxic side effects. Working with sulfide is challenging, because it requires considerable amounts of chemical knowledge to adequately handle reagent sulfide solutions and interpret biological observations. Therefore, we propose that a rigorous chemical approach could aid the reconciliation of the increasing number of controversies in sulfide biology. This article is part of a Special Issue entitled Current methods to study reactive oxygen species - pros and cons and biophysics of membrane proteins. Guest Editor: Christine Winterbourn. •Chemical aspects of biologically relevant sulfide reactions are discussed.•The most frequently used detection methods are reviewed from a chemical perspective.•Advances on fluorescent probe development for sulfide detection are summarized.•A perspective is provided on controversial physiological sulfide measurements.•Practical advice is given to handle sulfide reagent solutions.
AbstractList Owing to recent discoveries of many hydrogen sulfide-mediated physiological processes, sulfide biology is in the focus of scientific research. However, the promiscuous chemical properties of sulfide pose complications for biological studies, which led to accumulation of controversial observations in the literature.We intend to provide an overview of fundamental thermodynamic and kinetic features of sulfide redox- and coordination-chemical reactions and protonation equilibria in relation to its biological functions. In light of these chemical properties we review the strengths and limitations of the most commonly used sulfide detection methods and recently developed fluorescent probes. We also give a personal perspective on blood and tissue sulfide measurements based on proposed biomolecule–sulfide interactions and point out important chemical aspects of handling sulfide reagent solutions.The diverse chemistries of sulfide detection methods resulted in orders of magnitude differences in measured physiological sulfide levels. Investigations that were aimed to dissect the underlying molecular reasons responsible for these controversies made the important recognition that there are large sulfide reserves in biological systems. These sulfide pools are tightly regulated in a dynamic manner and they are likely to play a major role in regulation of endogenous-sulfide-mediated biological functions and avoiding toxic side effects.Working with sulfide is challenging, because it requires considerable amounts of chemical knowledge to adequately handle reagent sulfide solutions and interpret biological observations. Therefore, we propose that a rigorous chemical approach could aid the reconciliation of the increasing number of controversies in sulfide biology. This article is part of a Special Issue entitled Current methods to study reactive oxygen species - pros and cons and biophysics of membrane proteins. Guest Editor: Christine Winterbourn.
Owing to recent discoveries of many hydrogen sulfide-mediated physiological processes, sulfide biology is in the focus of scientific research. However, the promiscuous chemical properties of sulfide pose complications for biological studies, which led to accumulation of controversial observations in the literature. We intend to provide an overview of fundamental thermodynamic and kinetic features of sulfide redox- and coordination-chemical reactions and protonation equilibria in relation to its biological functions. In light of these chemical properties we review the strengths and limitations of the most commonly used sulfide detection methods and recently developed fluorescent probes. We also give a personal perspective on blood and tissue sulfide measurements based on proposed biomolecule-sulfide interactions and point out important chemical aspects of handling sulfide reagent solutions. The diverse chemistries of sulfide detection methods resulted in orders of magnitude differences in measured physiological sulfide levels. Investigations that were aimed to dissect the underlying molecular reasons responsible for these controversies made the important recognition that there are large sulfide reserves in biological systems. These sulfide pools are tightly regulated in a dynamic manner and they are likely to play a major role in regulation of endogenous-sulfide-mediated biological functions and avoiding toxic side effects. Working with sulfide is challenging, because it requires considerable amounts of chemical knowledge to adequately handle reagent sulfide solutions and interpret biological observations. Therefore, we propose that a rigorous chemical approach could aid the reconciliation of the increasing number of controversies in sulfide biology. This article is part of a Special Issue entitled Current methods to study reactive oxygen species - pros and cons and biophysics of membrane proteins. Guest Editor: Christine Winterbourn.
