An Open-source Bayesian Atmospheric Radiative Transfer (BART) Code. I. Design, Tests, and Application to Exoplanet HD 189733b

We present the open-source Bayesian Atmospheric Radiative Transfer (BART) retrieval package, which produces estimates and uncertainties for an atmosphere’s thermal profile and chemical abundances from observations. Several BART components are also stand-alone packages, including the parallel Multi-C...

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Published inThe planetary science journal Vol. 3; no. 4; pp. 80 - 110
Main Authors Harrington, Joseph, Himes, Michael D., Cubillos, Patricio E., Blecic, Jasmina, Rojo, Patricio M., Challener, Ryan C., Lust, Nate B., Bowman, M. Oliver, Blumenthal, Sarah D., Dobbs-Dixon, Ian, Foster, Andrew S. D., Foster, Austin J., Green, M. R., Loredo, Thomas J., McIntyre, Kathleen J., Stemm, Madison M., Wright, David C.
Format Journal Article
LanguageEnglish
Published The American Astronomical Society 01.04.2022
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Online AccessGet full text
ISSN2632-3338
2632-3338
DOI10.3847/PSJ/ac3513

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Abstract We present the open-source Bayesian Atmospheric Radiative Transfer (BART) retrieval package, which produces estimates and uncertainties for an atmosphere’s thermal profile and chemical abundances from observations. Several BART components are also stand-alone packages, including the parallel Multi-Core Markov-chain Monte Carlo (MC3), which implements several Bayesian samplers; a line-by-line radiative-transfer model, transit ; a code that calculates Thermochemical Equilibrium Abundances (TEA), and a test suite for verifying radiative-transfer and retrieval codes, BARTT est . The codes are in Python and C. BART and TEA are under a Reproducible Research (RR) license, which requires reviewed-paper authors to publish a compendium of all inputs, codes, and outputs supporting the paper’s scientific claims. BART and TEA produce the compendium’s content. Otherwise, these codes are under permissive open-source terms, as are MC3 and BARTT est , for any purpose. This paper presents an overview of the code, BARTT est , and an application to eclipse data for exoplanet HD 189733b. Appendices address RR methodology for accelerating science, a reporting checklist for retrieval papers, the spectral resolution required for synthetic tests, and a derivation of the effective sample size required to estimate any Bayesian posterior distribution to a given precision, which determines how many iterations to run. Paper II, by Cubillos et al., presents the underlying radiative-transfer scheme and an application to transit data for exoplanet HAT-P-11b. Paper III, by Blecic et al., discusses the initialization and post-processing routines, with an application to eclipse data for exoplanet WASP-43b. We invite the community to use and improve BART and its components at http://GitHub.com/ExOSPORTS/BART/ .
AbstractList We present the open-source Bayesian Atmospheric Radiative Transfer (BART) retrieval package, which produces estimates and uncertainties for an atmosphere’s thermal profile and chemical abundances from observations. Several BART components are also stand-alone packages, including the parallel Multi-Core Markov-chain Monte Carlo (MC3), which implements several Bayesian samplers; a line-by-line radiative-transfer model, transit ; a code that calculates Thermochemical Equilibrium Abundances (TEA), and a test suite for verifying radiative-transfer and retrieval codes, BARTT est . The codes are in Python and C. BART and TEA are under a Reproducible Research (RR) license, which requires reviewed-paper authors to publish a compendium of all inputs, codes, and outputs supporting the paper’s scientific claims. BART and TEA produce the compendium’s content. Otherwise, these codes are under permissive open-source terms, as are MC3 and BARTT est , for any purpose. This paper presents an overview of the code, BARTT est , and an application to eclipse data for exoplanet HD 189733b. Appendices address RR methodology for accelerating science, a reporting checklist for retrieval papers, the spectral resolution required for synthetic tests, and a derivation of the effective sample size required to estimate any Bayesian posterior distribution to a given precision, which determines how many iterations to run. Paper II, by Cubillos et al., presents the underlying radiative-transfer scheme and an application to transit data for exoplanet HAT-P-11b. Paper III, by Blecic et al., discusses the initialization and post-processing routines, with an application to eclipse data for exoplanet WASP-43b. We invite the community to use and improve BART and its components at http://GitHub.com/ExOSPORTS/BART/ .
Author Dobbs-Dixon, Ian
Cubillos, Patricio E.
Bowman, M. Oliver
Loredo, Thomas J.
Stemm, Madison M.
Challener, Ryan C.
Blecic, Jasmina
Harrington, Joseph
Foster, Andrew S. D.
Rojo, Patricio M.
Foster, Austin J.
Green, M. R.
McIntyre, Kathleen J.
Blumenthal, Sarah D.
Lust, Nate B.
Himes, Michael D.
Wright, David C.
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  surname: Blumenthal
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  organization: University of Oxford Department of Physics, Oxford OX1 3PU, UK
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  surname: Green
  fullname: Green, M. R.
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  surname: Wright
  fullname: Wright, David C.
  organization: University of Central Florida Planetary Sciences Group, Department of Physics, Orlando, FL 32816-2385, USA
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SubjectTerms Astrostatistics techniques
Exoplanet atmospheric composition
Exoplanet systems
Open source software
Planetary atmospheres
Uncertainty bounds
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Title An Open-source Bayesian Atmospheric Radiative Transfer (BART) Code. I. Design, Tests, and Application to Exoplanet HD 189733b
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