Phylogenomic analyses provide insights into primate evolution

Comparative analysis of primate genomes within a phylogenetic context is essential for understanding the evolution of human genetic architecture and primate diversity. We present such a study of 50 primate species spanning 38 genera and 14 families, including 27 genomes first reported here, with man...

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Published inScience (American Association for the Advancement of Science) Vol. 380; no. 6648; pp. 913 - 924
Main Authors Shao, Yong, Zhou, Long, Li, Fang, Zhao, Lan, Zhang, Bao-Lin, Shao, Feng, Chen, Jia-Wei, Chen, Chun-Yan, Bi, Xupeng, Zhuang, Xiao-Lin, Zhu, Hong-Liang, Hu, Jiang, Sun, Zongyi, Li, Xin, Wang, Depeng, Rivas-González, Iker, Wang, Sheng, Wang, Yun-Mei, Chen, Wu, Li, Gang, Lu, Hui-Meng, Liu, Yang, Kuderna, Lukas F. K., Farh, Kyle Kai-How, Fan, Peng-Fei, Yu, Li, Li, Ming, Liu, Zhi-Jin, Tiley, George P., Yoder, Anne D., Roos, Christian, Hayakawa, Takashi, Marques-Bonet, Tomas, Rogers, Jeffrey, Stenson, Peter D., Cooper, David N., Schierup, Mikkel Heide, Yao, Yong-Gang, Zhang, Ya-Ping, Wang, Wen, Qi, Xiao-Guang, Zhang, Guojie, Wu, Dong-Dong
Format Journal Article
LanguageEnglish
Published United States The American Association for the Advancement of Science 02.06.2023
Subjects
Animals
Brain - anatomy & histology
Evolution, Molecular
Gene Rearrangement
Genome
Genomics
Humans
Phylogeny
Primates - anatomy & histology
Primates - classification
Primates - genetics
Online AccessGet full text
ISSN0036-8075
1095-9203
1095-9203
DOI10.1126/science.abn6919

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Abstract Comparative analysis of primate genomes within a phylogenetic context is essential for understanding the evolution of human genetic architecture and primate diversity. We present such a study of 50 primate species spanning 38 genera and 14 families, including 27 genomes first reported here, with many from previously less well represented groups, the New World monkeys and the Strepsirrhini. Our analyses reveal heterogeneous rates of genomic rearrangement and gene evolution across primate lineages. Thousands of genes under positive selection in different lineages play roles in the nervous, skeletal, and digestive systems and may have contributed to primate innovations and adaptations. Our study reveals that many key genomic innovations occurred in the Simiiformes ancestral node and may have had an impact on the adaptive radiation of the Simiiformes and human evolution.
AbstractList Comparative analysis of primate genomes within a phylogenetic context is essential for understanding the evolution of human genetic architecture and primate diversity. We present such a study of 50 primate species spanning 38 genera and 14 families, including 27 genomes first reported here, with many from previously less well represented groups, the New World monkeys and the Strepsirrhini. Our analyses reveal heterogeneous rates of genomic rearrangement and gene evolution across primate lineages. Thousands of genes under positive selection in different lineages play roles in the nervous, skeletal, and digestive systems and may have contributed to primate innovations and adaptations. Our study reveals that many key genomic innovations occurred in the Simiiformes ancestral node and may have had an impact on the adaptive radiation of the Simiiformes and human evolution.
Comparative analysis of primate genomes within a phylogenetic context is essential for understanding the evolution of human genetic architecture and primate diversity. We present such a study of 50 primate species spanning 38 genera and 14 families, including 27 genomes first reported here, with many from previously less well represented groups, the New World monkeys and the Strepsirrhini. Our analyses reveal heterogeneous rates of genomic rearrangement and gene evolution across primate lineages. Thousands of genes under positive selection in different lineages play roles in the nervous, skeletal, and digestive systems and may have contributed to primate innovations and adaptations. Our study reveals that many key genomic innovations occurred in the Simiiformes ancestral node and may have had an impact on the adaptive radiation of the Simiiformes and human evolution.Comparative analysis of primate genomes within a phylogenetic context is essential for understanding the evolution of human genetic architecture and primate diversity. We present such a study of 50 primate species spanning 38 genera and 14 families, including 27 genomes first reported here, with many from previously less well represented groups, the New World monkeys and the Strepsirrhini. Our analyses reveal heterogeneous rates of genomic rearrangement and gene evolution across primate lineages. Thousands of genes under positive selection in different lineages play roles in the nervous, skeletal, and digestive systems and may have contributed to primate innovations and adaptations. Our study reveals that many key genomic innovations occurred in the Simiiformes ancestral node and may have had an impact on the adaptive radiation of the Simiiformes and human evolution.
Author Wang, Depeng
Shao, Yong
Li, Ming
Qi, Xiao-Guang
Hu, Jiang
Sun, Zongyi
Zhang, Bao-Lin
Li, Gang
Zhang, Guojie
Rogers, Jeffrey
Wang, Wen
Yao, Yong-Gang
Li, Xin
Hayakawa, Takashi
Chen, Wu
Shao, Feng
Zhu, Hong-Liang
Lu, Hui-Meng
Liu, Zhi-Jin
Yoder, Anne D.
Marques-Bonet, Tomas
Chen, Jia-Wei
Zhao, Lan
Kuderna, Lukas F. K.
Li, Fang
Chen, Chun-Yan
Yu, Li
Roos, Christian
Liu, Yang
Zhuang, Xiao-Lin
Bi, Xupeng
Fan, Peng-Fei
Wang, Sheng
Zhou, Long
Wu, Dong-Dong
Rivas-González, Iker
Farh, Kyle Kai-How
Wang, Yun-Mei
Tiley, George P.
Zhang, Ya-Ping
Stenson, Peter D.
Cooper, David N.
Schierup, Mikkel Heide
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BackLink https://www.ncbi.nlm.nih.gov/pubmed/37262173$$D View this record in MEDLINE/PubMed
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Snippet Comparative analysis of primate genomes within a phylogenetic context is essential for understanding the evolution of human genetic architecture and primate...
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StartPage 913
SubjectTerms Animals
Brain - anatomy & histology
Evolution, Molecular
Gene Rearrangement
Genome
Genomics
Humans
Phylogeny
Primates - anatomy & histology
Primates - classification
Primates - genetics
Title Phylogenomic analyses provide insights into primate evolution
URI https://www.ncbi.nlm.nih.gov/pubmed/37262173
https://www.proquest.com/docview/2821377161
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