Owing to recent discoveries of many hydrogen sulfide-mediated physiological processes, sulfide biology is in the focus of scientific research. However, the promiscuous chemical properties of sulfide pose complications for biological studies, which led to accumulation of controversial observations in the literature. We intend to provide an overview of fundamental thermodynamic and kinetic features of sulfide redox- and coordination-chemical reactions and protonation equilibria in relation to its biological functions. In light of these chemical properties we review the strengths and limitations of the most commonly used sulfide detection methods and recently developed fluorescent probes. We also give a personal perspective on blood and tissue sulfide measurements based on proposed biomolecule–sulfide interactions and point out important chemical aspects of handling sulfide reagent solutions. The diverse chemistries of sulfide detection methods resulted in orders of magnitude differences in measured physiological sulfide levels. Investigations that were aimed to dissect the underlying molecular reasons responsible for these controversies made the important recognition that there are large sulfide reserves in biological systems. These sulfide pools are tightly regulated in a dynamic manner and they are likely to play a major role in regulation of endogenous-sulfide-mediated biological functions and avoiding toxic side effects. Working with sulfide is challenging, because it requires considerable amounts of chemical knowledge to adequately handle reagent sulfide solutions and interpret biological observations. Therefore, we propose that a rigorous chemical approach could aid the reconciliation of the increasing number of controversies in sulfide biology. This article is part of a Special Issue entitled Current methods to study reactive oxygen species - pros and cons and biophysics of membrane proteins. Guest Editor: Christine Winterbourn. •Chemical aspects of biologically relevant sulfide reactions are discussed.•The most frequently used detection methods are reviewed from a chemical perspective.•Advances on fluorescent probe development for sulfide detection are summarized.•A perspective is provided on controversial physiological sulfide measurements.•Practical advice is given to handle sulfide reagent solutions.
Owing to recent discoveries of many hydrogen sulfide-mediated physiological processes, sulfide biology is in the focus of scientific research. However, the promiscuous chemical properties of sulfide pose complications for biological studies, which led to accumulation of controversial observations in the literature.BACKGROUNDOwing to recent discoveries of many hydrogen sulfide-mediated physiological processes, sulfide biology is in the focus of scientific research. However, the promiscuous chemical properties of sulfide pose complications for biological studies, which led to accumulation of controversial observations in the literature.We intend to provide an overview of fundamental thermodynamic and kinetic features of sulfide redox- and coordination-chemical reactions and protonation equilibria in relation to its biological functions. In light of these chemical properties we review the strengths and limitations of the most commonly used sulfide detection methods and recently developed fluorescent probes. We also give a personal perspective on blood and tissue sulfide measurements based on proposed biomolecule-sulfide interactions and point out important chemical aspects of handling sulfide reagent solutions.SCOPE OF REVIEWWe intend to provide an overview of fundamental thermodynamic and kinetic features of sulfide redox- and coordination-chemical reactions and protonation equilibria in relation to its biological functions. In light of these chemical properties we review the strengths and limitations of the most commonly used sulfide detection methods and recently developed fluorescent probes. We also give a personal perspective on blood and tissue sulfide measurements based on proposed biomolecule-sulfide interactions and point out important chemical aspects of handling sulfide reagent solutions.The diverse chemistries of sulfide detection methods resulted in orders of magnitude differences in measured physiological sulfide levels. Investigations that were aimed to dissect the underlying molecular reasons responsible for these controversies made the important recognition that there are large sulfide reserves in biological systems. These sulfide pools are tightly regulated in a dynamic manner and they are likely to play a major role in regulation of endogenous-sulfide-mediated biological functions and avoiding toxic side effects.MAJOR CONCLUSIONSThe diverse chemistries of sulfide detection methods resulted in orders of magnitude differences in measured physiological sulfide levels. Investigations that were aimed to dissect the underlying molecular reasons responsible for these controversies made the important recognition that there are large sulfide reserves in biological systems. These sulfide pools are tightly regulated in a dynamic manner and they are likely to play a major role in regulation of endogenous-sulfide-mediated biological functions and avoiding toxic side effects.Working with sulfide is challenging, because it requires considerable amounts of chemical knowledge to adequately handle reagent sulfide solutions and interpret biological observations. Therefore, we propose that a rigorous chemical approach could aid the reconciliation of the increasing number of controversies in sulfide biology. This article is part of a Special Issue entitled Current methods to study reactive oxygen species - pros and cons and biophysics of membrane proteins. Guest Editor: Christine Winterbourn.GENERAL SIGNIFICANCEWorking with sulfide is challenging, because it requires considerable amounts of chemical knowledge to adequately handle reagent sulfide solutions and interpret biological observations. Therefore, we propose that a rigorous chemical approach could aid the reconciliation of the increasing number of controversies in sulfide biology. This article is part of a Special Issue entitled Current methods to study reactive oxygen species - pros and cons and biophysics of membrane proteins. Guest Editor: Christine Winterbourn.
Author Budai, Barna
Nagy, Attila
Pálinkás, Zoltán
Nagy, Péter
Vasas, Anita
Tóth, Imre
Author_xml – sequence: 1
  givenname: Péter
  surname: Nagy
  fullname: Nagy, Péter
  email: peter.nagy@oncol.hu
  organization: Department of Molecular Immunology and Toxicology, National Institute of Oncology, Ráth György utca 7–9, Budapest 1122, Hungary
– sequence: 2
  givenname: Zoltán
  surname: Pálinkás
  fullname: Pálinkás, Zoltán
  organization: Department of Molecular Immunology and Toxicology, National Institute of Oncology, Ráth György utca 7–9, Budapest 1122, Hungary
– sequence: 3
  givenname: Attila
  surname: Nagy
  fullname: Nagy, Attila
  organization: Department of Molecular Immunology and Toxicology, National Institute of Oncology, Ráth György utca 7–9, Budapest 1122, Hungary
– sequence: 4
  givenname: Barna
  surname: Budai
  fullname: Budai, Barna
  organization: Department of Molecular Immunology and Toxicology, National Institute of Oncology, Ráth György utca 7–9, Budapest 1122, Hungary
– sequence: 5
  givenname: Imre
  surname: Tóth
  fullname: Tóth, Imre
  organization: Department of Inorganic and Analytical Chemistry, University of Debrecen, Egyetem tér 1, Debrecen 4010, Hungary
– sequence: 6
  givenname: Anita
  surname: Vasas
  fullname: Vasas, Anita
  organization: Department of Molecular Immunology and Toxicology, National Institute of Oncology, Ráth György utca 7–9, Budapest 1122, Hungary
BackLink https://www.ncbi.nlm.nih.gov/pubmed/23769856$$D View this record in MEDLINE/PubMed
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Fri Feb 23 02:32:42 EST 2024
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Issue 2
Keywords 3MST
DTT
HSOH
Tissue sulfide measurement
MBB
TRIS
SDB
Hydrogen sulfide
CSE
CBS
MB
Cys
GC
GSH
PBS
DTPA
DTNB
Protonation equilibria
CCO
Coordination chemistry
Blood sulfide pool
RSSH
HEPES
ROS
Redox chemistry
RSOH
cystathionine gamma-lyase
sulfenic acid
glutathione
4-(2-hydroxyethyl)-1-piperazineethane-sulfonic acid
cytochrome c oxidase
l-cysteine
d,l-dithiotreitol
3-mercaptopyruvate sulfurtransferase
gas chromatography
persulfide
sulfide dibimane
reactive oxygen species
methylene blue method
cystathionine beta-synthase
diethylenetriamine-pentaacetic-acid
tris(hydroxymethyl)aminomethane
sulfenic acid derivative
monobromobimane method
phosphate buffered saline
5,5-dithiobis-(2-nitrobenzoic acid)
Language English
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Snippet Owing to recent discoveries of many hydrogen sulfide-mediated physiological processes, sulfide biology is in the focus of scientific research. However, the...
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SubjectTerms Animals
biophysics
blood
Blood sulfide pool
Cell Physiological Phenomena
Coordination chemistry
Fluorescent Dyes
Humans
hydrogen
Hydrogen sulfide
Hydrogen Sulfide - analysis
membrane proteins
physicochemical properties
Protonation equilibria
reactive oxygen species
Redox chemistry
thermodynamics
Tissue sulfide measurement
toxicity
Title Chemical aspects of hydrogen sulfide measurements in physiological samples
URI https://dx.doi.org/10.1016/j.bbagen.2013.05.037
https://www.ncbi.nlm.nih.gov/pubmed/23769856
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